RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 CARMIL3Q8ND23 1372 aa8.37□□□□□ -1.07
PABPC1-220ENST00000522658 MYH14Q7Z406 1995 aaKnown RBP8.37□□□□□ -1.07
PABPC1-220ENST00000522658 CLSPNQ9HAW4 1339 aa8.37□□□□□ -1.07
PABPC1-220ENST00000522658 IQCA1LA6NCM1 817 aa8.37□□□□□ -1.07
PABPC1-220ENST00000522658 ZBBXA8MT70 800 aa8.37□□□□□ -1.07
PABPC1-220ENST00000522658 RNMTO43148 476 aaKnown RBP8.37□□□□□ -1.07
PABPC1-220ENST00000522658 HMOX1P09601 288 aa8.37□□□□□ -1.07
PABPC1-220ENST00000522658 SLC39A6Q13433 755 aa8.37□□□□□ -1.07
PABPC1-220ENST00000522658 INTS5Q6P9B9 1019 aaKnown RBP8.37□□□□□ -1.07
PABPC1-220ENST00000522658 CNBD1Q8NA66 436 aa8.37□□□□□ -1.07
PABPC1-220ENST00000522658 TAOK3Q9H2K8 898 aa8.37□□□□□ -1.07
PABPC1-220ENST00000522658 CYLDQ9NQC7 956 aa8.37□□□□□ -1.07
PABPC1-220ENST00000522658 MRC1P22897 1456 aa8.37□□□□□ -1.07
PABPC1-220ENST00000522658 RNF225M0QZC1 329 aaPredicted RBP8.36□□□□□ -1.07
PABPC1-220ENST00000522658 HSPA5P11021 654 aaKnown RBP8.36□□□□□ -1.07
PABPC1-220ENST00000522658 CYP19A1P11511 503 aaPredicted RBP8.36□□□□□ -1.07
PABPC1-220ENST00000522658 TM4SF1P30408 202 aa8.36□□□□□ -1.07
PABPC1-220ENST00000522658 GAS6Q14393 721 aa8.36□□□□□ -1.07
PABPC1-220ENST00000522658 TMEM151AQ8N4L1 468 aa8.36□□□□□ -1.07
PABPC1-220ENST00000522658 PCGF6Q9BYE7 350 aa8.36□□□□□ -1.07
PABPC1-220ENST00000522658 DLEC1Q9Y238 1755 aa8.35□□□□□ -1.07
PABPC1-220ENST00000522658 U2SURPO15042 1029 aaKnown RBP8.35□□□□□ -1.07
PABPC1-220ENST00000522658 C21orf2O43822 256 aa8.35□□□□□ -1.07
PABPC1-220ENST00000522658 DIAPH1O60610 1272 aaKnown RBP8.35□□□□□ -1.07
PABPC1-220ENST00000522658 GDF11O95390 407 aa8.35□□□□□ -1.07
PABPC1-220ENST00000522658 FBXO45P0C2W1 286 aa8.35□□□□□ -1.07
PABPC1-220ENST00000522658 GAS2L2Q8NHY3 880 aa8.35□□□□□ -1.07
PABPC1-220ENST00000522658 CNKSR1Q969H4 720 aa8.35□□□□□ -1.07
PABPC1-220ENST00000522658 PCMTD1Q96MG8 357 aaPredicted RBP8.35□□□□□ -1.07
PABPC1-220ENST00000522658 SETDB2Q96T68 719 aa8.35□□□□□ -1.07
PABPC1-220ENST00000522658 TEX13AQ9BXU3 409 aaPredicted RBP8.35□□□□□ -1.07
PABPC1-220ENST00000522658 ZNF652Q9Y2D9 606 aa8.35□□□□□ -1.07
PABPC1-220ENST00000522658 SBF1O95248 1867 aa8.34□□□□□ -1.07
PABPC1-220ENST00000522658 SCN7AQ01118 1682 aa8.34□□□□□ -1.07
PABPC1-220ENST00000522658 AFDNP55196 1824 aaKnown RBP8.34□□□□□ -1.07
PABPC1-220ENST00000522658 NFKBIEO00221 500 aa8.34□□□□□ -1.07
PABPC1-220ENST00000522658 GPC1P35052 558 aa8.34□□□□□ -1.07
PABPC1-220ENST00000522658 IL13P35225 146 aa8.34□□□□□ -1.07
PABPC1-220ENST00000522658 SRSF11Q05519 484 aaKnown RBP8.34□□□□□ -1.07
PABPC1-220ENST00000522658 EAPPQ56P03 285 aaPredicted RBP8.34□□□□□ -1.07
PABPC1-220ENST00000522658 FMNL2Q96PY5 1086 aa8.34□□□□□ -1.07
PABPC1-220ENST00000522658 BRIP1Q9BX63 1249 aa8.34□□□□□ -1.07
PABPC1-220ENST00000522658 LGR6Q9HBX8 967 aa8.34□□□□□ -1.07
PABPC1-220ENST00000522658 MKRN1Q9UHC7 482 aaKnown RBP8.34□□□□□ -1.07
PABPC1-220ENST00000522658 NRXN2Q9P2S2 1712 aa8.34□□□□□ -1.07
PABPC1-220ENST00000522658 ATP5J2-PTCD1G3V325 749 aa8.33□□□□□ -1.08
PABPC1-220ENST00000522658 GTF2E1P29083 439 aaPredicted RBP8.33□□□□□ -1.08
PABPC1-220ENST00000522658 ERVK-9P63128 1117 aa8.33□□□□□ -1.08
PABPC1-220ENST00000522658 CNGB1Q14028 1251 aaPredicted RBP8.33□□□□□ -1.08
PABPC1-220ENST00000522658 CCDC93Q567U6 631 aa8.33□□□□□ -1.08
PABPC1-220ENST00000522658 LYPD4Q6UWN0 246 aa8.33□□□□□ -1.08
PABPC1-220ENST00000522658 PRICKLE2Q7Z3G6 844 aa8.33□□□□□ -1.08
PABPC1-220ENST00000522658 GPR37L1O60883 481 aa8.32□□□□□ -1.08
PABPC1-220ENST00000522658 RHOQP17081 205 aa8.32□□□□□ -1.08
PABPC1-220ENST00000522658 SUZ12Q15022 739 aaKnown RBP8.32□□□□□ -1.08
PABPC1-220ENST00000522658 MTHFSDQ2M296 383 aaKnown RBP8.32□□□□□ -1.08
PABPC1-220ENST00000522658 TBC1D9BQ66K14 1250 aa8.32□□□□□ -1.08
PABPC1-220ENST00000522658 PRPF40BQ6NWY9 871 aaKnown RBP8.32□□□□□ -1.08
PABPC1-220ENST00000522658 LDHDQ86WU2 507 aa8.32□□□□□ -1.08
PABPC1-220ENST00000522658 NBPF5PQ86XG9 351 aaPredicted RBP8.32□□□□□ -1.08
PABPC1-220ENST00000522658 RTF1Q92541 710 aaKnown RBP8.32□□□□□ -1.08
PABPC1-220ENST00000522658 ZNF837Q96EG3 531 aaPredicted RBP8.32□□□□□ -1.08
PABPC1-220ENST00000522658 MASTLQ96GX5 879 aa8.32□□□□□ -1.08
PABPC1-220ENST00000522658 TBC1D2BQ9UPU7 963 aa8.32□□□□□ -1.08
PABPC1-220ENST00000522658 PCDHB9Q9Y5E1 797 aa8.32□□□□□ -1.08
PABPC1-220ENST00000522658 ADAMTS7Q9UKP4 1686 aa8.32□□□□□ -1.08
PABPC1-220ENST00000522658 HEG1Q9ULI3 1381 aa8.32□□□□□ -1.08
PABPC1-220ENST00000522658 LTBP3Q9NS15 1303 aa8.31□□□□□ -1.08
PABPC1-220ENST00000522658 A0A1W2PRU2 124 aa8.31□□□□□ -1.08
PABPC1-220ENST00000522658 GNAT3A8MTJ3 354 aa8.31□□□□□ -1.08
PABPC1-220ENST00000522658 IL6STP40189 918 aaPredicted RBP8.31□□□□□ -1.08
PABPC1-220ENST00000522658 CTCFP49711 727 aaPredicted RBP8.31□□□□□ -1.08
PABPC1-220ENST00000522658 EIF5P55010 431 aaKnown RBP8.31□□□□□ -1.08
PABPC1-220ENST00000522658 CC2D1BQ5T0F9 858 aaKnown RBP8.31□□□□□ -1.08
PABPC1-220ENST00000522658 STYK1Q6J9G0 422 aa8.31□□□□□ -1.08
PABPC1-220ENST00000522658 PRR5LQ6MZQ0 368 aa8.31□□□□□ -1.08
PABPC1-220ENST00000522658 ZNF790Q6PG37 636 aa8.31□□□□□ -1.08
PABPC1-220ENST00000522658 GMCL1Q96IK5 515 aa8.31□□□□□ -1.08
PABPC1-220ENST00000522658 CFAP53Q96M91 514 aa8.31□□□□□ -1.08
PABPC1-220ENST00000522658 CNTNAP1P78357 1384 aa8.31□□□□□ -1.08
PABPC1-220ENST00000522658 VIRMAQ69YN4 1812 aaKnown RBP8.31□□□□□ -1.08
PABPC1-220ENST00000522658 UBR2Q8IWV8 1755 aa8.3□□□□□ -1.08
PABPC1-220ENST00000522658 CCDC88AQ3V6T2 1871 aa8.3□□□□□ -1.08
PABPC1-220ENST00000522658 TMEM88BA6NKF7 163 aa8.3□□□□□ -1.08
PABPC1-220ENST00000522658 BTBD11A6QL63 1104 aa8.3□□□□□ -1.08
PABPC1-220ENST00000522658 DDNO94850 711 aaPredicted RBP8.3□□□□□ -1.08
PABPC1-220ENST00000522658 NEFMP07197 916 aa8.3□□□□□ -1.08
PABPC1-220ENST00000522658 LMOD1P29536 600 aaPredicted RBP8.3□□□□□ -1.08
PABPC1-220ENST00000522658 CC2D2BQ6DHV5 1058 aa8.3□□□□□ -1.08
PABPC1-220ENST00000522658 TRIM22Q8IYM9 498 aa8.3□□□□□ -1.08
PABPC1-220ENST00000522658 CCER1Q8TC90 406 aaPredicted RBP8.3□□□□□ -1.08
PABPC1-220ENST00000522658 ZNF496Q96IT1 587 aaPredicted RBP8.3□□□□□ -1.08
PABPC1-220ENST00000522658 TMX4Q9H1E5 349 aaPredicted RBP8.3□□□□□ -1.08
PABPC1-220ENST00000522658 HACL1Q9UJ83 578 aa8.3□□□□□ -1.08
PABPC1-220ENST00000522658 CACNA1SQ13698 1873 aa8.3□□□□□ -1.08
PABPC1-220ENST00000522658 COL11A2P13942 1736 aaPredicted RBP8.29□□□□□ -1.08
PABPC1-220ENST00000522658 CELA2BP08218 269 aaPredicted RBP8.29□□□□□ -1.08
PABPC1-220ENST00000522658 NPR1P16066 1061 aa8.29□□□□□ -1.08
PABPC1-220ENST00000522658 DBN1Q16643 649 aa8.29□□□□□ -1.08
PABPC1-220ENST00000522658 PNMA8AQ86V59 439 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms