RNA–Protein interactions for RNA: ENST00000523263.1

VIRMA-208, Transcript of vir like m6A methyltransferase associated, humanhuman

TSL 3

Gene VIRMA, Length 609 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIRMA-208ENST00000523263 ERO1BQ86YB8 467 aa12.04□□□□□ -0.48
VIRMA-208ENST00000523263 TDRD3Q9H7E2 651 aaKnown RBP12.04□□□□□ -0.48
VIRMA-208ENST00000523263 TTF2Q9UNY4 1162 aaKnown RBP12.04□□□□□ -0.48
VIRMA-208ENST00000523263 KIAA0100Q14667 2235 aaKnown RBP12.04□□□□□ -0.48
VIRMA-208ENST00000523263 HTTP42858 3142 aa12.04□□□□□ -0.48
VIRMA-208ENST00000523263 DDX10Q13206 875 aaKnown RBP12.03□□□□□ -0.48
VIRMA-208ENST00000523263 FKBP1CQ5VVH2 108 aa12.03□□□□□ -0.48
VIRMA-208ENST00000523263 LDHAL6AQ6ZMR3 332 aa12.03□□□□□ -0.48
VIRMA-208ENST00000523263 UBE2Q1Q7Z7E8 422 aa12.03□□□□□ -0.48
VIRMA-208ENST00000523263 CNKSR2Q8WXI2 1034 aa12.03□□□□□ -0.48
VIRMA-208ENST00000523263 HOOK2Q96ED9 719 aa12.03□□□□□ -0.48
VIRMA-208ENST00000523263 PRO3102Q9H379 93 aa12.03□□□□□ -0.48
VIRMA-208ENST00000523263 PRKRIP1Q9H875 184 aaPredicted RBP12.03□□□□□ -0.48
VIRMA-208ENST00000523263 IL16Q14005 1332 aa12.03□□□□□ -0.48
VIRMA-208ENST00000523263 MYH3P11055 1940 aa12.03□□□□□ -0.48
VIRMA-208ENST00000523263 BTBD19C9JJ37 291 aa12.02□□□□□ -0.49
VIRMA-208ENST00000523263 HOXD10P28358 340 aa12.02□□□□□ -0.49
VIRMA-208ENST00000523263 HIBADHP31937 336 aaKnown RBP12.02□□□□□ -0.49
VIRMA-208ENST00000523263 CRKP46108 304 aa12.02□□□□□ -0.49
VIRMA-208ENST00000523263 FKBP5Q13451 457 aaPredicted RBP12.02□□□□□ -0.49
VIRMA-208ENST00000523263 SNAPC2Q13487 334 aa12.02□□□□□ -0.49
VIRMA-208ENST00000523263 CCDC57Q2TAC2 916 aa12.02□□□□□ -0.49
VIRMA-208ENST00000523263 C17orf99Q6UX52 265 aa12.02□□□□□ -0.49
VIRMA-208ENST00000523263 FAM83AQ86UY5 434 aa12.02□□□□□ -0.49
VIRMA-208ENST00000523263 CDAN1Q8IWY9 1227 aa12.02□□□□□ -0.49
VIRMA-208ENST00000523263 SH3TC2Q8TF17 1288 aa12.02□□□□□ -0.49
VIRMA-208ENST00000523263 TSR2Q969E8 191 aaKnown RBP12.02□□□□□ -0.49
VIRMA-208ENST00000523263 FAM84BQ96KN1 310 aaPredicted RBP12.02□□□□□ -0.49
VIRMA-208ENST00000523263 TMEM39BQ9GZU3 492 aa12.02□□□□□ -0.49
VIRMA-208ENST00000523263 SNCAIPQ9Y6H5 919 aa12.02□□□□□ -0.49
VIRMA-208ENST00000523263 A0A1W2PPC1 479 aa12.01□□□□□ -0.49
VIRMA-208ENST00000523263 TCP10L2B9ZVM9 353 aa12.01□□□□□ -0.49
VIRMA-208ENST00000523263 GJA8P48165 433 aa12.01□□□□□ -0.49
VIRMA-208ENST00000523263 PPIL2Q13356 520 aa12.01□□□□□ -0.49
VIRMA-208ENST00000523263 BEND3Q5T5X7 828 aa12.01□□□□□ -0.49
VIRMA-208ENST00000523263 LMBR1LQ6UX01 489 aa12.01□□□□□ -0.49
VIRMA-208ENST00000523263 CHRDL2Q6WN34 429 aa12.01□□□□□ -0.49
VIRMA-208ENST00000523263 SHISA4Q96DD7 197 aa12.01□□□□□ -0.49
VIRMA-208ENST00000523263 HTATIP2Q9BUP3 242 aa12.01□□□□□ -0.49
VIRMA-208ENST00000523263 ARHGAP39Q9C0H5 1083 aa12.01□□□□□ -0.49
VIRMA-208ENST00000523263 RBM27Q9P2N5 1060 aaKnown RBP12.01□□□□□ -0.49
VIRMA-208ENST00000523263 SRRDQ9UH36 339 aa12.01□□□□□ -0.49
VIRMA-208ENST00000523263 ECM29Q5VYK3 1845 aa12.01□□□□□ -0.49
VIRMA-208ENST00000523263 IRF6O14896 467 aa12□□□□□ -0.49
VIRMA-208ENST00000523263 GJB1P08034 283 aa12□□□□□ -0.49
VIRMA-208ENST00000523263 PPATQ06203 517 aa12□□□□□ -0.49
VIRMA-208ENST00000523263 FBXO33Q7Z6M2 555 aa12□□□□□ -0.49
VIRMA-208ENST00000523263 ANKRD23Q86SG2 305 aa12□□□□□ -0.49
VIRMA-208ENST00000523263 WWC1Q8IX03 1113 aa12□□□□□ -0.49
VIRMA-208ENST00000523263 TBC1D22AQ8WUA7 517 aa12□□□□□ -0.49
VIRMA-208ENST00000523263 CNNM1Q9NRU3 951 aa12□□□□□ -0.49
VIRMA-208ENST00000523263 JAG2Q9Y219 1238 aa12□□□□□ -0.49
VIRMA-208ENST00000523263 SUGT1Q9Y2Z0 365 aa12□□□□□ -0.49
VIRMA-208ENST00000523263 MKI67P46013 3256 aaKnown RBP12□□□□□ -0.49
VIRMA-208ENST00000523263 GRK4P32298 578 aa11.99□□□□□ -0.49
VIRMA-208ENST00000523263 MTFR1Q15390 333 aa11.99□□□□□ -0.49
VIRMA-208ENST00000523263 TAF7LQ5H9L4 462 aa11.99□□□□□ -0.49
VIRMA-208ENST00000523263 DCAF15Q66K64 600 aa11.99□□□□□ -0.49
VIRMA-208ENST00000523263 DPF3Q92784 378 aa11.99□□□□□ -0.49
VIRMA-208ENST00000523263 ZNF594Q96JF6 807 aaPredicted RBP11.99□□□□□ -0.49
VIRMA-208ENST00000523263 ZDHHC15Q96MV8 337 aa11.99□□□□□ -0.49
VIRMA-208ENST00000523263 CHMP3Q9Y3E7 222 aa11.99□□□□□ -0.49
VIRMA-208ENST00000523263 NR2E3Q9Y5X4 410 aa11.99□□□□□ -0.49
VIRMA-208ENST00000523263 RPAP1Q9BWH6 1393 aaPredicted RBP11.99□□□□□ -0.49
VIRMA-208ENST00000523263 SPEF2Q9C093 1822 aa11.98□□□□□ -0.49
VIRMA-208ENST00000523263 ADGRA2Q96PE1 1338 aa11.98□□□□□ -0.49
VIRMA-208ENST00000523263 PLIN1O60240 522 aa11.98□□□□□ -0.49
VIRMA-208ENST00000523263 VAMP4O75379 141 aa11.98□□□□□ -0.49
VIRMA-208ENST00000523263 PSMC4P43686 418 aa11.98□□□□□ -0.49
VIRMA-208ENST00000523263 GYG1P46976 350 aa11.98□□□□□ -0.49
VIRMA-208ENST00000523263 EPHA10Q5JZY3 1008 aa11.98□□□□□ -0.49
VIRMA-208ENST00000523263 TEKT1Q969V4 418 aa11.98□□□□□ -0.49
VIRMA-208ENST00000523263 TRIM47Q96LD4 638 aa11.98□□□□□ -0.49
VIRMA-208ENST00000523263 WRNIP1Q96S55 665 aa11.98□□□□□ -0.49
VIRMA-208ENST00000523263 ZNF112Q9UJU3 913 aa11.98□□□□□ -0.49
VIRMA-208ENST00000523263 KCNH4Q9UQ05 1017 aa11.98□□□□□ -0.49
VIRMA-208ENST00000523263 RIPOR2Q9Y4F9 1068 aa11.98□□□□□ -0.49
VIRMA-208ENST00000523263 MROH5Q6ZUA9 1318 aa11.97□□□□□ -0.49
VIRMA-208ENST00000523263 GRM8O00222 908 aa11.97□□□□□ -0.49
VIRMA-208ENST00000523263 ALDH1L1O75891 902 aa11.97□□□□□ -0.49
VIRMA-208ENST00000523263 OSBPP22059 807 aa11.97□□□□□ -0.49
VIRMA-208ENST00000523263 CTGFP29279 349 aa11.97□□□□□ -0.49
VIRMA-208ENST00000523263 UBXN2AP68543 259 aa11.97□□□□□ -0.49
VIRMA-208ENST00000523263 APOBEC3HQ6NTF7 200 aaKnown RBP11.97□□□□□ -0.49
VIRMA-208ENST00000523263 HHIPL2Q6UWX4 724 aa11.97□□□□□ -0.49
VIRMA-208ENST00000523263 ZKSCAN4Q969J2 545 aaPredicted RBP11.97□□□□□ -0.49
VIRMA-208ENST00000523263 ZNF341Q9BYN7 854 aa11.97□□□□□ -0.49
VIRMA-208ENST00000523263 TMOD2Q9NZR1 351 aa11.97□□□□□ -0.49
VIRMA-208ENST00000523263 OTOFQ9HC10 1997 aa11.96□□□□□ -0.49
VIRMA-208ENST00000523263 MAST3O60307 1309 aa11.96□□□□□ -0.49
VIRMA-208ENST00000523263 ZBTB7BO15156 539 aaPredicted RBP11.96□□□□□ -0.49
VIRMA-208ENST00000523263 MYCP01106 439 aaPredicted RBP11.96□□□□□ -0.49
VIRMA-208ENST00000523263 CCL5P13501 91 aa11.96□□□□□ -0.49
VIRMA-208ENST00000523263 GRIK5Q16478 980 aa11.96□□□□□ -0.49
VIRMA-208ENST00000523263 RAET1EQ8TD07 263 aa11.96□□□□□ -0.49
VIRMA-208ENST00000523263 MYPNQ86TC9 1320 aa11.95□□□□□ -0.5
VIRMA-208ENST00000523263 KIF16BQ96L93 1317 aa11.95□□□□□ -0.5
VIRMA-208ENST00000523263 PDHXO00330 501 aa11.95□□□□□ -0.5
VIRMA-208ENST00000523263 DLL1O00548 723 aa11.95□□□□□ -0.5
VIRMA-208ENST00000523263 FMNL1O95466 1100 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms