RNA–Protein interactions for RNA: ENST00000522539.1

BRF2-204, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF2, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2-204ENST00000522539 CHMP3Q9Y3E7 222 aa15.62■□□□□ 0.09
BRF2-204ENST00000522539 GTF2A2P52657 109 aa15.61■□□□□ 0.09
BRF2-204ENST00000522539 VGLL4Q14135 290 aa15.61■□□□□ 0.09
BRF2-204ENST00000522539 CNKSR2Q8WXI2 1034 aa15.61■□□□□ 0.09
BRF2-204ENST00000522539 TDRD3Q9H7E2 651 aaKnown RBP15.61■□□□□ 0.09
BRF2-204ENST00000522539 CNNM1Q9NRU3 951 aa15.61■□□□□ 0.09
BRF2-204ENST00000522539 HIBADHP31937 336 aaKnown RBP15.6■□□□□ 0.09
BRF2-204ENST00000522539 CRKP46108 304 aa15.6■□□□□ 0.09
BRF2-204ENST00000522539 GYG1P46976 350 aa15.6■□□□□ 0.09
BRF2-204ENST00000522539 MAP3K9P80192 1104 aa15.6■□□□□ 0.09
BRF2-204ENST00000522539 HDLBPQ00341 1268 aaKnown RBP15.6■□□□□ 0.09
BRF2-204ENST00000522539 WDR63Q8IWG1 891 aa15.6■□□□□ 0.09
BRF2-204ENST00000522539 FAM43AQ8N2R8 423 aa15.6■□□□□ 0.09
BRF2-204ENST00000522539 TMEM39BQ9GZU3 492 aa15.6■□□□□ 0.09
BRF2-204ENST00000522539 ZFYVE28Q9HCC9 887 aa15.6■□□□□ 0.09
BRF2-204ENST00000522539 PTCH2Q9Y6C5 1203 aa15.6■□□□□ 0.09
BRF2-204ENST00000522539 CCL15-CCL14A0A0B4J2E2 113 aa15.59■□□□□ 0.09
BRF2-204ENST00000522539 PLIN1O60240 522 aa15.59■□□□□ 0.09
BRF2-204ENST00000522539 FXR1P51114 621 aaKnown RBP eCLIP15.59■□□□□ 0.09
BRF2-204ENST00000522539 EXOSC9Q06265 439 aaKnown RBP15.59■□□□□ 0.09
BRF2-204ENST00000522539 ARHGEF6Q15052 776 aa15.59■□□□□ 0.09
BRF2-204ENST00000522539 TAF1CQ15572 869 aaPredicted RBP15.59■□□□□ 0.09
BRF2-204ENST00000522539 CCL15Q16663 113 aa15.59■□□□□ 0.09
BRF2-204ENST00000522539 FBXO33Q7Z6M2 555 aa15.59■□□□□ 0.09
BRF2-204ENST00000522539 KAZALD1Q96I82 304 aa15.59■□□□□ 0.09
BRF2-204ENST00000522539 TMEM106CQ9BVX2 250 aa15.59■□□□□ 0.09
BRF2-204ENST00000522539 ZCCHC17Q9NP64 241 aaKnown RBP15.59■□□□□ 0.09
BRF2-204ENST00000522539 RIPOR2Q9Y4F9 1068 aa15.59■□□□□ 0.09
BRF2-204ENST00000522539 SPDYE5A6NIY4 337 aa15.58■□□□□ 0.08
BRF2-204ENST00000522539 TCP10L2B9ZVM9 353 aa15.58■□□□□ 0.08
BRF2-204ENST00000522539 ALDH1L1O75891 902 aa15.58■□□□□ 0.08
BRF2-204ENST00000522539 GRIK5Q16478 980 aa15.58■□□□□ 0.08
BRF2-204ENST00000522539 TAF7LQ5H9L4 462 aa15.58■□□□□ 0.08
BRF2-204ENST00000522539 NBPF11Q86T75 865 aa15.58■□□□□ 0.08
BRF2-204ENST00000522539 MRIQ9BWK5 157 aa15.58■□□□□ 0.08
BRF2-204ENST00000522539 TLR2O60603 784 aa15.57■□□□□ 0.08
BRF2-204ENST00000522539 TNNI2P48788 182 aa15.57■□□□□ 0.08
BRF2-204ENST00000522539 SLC9C1Q4G0N8 1177 aa15.57■□□□□ 0.08
BRF2-204ENST00000522539 PUS3Q9BZE2 481 aaKnown RBP15.57■□□□□ 0.08
BRF2-204ENST00000522539 CSADQ9Y600 493 aa15.57■□□□□ 0.08
BRF2-204ENST00000522539 SNCAIPQ9Y6H5 919 aa15.57■□□□□ 0.08
BRF2-204ENST00000522539 UTYO14607 1347 aa15.57■□□□□ 0.08
BRF2-204ENST00000522539 FKBP1CQ5VVH2 108 aa15.56■□□□□ 0.08
BRF2-204ENST00000522539 ERO1BQ86YB8 467 aa15.56■□□□□ 0.08
BRF2-204ENST00000522539 OTUD5Q96G74 571 aa15.56■□□□□ 0.08
BRF2-204ENST00000522539 SPINK5Q9NQ38 1064 aaPredicted RBP15.56■□□□□ 0.08
BRF2-204ENST00000522539 C9orf78Q9NZ63 289 aaPredicted RBP15.56■□□□□ 0.08
BRF2-204ENST00000522539 MROH5Q6ZUA9 1318 aa15.56■□□□□ 0.08
BRF2-204ENST00000522539 RPAP1Q9BWH6 1393 aaPredicted RBP15.55■□□□□ 0.08
BRF2-204ENST00000522539 GNRH1P01148 92 aa15.55■□□□□ 0.08
BRF2-204ENST00000522539 CETPP11597 493 aa15.55■□□□□ 0.08
BRF2-204ENST00000522539 LACTBP83111 547 aaPredicted RBP15.55■□□□□ 0.08
BRF2-204ENST00000522539 RABL6Q3YEC7 729 aaPredicted RBP15.55■□□□□ 0.08
BRF2-204ENST00000522539 FAM83AQ86UY5 434 aa15.55■□□□□ 0.08
BRF2-204ENST00000522539 VGLL2Q8N8G2 317 aa15.55■□□□□ 0.08
BRF2-204ENST00000522539 TBC1D22AQ8WUA7 517 aa15.55■□□□□ 0.08
BRF2-204ENST00000522539 SUCLG2Q96I99 432 aa15.55■□□□□ 0.08
BRF2-204ENST00000522539 ZDHHC15Q96MV8 337 aa15.55■□□□□ 0.08
BRF2-204ENST00000522539 BTBD19C9JJ37 291 aa15.54■□□□□ 0.08
BRF2-204ENST00000522539 IRF6O14896 467 aa15.54■□□□□ 0.08
BRF2-204ENST00000522539 PPIL2Q13356 520 aa15.54■□□□□ 0.08
BRF2-204ENST00000522539 APOBEC3HQ6NTF7 200 aaKnown RBP15.54■□□□□ 0.08
BRF2-204ENST00000522539 TEKT1Q969V4 418 aa15.54■□□□□ 0.08
BRF2-204ENST00000522539 ARHGAP39Q9C0H5 1083 aa15.54■□□□□ 0.08
BRF2-204ENST00000522539 SRCIN1Q9C0H9 1055 aa15.54■□□□□ 0.08
BRF2-204ENST00000522539 COLQQ9Y215 455 aaPredicted RBP15.54■□□□□ 0.08
BRF2-204ENST00000522539 SZT2Q5T011 3432 aa15.53■□□□□ 0.08
BRF2-204ENST00000522539 ZSWIM8A7E2V4 1837 aa15.53■□□□□ 0.08
BRF2-204ENST00000522539 NBPF7P0C2Y1 421 aaPredicted RBP15.53■□□□□ 0.08
BRF2-204ENST00000522539 PRMT2P55345 433 aa15.53■□□□□ 0.08
BRF2-204ENST00000522539 SNAPC2Q13487 334 aa15.53■□□□□ 0.08
BRF2-204ENST00000522539 DIEXFQ68CQ4 756 aaKnown RBP15.53■□□□□ 0.08
BRF2-204ENST00000522539 SUGT1Q9Y2Z0 365 aa15.53■□□□□ 0.08
BRF2-204ENST00000522539 CEP290O15078 2479 aa15.52■□□□□ 0.08
BRF2-204ENST00000522539 KIF16BQ96L93 1317 aa15.52■□□□□ 0.08
BRF2-204ENST00000522539 WDHD1O75717 1129 aaPredicted RBP15.52■□□□□ 0.08
BRF2-204ENST00000522539 CACNB3P54284 484 aa15.52■□□□□ 0.08
BRF2-204ENST00000522539 SLC4A8Q2Y0W8 1093 aa15.52■□□□□ 0.08
BRF2-204ENST00000522539 HHIPL2Q6UWX4 724 aa15.52■□□□□ 0.08
BRF2-204ENST00000522539 C17orf99Q6UX52 265 aa15.52■□□□□ 0.08
BRF2-204ENST00000522539 ZKSCAN4Q969J2 545 aaPredicted RBP15.52■□□□□ 0.08
BRF2-204ENST00000522539 HOOK2Q96ED9 719 aa15.52■□□□□ 0.08
BRF2-204ENST00000522539 WRNIP1Q96S55 665 aa15.52■□□□□ 0.08
BRF2-204ENST00000522539 IQSEC3Q9UPP2 1182 aaPredicted RBP15.52■□□□□ 0.08
BRF2-204ENST00000522539 ADGRA2Q96PE1 1338 aa15.51■□□□□ 0.07
BRF2-204ENST00000522539 PDE8BO95263 885 aa15.51■□□□□ 0.07
BRF2-204ENST00000522539 CTGFP29279 349 aa15.51■□□□□ 0.07
BRF2-204ENST00000522539 PPATQ06203 517 aa15.51■□□□□ 0.07
BRF2-204ENST00000522539 KIF22Q14807 665 aa15.51■□□□□ 0.07
BRF2-204ENST00000522539 LRRC24Q50LG9 513 aa15.51■□□□□ 0.07
BRF2-204ENST00000522539 VPS37DQ86XT2 251 aa15.51■□□□□ 0.07
BRF2-204ENST00000522539 ANKRD44Q8N8A2 993 aa15.51■□□□□ 0.07
BRF2-204ENST00000522539 SH3TC2Q8TF17 1288 aa15.51■□□□□ 0.07
BRF2-204ENST00000522539 BICC1Q9H694 974 aaKnown RBP15.51■□□□□ 0.07
BRF2-204ENST00000522539 MAST3O60307 1309 aa15.5■□□□□ 0.07
BRF2-204ENST00000522539 FGFR2P21802 821 aa15.5■□□□□ 0.07
BRF2-204ENST00000522539 CHAF1AQ13111 956 aaPredicted RBP15.5■□□□□ 0.07
BRF2-204ENST00000522539 CAVIN4Q5BKX8 364 aa15.5■□□□□ 0.07
BRF2-204ENST00000522539 SLC4A10Q6U841 1118 aa15.5■□□□□ 0.07
BRF2-204ENST00000522539 SHISA4Q96DD7 197 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms