RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 IRS2Q9Y4H2 1338 aa17.97■□□□□ 0.47
NKX3-1-202ENST00000523261 FKBP1AP62942 108 aaKnown RBP17.96■□□□□ 0.47
NKX3-1-202ENST00000523261 SPDYE2Q495Y8 402 aa17.96■□□□□ 0.47
NKX3-1-202ENST00000523261 DUSP27Q5VZP5 1158 aa17.96■□□□□ 0.47
NKX3-1-202ENST00000523261 ZNF70Q9UC06 446 aaPredicted RBP17.96■□□□□ 0.47
NKX3-1-202ENST00000523261 LAS1LQ9Y4W2 734 aaKnown RBP17.96■□□□□ 0.47
NKX3-1-202ENST00000523261 SPTBN5Q9NRC6 3674 aaKnown RBP17.95■□□□□ 0.46
NKX3-1-202ENST00000523261 ARAP2Q8WZ64 1704 aa17.95■□□□□ 0.46
NKX3-1-202ENST00000523261 FMNL1O95466 1100 aaPredicted RBP17.95■□□□□ 0.46
NKX3-1-202ENST00000523261 RBM5P52756 815 aaKnown RBP eCLIP17.95■□□□□ 0.46
NKX3-1-202ENST00000523261 METTL22Q9BUU2 404 aaPredicted RBP17.95■□□□□ 0.46
NKX3-1-202ENST00000523261 SNCAIPQ9Y6H5 919 aa17.95■□□□□ 0.46
NKX3-1-202ENST00000523261 ADGRA2Q96PE1 1338 aa17.95■□□□□ 0.46
NKX3-1-202ENST00000523261 IRF6O14896 467 aa17.94■□□□□ 0.46
NKX3-1-202ENST00000523261 IGHMBP2P38935 993 aaKnown RBP17.94■□□□□ 0.46
NKX3-1-202ENST00000523261 BCAMP50895 628 aa17.94■□□□□ 0.46
NKX3-1-202ENST00000523261 SNAPC2Q13487 334 aa17.94■□□□□ 0.46
NKX3-1-202ENST00000523261 ERO1BQ86YB8 467 aa17.94■□□□□ 0.46
NKX3-1-202ENST00000523261 TMEM39BQ9GZU3 492 aa17.94■□□□□ 0.46
NKX3-1-202ENST00000523261 PRDM6Q9NQX0 595 aa17.94■□□□□ 0.46
NKX3-1-202ENST00000523261 SNAP23O00161 211 aa17.93■□□□□ 0.46
NKX3-1-202ENST00000523261 IL1R1P14778 569 aa17.93■□□□□ 0.46
NKX3-1-202ENST00000523261 KCNJ4P48050 445 aa17.93■□□□□ 0.46
NKX3-1-202ENST00000523261 PRKCZQ05513 592 aa17.93■□□□□ 0.46
NKX3-1-202ENST00000523261 SLAIN1Q8ND83 568 aa17.93■□□□□ 0.46
NKX3-1-202ENST00000523261 CAPN2P17655 700 aa17.92■□□□□ 0.46
NKX3-1-202ENST00000523261 PPIL2Q13356 520 aa17.92■□□□□ 0.46
NKX3-1-202ENST00000523261 C15orf52Q6ZUT6 534 aaKnown RBP17.92■□□□□ 0.46
NKX3-1-202ENST00000523261 TDRD3Q9H7E2 651 aaKnown RBP17.92■□□□□ 0.46
NKX3-1-202ENST00000523261 TFRCP02786 760 aaKnown RBP17.91■□□□□ 0.46
NKX3-1-202ENST00000523261 CHRNDQ07001 517 aa17.91■□□□□ 0.46
NKX3-1-202ENST00000523261 PAWRQ96IZ0 340 aaKnown RBP17.91■□□□□ 0.46
NKX3-1-202ENST00000523261 ZMYND8Q9ULU4 1186 aaPredicted RBP17.91■□□□□ 0.46
NKX3-1-202ENST00000523261 JAG2Q9Y219 1238 aa17.91■□□□□ 0.46
NKX3-1-202ENST00000523261 TCP10L2B9ZVM9 353 aa17.9■□□□□ 0.46
NKX3-1-202ENST00000523261 IGKV5-2P06315 115 aa17.9■□□□□ 0.46
NKX3-1-202ENST00000523261 TDHQ8IZJ6 230 aa17.9■□□□□ 0.46
NKX3-1-202ENST00000523261 DEFB118Q96PH6 123 aa17.9■□□□□ 0.46
NKX3-1-202ENST00000523261 MPHOSPH8Q99549 860 aa17.9■□□□□ 0.46
NKX3-1-202ENST00000523261 GABRQQ9UN88 632 aa17.9■□□□□ 0.46
NKX3-1-202ENST00000523261 TRIM35Q9UPQ4 493 aa17.9■□□□□ 0.46
NKX3-1-202ENST00000523261 TTC28Q96AY4 2481 aa17.9■□□□□ 0.46
NKX3-1-202ENST00000523261 MGAMO43451 1857 aa17.89■□□□□ 0.45
NKX3-1-202ENST00000523261 ITGA6P23229 1130 aa17.89■□□□□ 0.45
NKX3-1-202ENST00000523261 NEUROD2Q15784 382 aa17.89■□□□□ 0.45
NKX3-1-202ENST00000523261 ANKRD23Q86SG2 305 aa17.89■□□□□ 0.45
NKX3-1-202ENST00000523261 C7orf61Q8IZ16 206 aa17.89■□□□□ 0.45
NKX3-1-202ENST00000523261 ZKSCAN4Q969J2 545 aaPredicted RBP17.89■□□□□ 0.45
NKX3-1-202ENST00000523261 CRISPLD2Q9H0B8 497 aa17.89■□□□□ 0.45
NKX3-1-202ENST00000523261 SERPINA10Q9UK55 444 aa17.89■□□□□ 0.45
NKX3-1-202ENST00000523261 RPTORQ8N122 1335 aa17.89■□□□□ 0.45
NKX3-1-202ENST00000523261 PDHXO00330 501 aa17.88■□□□□ 0.45
NKX3-1-202ENST00000523261 ADCY3O60266 1144 aa17.88■□□□□ 0.45
NKX3-1-202ENST00000523261 INHAP05111 366 aa17.88■□□□□ 0.45
NKX3-1-202ENST00000523261 MAGEA10P43363 369 aaPredicted RBP17.88■□□□□ 0.45
NKX3-1-202ENST00000523261 TNNI2P48788 182 aa17.88■□□□□ 0.45
NKX3-1-202ENST00000523261 ZNF804AQ7Z570 1209 aa17.88■□□□□ 0.45
NKX3-1-202ENST00000523261 DZIP1LQ8IYY4 767 aaKnown RBP17.88■□□□□ 0.45
NKX3-1-202ENST00000523261 DIS3LQ8TF46 1054 aaKnown RBP17.88■□□□□ 0.45
NKX3-1-202ENST00000523261 WRNIP1Q96S55 665 aa17.88■□□□□ 0.45
NKX3-1-202ENST00000523261 PAK6Q9NQU5 681 aaPredicted RBP17.88■□□□□ 0.45
NKX3-1-202ENST00000523261 MAP3K2Q9Y2U5 619 aa17.88■□□□□ 0.45
NKX3-1-202ENST00000523261 A0A1B0GUL6 1792 aa17.87■□□□□ 0.45
NKX3-1-202ENST00000523261 TAF5LO75529 589 aa17.87■□□□□ 0.45
NKX3-1-202ENST00000523261 DDX58O95786 925 aaKnown RBP17.87■□□□□ 0.45
NKX3-1-202ENST00000523261 BCRP11274 1271 aa17.87■□□□□ 0.45
NKX3-1-202ENST00000523261 ELNP15502 786 aa17.87■□□□□ 0.45
NKX3-1-202ENST00000523261 FCGRTP55899 365 aa17.87■□□□□ 0.45
NKX3-1-202ENST00000523261 NECAB2Q7Z6G3 386 aa17.87■□□□□ 0.45
NKX3-1-202ENST00000523261 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.87■□□□□ 0.45
NKX3-1-202ENST00000523261 PPATQ06203 517 aa17.86■□□□□ 0.45
NKX3-1-202ENST00000523261 GUCD1Q96NT3 240 aa17.86■□□□□ 0.45
NKX3-1-202ENST00000523261 TTF2Q9UNY4 1162 aaKnown RBP17.86■□□□□ 0.45
NKX3-1-202ENST00000523261 H7C1W4 665 aa17.85■□□□□ 0.45
NKX3-1-202ENST00000523261 SYN1P17600 705 aa17.85■□□□□ 0.45
NKX3-1-202ENST00000523261 MOGSQ13724 837 aa17.85■□□□□ 0.45
NKX3-1-202ENST00000523261 FAM205AQ6ZU69 1335 aa17.85■□□□□ 0.45
NKX3-1-202ENST00000523261 UBE3BQ7Z3V4 1068 aa17.85■□□□□ 0.45
NKX3-1-202ENST00000523261 MBIPQ9NS73 344 aa17.85■□□□□ 0.45
NKX3-1-202ENST00000523261 FLT3LGP49771 235 aa17.84■□□□□ 0.45
NKX3-1-202ENST00000523261 CWF19L2Q2TBE0 894 aaKnown RBP17.84■□□□□ 0.45
NKX3-1-202ENST00000523261 MFSD14BQ5SR56 506 aa17.84■□□□□ 0.45
NKX3-1-202ENST00000523261 PXYLP1Q8TE99 480 aa17.84■□□□□ 0.45
NKX3-1-202ENST00000523261 PLA2G12BQ9BX93 195 aa17.84■□□□□ 0.45
NKX3-1-202ENST00000523261 UBE2OQ9C0C9 1292 aaKnown RBP17.84■□□□□ 0.45
NKX3-1-202ENST00000523261 KCNH4Q9UQ05 1017 aa17.84■□□□□ 0.45
NKX3-1-202ENST00000523261 EYSQ5T1H1 3165 aa17.84■□□□□ 0.45
NKX3-1-202ENST00000523261 CSF1RP07333 972 aa17.83■□□□□ 0.44
NKX3-1-202ENST00000523261 CRKP46108 304 aa17.83■□□□□ 0.44
NKX3-1-202ENST00000523261 FAM109BQ6ICB4 259 aaPredicted RBP17.83■□□□□ 0.44
NKX3-1-202ENST00000523261 KSR2Q6VAB6 950 aa17.83■□□□□ 0.44
NKX3-1-202ENST00000523261 PI4KAP2A4QPH2 592 aa17.82■□□□□ 0.44
NKX3-1-202ENST00000523261 NEURL1BA8MQ27 555 aa17.82■□□□□ 0.44
NKX3-1-202ENST00000523261 POTEB2H3BUK9 544 aa17.82■□□□□ 0.44
NKX3-1-202ENST00000523261 ELL2O00472 640 aaPredicted RBP17.82■□□□□ 0.44
NKX3-1-202ENST00000523261 IRF5Q13568 498 aa17.82■□□□□ 0.44
NKX3-1-202ENST00000523261 PI4KAP1Q8N8J0 262 aa17.82■□□□□ 0.44
NKX3-1-202ENST00000523261 ANKLE1Q8NAG6 615 aa17.82■□□□□ 0.44
NKX3-1-202ENST00000523261 PARK7Q99497 189 aaKnown RBP17.82■□□□□ 0.44
NKX3-1-202ENST00000523261 CYP2C8P10632 490 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms