RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 MICALL1Q8N3F8 863 aa7.39□□□□□ -1.23
CTNNA1-233ENST00000522052 FBXO27Q8NI29 283 aa7.39□□□□□ -1.23
CTNNA1-233ENST00000522052 HNRNPLLQ8WVV9 542 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-233ENST00000522052 TNFRSF25Q93038 417 aa7.39□□□□□ -1.23
CTNNA1-233ENST00000522052 PLD4Q96BZ4 506 aa7.39□□□□□ -1.23
CTNNA1-233ENST00000522052 SHDQ96IW2 340 aa7.39□□□□□ -1.23
CTNNA1-233ENST00000522052 ADAM19Q9H013 955 aa7.39□□□□□ -1.23
CTNNA1-233ENST00000522052 PPT2Q9UMR5 302 aa7.39□□□□□ -1.23
CTNNA1-233ENST00000522052 GPR25O00155 361 aa7.38□□□□□ -1.23
CTNNA1-233ENST00000522052 C2CD2LO14523 706 aa7.38□□□□□ -1.23
CTNNA1-233ENST00000522052 CILPO75339 1184 aa7.38□□□□□ -1.23
CTNNA1-233ENST00000522052 CPB1P15086 417 aa7.38□□□□□ -1.23
CTNNA1-233ENST00000522052 PTPRAP18433 802 aa7.38□□□□□ -1.23
CTNNA1-233ENST00000522052 ZNF165P49910 485 aa7.38□□□□□ -1.23
CTNNA1-233ENST00000522052 CWF19L2Q2TBE0 894 aaKnown RBP7.38□□□□□ -1.23
CTNNA1-233ENST00000522052 TNNI3KQ59H18 835 aa7.38□□□□□ -1.23
CTNNA1-233ENST00000522052 DIEXFQ68CQ4 756 aaKnown RBP7.38□□□□□ -1.23
CTNNA1-233ENST00000522052 CCDC81Q6ZN84 652 aa7.38□□□□□ -1.23
CTNNA1-233ENST00000522052 SULF2Q8IWU5 870 aa7.38□□□□□ -1.23
CTNNA1-233ENST00000522052 JARID2Q92833 1246 aaPredicted RBP7.38□□□□□ -1.23
CTNNA1-233ENST00000522052 SLC6A14Q9UN76 642 aa7.38□□□□□ -1.23
CTNNA1-233ENST00000522052 R3HCC1Q9Y3T6 440 aaKnown RBP7.38□□□□□ -1.23
CTNNA1-233ENST00000522052 CDC14CA4D256 554 aa7.37□□□□□ -1.23
CTNNA1-233ENST00000522052 BMP4P12644 408 aa7.37□□□□□ -1.23
CTNNA1-233ENST00000522052 ARNTP27540 789 aa7.37□□□□□ -1.23
CTNNA1-233ENST00000522052 EIF6P56537 245 aaKnown RBP7.37□□□□□ -1.23
CTNNA1-233ENST00000522052 PCBP4P57723 403 aaKnown RBP7.37□□□□□ -1.23
CTNNA1-233ENST00000522052 SEPT6Q14141 434 aa7.37□□□□□ -1.23
CTNNA1-233ENST00000522052 PERM1Q5SV97 790 aa7.37□□□□□ -1.23
CTNNA1-233ENST00000522052 LLGL2Q6P1M3 1020 aa7.37□□□□□ -1.23
CTNNA1-233ENST00000522052 ADAMTSL4Q6UY14 1074 aa7.37□□□□□ -1.23
CTNNA1-233ENST00000522052 LRP10Q7Z4F1 713 aa7.37□□□□□ -1.23
CTNNA1-233ENST00000522052 REXO1Q8N1G1 1221 aaKnown RBP7.37□□□□□ -1.23
CTNNA1-233ENST00000522052 STK35Q8TDR2 534 aa7.37□□□□□ -1.23
CTNNA1-233ENST00000522052 SRPK1Q96SB4 655 aaKnown RBP7.37□□□□□ -1.23
CTNNA1-233ENST00000522052 EMILIN2Q9BXX0 1053 aa7.37□□□□□ -1.23
CTNNA1-233ENST00000522052 SBNO2Q9Y2G9 1366 aa7.36□□□□□ -1.23
CTNNA1-233ENST00000522052 ADARB2-AS1A8MUL3 147 aa7.36□□□□□ -1.23
CTNNA1-233ENST00000522052 SMAD7O15105 426 aaKnown RBP7.36□□□□□ -1.23
CTNNA1-233ENST00000522052 PPFIA3O75145 1194 aa7.36□□□□□ -1.23
CTNNA1-233ENST00000522052 ESRRAP11474 423 aaPredicted RBP7.36□□□□□ -1.23
CTNNA1-233ENST00000522052 MCM4P33991 863 aa7.36□□□□□ -1.23
CTNNA1-233ENST00000522052 GIPRP48546 466 aa7.36□□□□□ -1.23
CTNNA1-233ENST00000522052 SCARA3Q6AZY7 606 aa7.36□□□□□ -1.23
CTNNA1-233ENST00000522052 ELMSAN1Q6PJG2 1045 aa7.36□□□□□ -1.23
CTNNA1-233ENST00000522052 SV2AQ7L0J3 742 aa7.36□□□□□ -1.23
CTNNA1-233ENST00000522052 VWA5B2Q8N398 1253 aa7.36□□□□□ -1.23
CTNNA1-233ENST00000522052 GAL3ST3Q96A11 431 aa7.36□□□□□ -1.23
CTNNA1-233ENST00000522052 SMG9Q9H0W8 520 aaKnown RBP7.36□□□□□ -1.23
CTNNA1-233ENST00000522052 FRRS1LQ9P0K9 344 aa7.36□□□□□ -1.23
CTNNA1-233ENST00000522052 NAGPAQ9UK23 515 aa7.36□□□□□ -1.23
CTNNA1-233ENST00000522052 MRPL42Q9Y6G3 142 aaKnown RBP7.36□□□□□ -1.23
CTNNA1-233ENST00000522052 FAM177BA6PVY3 158 aa7.35□□□□□ -1.23
CTNNA1-233ENST00000522052 HSD3B2P26439 372 aa7.35□□□□□ -1.23
CTNNA1-233ENST00000522052 ADH7P40394 386 aa7.35□□□□□ -1.23
CTNNA1-233ENST00000522052 TCEAL1Q15170 157 aa7.35□□□□□ -1.23
CTNNA1-233ENST00000522052 REC114Q7Z4M0 266 aa7.35□□□□□ -1.23
CTNNA1-233ENST00000522052 ANKRD13AQ8IZ07 590 aa7.35□□□□□ -1.23
CTNNA1-233ENST00000522052 OR6P1Q8NGX9 317 aa7.35□□□□□ -1.23
CTNNA1-233ENST00000522052 GRIN3AQ8TCU5 1115 aa7.35□□□□□ -1.23
CTNNA1-233ENST00000522052 DDX54Q8TDD1 881 aaKnown RBP7.35□□□□□ -1.23
CTNNA1-233ENST00000522052 NANOS1Q8WY41 292 aaKnown RBP7.35□□□□□ -1.23
CTNNA1-233ENST00000522052 DEPDC7Q96QD5 511 aa7.35□□□□□ -1.23
CTNNA1-233ENST00000522052 FERD3LQ96RJ6 166 aa7.35□□□□□ -1.23
CTNNA1-233ENST00000522052 CRBNQ96SW2 442 aa7.35□□□□□ -1.23
CTNNA1-233ENST00000522052 LPIN3Q9BQK8 851 aa7.35□□□□□ -1.23
CTNNA1-233ENST00000522052 LACRTQ9GZZ8 138 aa7.35□□□□□ -1.23
CTNNA1-233ENST00000522052 CBX8Q9HC52 389 aa7.35□□□□□ -1.23
CTNNA1-233ENST00000522052 BRMS1Q9HCU9 246 aa7.35□□□□□ -1.23
CTNNA1-233ENST00000522052 SNTG2Q9NY99 539 aa7.35□□□□□ -1.23
CTNNA1-233ENST00000522052 GMPR2Q9P2T1 348 aaKnown RBP7.35□□□□□ -1.23
CTNNA1-233ENST00000522052 ZNRF3Q9ULT6 936 aa7.35□□□□□ -1.23
CTNNA1-233ENST00000522052 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.35□□□□□ -1.23
CTNNA1-233ENST00000522052 TRIM33Q9UPN9 1127 aa7.35□□□□□ -1.23
CTNNA1-233ENST00000522052 BPNT1O95861 308 aa7.34□□□□□ -1.23
CTNNA1-233ENST00000522052 ARAFP10398 606 aa7.34□□□□□ -1.23
CTNNA1-233ENST00000522052 IMPDH2P12268 514 aa7.34□□□□□ -1.23
CTNNA1-233ENST00000522052 ZNF252P-AS1Q0IIN9 211 aa7.34□□□□□ -1.23
CTNNA1-233ENST00000522052 IKBKEQ14164 716 aa7.34□□□□□ -1.23
CTNNA1-233ENST00000522052 RASA3Q14644 834 aa7.34□□□□□ -1.23
CTNNA1-233ENST00000522052 FAM169BQ8N8A8 192 aa7.34□□□□□ -1.23
CTNNA1-233ENST00000522052 TTC9Q92623 222 aa7.34□□□□□ -1.23
CTNNA1-233ENST00000522052 KLF15Q9UIH9 416 aa7.34□□□□□ -1.23
CTNNA1-233ENST00000522052 SNRPBP14678 240 aaKnown RBP7.33□□□□□ -1.24
CTNNA1-233ENST00000522052 MX2P20592 715 aa7.33□□□□□ -1.24
CTNNA1-233ENST00000522052 ADH6P28332 368 aa7.33□□□□□ -1.24
CTNNA1-233ENST00000522052 CDC27P30260 824 aa7.33□□□□□ -1.24
CTNNA1-233ENST00000522052 RPL6Q02878 288 aaKnown RBP7.33□□□□□ -1.24
CTNNA1-233ENST00000522052 FBXW10Q5XX13 1052 aa7.33□□□□□ -1.24
CTNNA1-233ENST00000522052 GK5Q6ZS86 529 aa7.33□□□□□ -1.24
CTNNA1-233ENST00000522052 PDZD3Q86UT5 571 aa7.33□□□□□ -1.24
CTNNA1-233ENST00000522052 CACTIN-AS1Q8N1I8 211 aa7.33□□□□□ -1.24
CTNNA1-233ENST00000522052 RBBP8NLQ8NC74 664 aaPredicted RBP7.33□□□□□ -1.24
CTNNA1-233ENST00000522052 MDFIQ99750 246 aa7.33□□□□□ -1.24
CTNNA1-233ENST00000522052 CCDC113Q9H0I3 377 aa7.33□□□□□ -1.24
CTNNA1-233ENST00000522052 SH2B1Q9NRF2 756 aaPredicted RBP7.33□□□□□ -1.24
CTNNA1-233ENST00000522052 FAM221BA6H8Z2 402 aa7.32□□□□□ -1.24
CTNNA1-233ENST00000522052 ENPP3O14638 875 aa7.32□□□□□ -1.24
CTNNA1-233ENST00000522052 TRIM37O94972 964 aa7.32□□□□□ -1.24
CTNNA1-233ENST00000522052 CLSTN1O94985 981 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms