RNA–Protein interactions for RNA: ENST00000521179.5

TVP23C-206, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-206ENST00000521179 COL19A1Q14993 1142 aa9.45□□□□□ -0.9
TVP23C-206ENST00000521179 NXPE3Q969Y0 559 aa9.45□□□□□ -0.9
TVP23C-206ENST00000521179 PREX2Q70Z35 1606 aa9.45□□□□□ -0.9
TVP23C-206ENST00000521179 RIMS1Q86UR5 1692 aaKnown RBP9.45□□□□□ -0.9
TVP23C-206ENST00000521179 CDC42BPAQ5VT25 1732 aa9.45□□□□□ -0.9
TVP23C-206ENST00000521179 STRCQ7RTU9 1775 aa9.45□□□□□ -0.9
TVP23C-206ENST00000521179 A0A1W2PP55 124 aa9.44□□□□□ -0.9
TVP23C-206ENST00000521179 SPDYE3A6NKU9 549 aa9.44□□□□□ -0.9
TVP23C-206ENST00000521179 PDE2AO00408 941 aaPredicted RBP9.44□□□□□ -0.9
TVP23C-206ENST00000521179 TRPA1O75762 1119 aa9.44□□□□□ -0.9
TVP23C-206ENST00000521179 COL8A1P27658 744 aa9.44□□□□□ -0.9
TVP23C-206ENST00000521179 TRAPPC3LQ5T215 181 aa9.44□□□□□ -0.9
TVP23C-206ENST00000521179 KIAA0319Q5VV43 1072 aa9.44□□□□□ -0.9
TVP23C-206ENST00000521179 GDF6Q6KF10 455 aaPredicted RBP9.44□□□□□ -0.9
TVP23C-206ENST00000521179 ADAMTSL4Q6UY14 1074 aa9.44□□□□□ -0.9
TVP23C-206ENST00000521179 HHIPQ96QV1 700 aa9.44□□□□□ -0.9
TVP23C-206ENST00000521179 ADAM19Q9H013 955 aa9.44□□□□□ -0.9
TVP23C-206ENST00000521179 POGZQ7Z3K3 1410 aa9.44□□□□□ -0.9
TVP23C-206ENST00000521179 EHBP1L1Q8N3D4 1523 aa9.44□□□□□ -0.9
TVP23C-206ENST00000521179 LTBP4Q8N2S1 1624 aa9.44□□□□□ -0.9
TVP23C-206ENST00000521179 TIAM1Q13009 1591 aa9.43□□□□□ -0.9
TVP23C-206ENST00000521179 ALYREFQ86V81 257 aaKnown RBP9.43□□□□□ -0.9
TVP23C-206ENST00000521179 WFDC8Q8IUA0 241 aa9.43□□□□□ -0.9
TVP23C-206ENST00000521179 DMRTC2Q8IXT2 367 aaPredicted RBP9.43□□□□□ -0.9
TVP23C-206ENST00000521179 IL22RA1Q8N6P7 574 aa9.43□□□□□ -0.9
TVP23C-206ENST00000521179 ZNF518AQ6AHZ1 1483 aa9.42□□□□□ -0.9
TVP23C-206ENST00000521179 MAGI2Q86UL8 1455 aa9.42□□□□□ -0.9
TVP23C-206ENST00000521179 YEATS2Q9ULM3 1422 aa9.42□□□□□ -0.9
TVP23C-206ENST00000521179 ZNF644Q9H582 1327 aaPredicted RBP9.42□□□□□ -0.9
TVP23C-206ENST00000521179 PNMA6FA0A0J9YX94 578 aa9.42□□□□□ -0.9
TVP23C-206ENST00000521179 P4HBP07237 508 aaKnown RBP9.42□□□□□ -0.9
TVP23C-206ENST00000521179 PTPRAP18433 802 aa9.42□□□□□ -0.9
TVP23C-206ENST00000521179 ERCC3P19447 782 aa9.42□□□□□ -0.9
TVP23C-206ENST00000521179 BHLHE41Q9C0J9 482 aaPredicted RBP9.42□□□□□ -0.9
TVP23C-206ENST00000521179 NPHS2Q9NP85 383 aa9.42□□□□□ -0.9
TVP23C-206ENST00000521179 ZFYVE16Q7Z3T8 1539 aa9.41□□□□□ -0.9
TVP23C-206ENST00000521179 ARHGEF12Q9NZN5 1544 aa9.41□□□□□ -0.9
TVP23C-206ENST00000521179 NCOA2Q15596 1464 aa9.41□□□□□ -0.9
TVP23C-206ENST00000521179 LRRC9Q6ZRR7 1453 aa9.41□□□□□ -0.9
TVP23C-206ENST00000521179 TRAPPC8Q9Y2L5 1435 aa9.41□□□□□ -0.9
TVP23C-206ENST00000521179 A0A0A0MRY4 1105 aa9.41□□□□□ -0.9
TVP23C-206ENST00000521179 CDC27P30260 824 aa9.41□□□□□ -0.9
TVP23C-206ENST00000521179 MAPK8P45983 427 aa9.41□□□□□ -0.9
TVP23C-206ENST00000521179 RASSF7Q02833 373 aa9.41□□□□□ -0.9
TVP23C-206ENST00000521179 MLECQ14165 292 aa9.41□□□□□ -0.9
TVP23C-206ENST00000521179 TMCO4Q5TGY1 634 aa9.41□□□□□ -0.9
TVP23C-206ENST00000521179 NPAS4Q8IUM7 802 aa9.41□□□□□ -0.9
TVP23C-206ENST00000521179 DTWD1Q8N5C7 304 aa9.41□□□□□ -0.9
TVP23C-206ENST00000521179 EPS8L3Q8TE67 593 aaKnown RBP9.41□□□□□ -0.9
TVP23C-206ENST00000521179 LACRTQ9GZZ8 138 aa9.41□□□□□ -0.9
TVP23C-206ENST00000521179 MUC3BQ9H195 1237 aa9.41□□□□□ -0.9
TVP23C-206ENST00000521179 SUPT6HQ7KZ85 1726 aaKnown RBP9.41□□□□□ -0.9
TVP23C-206ENST00000521179 ZMYM4Q5VZL5 1548 aa9.41□□□□□ -0.9
TVP23C-206ENST00000521179 SPAG9O60271 1321 aaKnown RBP9.4□□□□□ -0.9
TVP23C-206ENST00000521179 TRIM28Q13263 835 aaKnown RBP9.4□□□□□ -0.9
TVP23C-206ENST00000521179 CCNJLQ8IV13 435 aa9.4□□□□□ -0.9
TVP23C-206ENST00000521179 FBF1Q8TES7 1133 aa9.4□□□□□ -0.9
TVP23C-206ENST00000521179 TCF12Q99081 682 aa9.4□□□□□ -0.9
TVP23C-206ENST00000521179 PPME1Q9Y570 386 aa9.4□□□□□ -0.9
TVP23C-206ENST00000521179 SAMD9LQ8IVG5 1584 aa9.4□□□□□ -0.9
TVP23C-206ENST00000521179 ABCC1P33527 1531 aa9.4□□□□□ -0.91
TVP23C-206ENST00000521179 MAP3K1Q13233 1512 aa9.4□□□□□ -0.91
TVP23C-206ENST00000521179 ATP10AO60312 1499 aa9.4□□□□□ -0.91
TVP23C-206ENST00000521179 CLSPNQ9HAW4 1339 aa9.39□□□□□ -0.91
TVP23C-206ENST00000521179 PRRT3Q5FWE3 981 aa9.39□□□□□ -0.91
TVP23C-206ENST00000521179 LIN7BQ9HAP6 207 aa9.39□□□□□ -0.91
TVP23C-206ENST00000521179 SH2B1Q9NRF2 756 aaPredicted RBP9.39□□□□□ -0.91
TVP23C-206ENST00000521179 ARHGEF40Q8TER5 1519 aa9.39□□□□□ -0.91
TVP23C-206ENST00000521179 PLEKHH2Q8IVE3 1493 aa9.39□□□□□ -0.91
TVP23C-206ENST00000521179 KIAA1107Q9UPP5 1409 aa9.39□□□□□ -0.91
TVP23C-206ENST00000521179 ITSN2Q9NZM3 1697 aa9.39□□□□□ -0.91
TVP23C-206ENST00000521179 SYCP2Q9BX26 1530 aa9.38□□□□□ -0.91
TVP23C-206ENST00000521179 SPATA31C1P0DKV0 1188 aa9.38□□□□□ -0.91
TVP23C-206ENST00000521179 RAC1P63000 192 aa9.38□□□□□ -0.91
TVP23C-206ENST00000521179 ALG1LQ6GMV1 187 aa9.38□□□□□ -0.91
TVP23C-206ENST00000521179 BSNDQ8WZ55 320 aa9.38□□□□□ -0.91
TVP23C-206ENST00000521179 DCAF5Q96JK2 942 aa9.38□□□□□ -0.91
TVP23C-206ENST00000521179 EHD4Q9H223 541 aa9.38□□□□□ -0.91
TVP23C-206ENST00000521179 WWC3Q9ULE0 1092 aa9.38□□□□□ -0.91
TVP23C-206ENST00000521179 SOX13Q9UN79 622 aa9.38□□□□□ -0.91
TVP23C-206ENST00000521179 MLH3Q9UHC1 1453 aa9.37□□□□□ -0.91
TVP23C-206ENST00000521179 ATP2B2Q01814 1243 aa9.37□□□□□ -0.91
TVP23C-206ENST00000521179 FBXO11Q86XK2 927 aa9.37□□□□□ -0.91
TVP23C-206ENST00000521179 MAP4K3Q8IVH8 894 aa9.37□□□□□ -0.91
TVP23C-206ENST00000521179 FMR1NBQ8N0W7 255 aaPredicted RBP9.37□□□□□ -0.91
TVP23C-206ENST00000521179 SRA1Q9HD15 236 aaKnown RBP9.37□□□□□ -0.91
TVP23C-206ENST00000521179 NLRP2Q9NX02 1062 aa9.37□□□□□ -0.91
TVP23C-206ENST00000521179 C9orf84Q5VXU9 1444 aa9.37□□□□□ -0.91
TVP23C-206ENST00000521179 KDM5CP41229 1560 aa9.37□□□□□ -0.91
TVP23C-206ENST00000521179 FAM229AH3BQW9 127 aa9.36□□□□□ -0.91
TVP23C-206ENST00000521179 GADD45BO75293 160 aaPredicted RBP9.36□□□□□ -0.91
TVP23C-206ENST00000521179 DEAF1O75398 565 aaPredicted RBP9.36□□□□□ -0.91
TVP23C-206ENST00000521179 GDF11O95390 407 aa9.36□□□□□ -0.91
TVP23C-206ENST00000521179 LDHBP07195 334 aaKnown RBP9.36□□□□□ -0.91
TVP23C-206ENST00000521179 EPHA1P21709 976 aa9.36□□□□□ -0.91
TVP23C-206ENST00000521179 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.36□□□□□ -0.91
TVP23C-206ENST00000521179 PRPF40BQ6NWY9 871 aaKnown RBP9.36□□□□□ -0.91
TVP23C-206ENST00000521179 PI16Q6UXB8 463 aa9.36□□□□□ -0.91
TVP23C-206ENST00000521179 TMEM151AQ8N4L1 468 aa9.36□□□□□ -0.91
TVP23C-206ENST00000521179 SETDB2Q96T68 719 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 211.6 ms