RNA–Protein interactions for RNA: ENST00000520119.1

IGHV1-17-201, Transcript of immunoglobulin heavy variable 1-17 (pseudogene), humanhuman

BASIC

Gene IGHV1-17, Length 334 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV1-17-201ENST00000520119 E9PSI1 815 aa13.91□□□□□ -0.18
IGHV1-17-201ENST00000520119 UBE4AQ14139 1066 aa13.91□□□□□ -0.18
IGHV1-17-201ENST00000520119 ARMC9Q7Z3E5 817 aa13.91□□□□□ -0.18
IGHV1-17-201ENST00000520119 SUCLG2Q96I99 432 aa13.91□□□□□ -0.18
IGHV1-17-201ENST00000520119 PTPRCP08575 1304 aa13.9□□□□□ -0.18
IGHV1-17-201ENST00000520119 MYO1BO43795 1136 aa13.9□□□□□ -0.18
IGHV1-17-201ENST00000520119 NBPF7P0C2Y1 421 aaPredicted RBP13.9□□□□□ -0.18
IGHV1-17-201ENST00000520119 MRPL50Q8N5N7 158 aaKnown RBP13.9□□□□□ -0.18
IGHV1-17-201ENST00000520119 KAZALD1Q96I82 304 aa13.9□□□□□ -0.18
IGHV1-17-201ENST00000520119 DEFB129Q9H1M3 183 aa13.9□□□□□ -0.18
IGHV1-17-201ENST00000520119 COL1A1P02452 1464 aaPredicted RBP13.9□□□□□ -0.18
IGHV1-17-201ENST00000520119 CFAP100Q494V2 611 aa13.89□□□□□ -0.19
IGHV1-17-201ENST00000520119 PPP2R3BQ9Y5P8 575 aa13.89□□□□□ -0.19
IGHV1-17-201ENST00000520119 FAM205AQ6ZU69 1335 aa13.89□□□□□ -0.19
IGHV1-17-201ENST00000520119 MROH5Q6ZUA9 1318 aa13.89□□□□□ -0.19
IGHV1-17-201ENST00000520119 F8W031 263 aaPredicted RBP13.88□□□□□ -0.19
IGHV1-17-201ENST00000520119 PPP1R37O75864 691 aa13.88□□□□□ -0.19
IGHV1-17-201ENST00000520119 HIBADHP31937 336 aaKnown RBP13.88□□□□□ -0.19
IGHV1-17-201ENST00000520119 TM4SF4P48230 202 aa13.88□□□□□ -0.19
IGHV1-17-201ENST00000520119 RGS19P49795 217 aa13.88□□□□□ -0.19
IGHV1-17-201ENST00000520119 PTPN12Q05209 780 aaKnown RBP13.88□□□□□ -0.19
IGHV1-17-201ENST00000520119 RABL6Q3YEC7 729 aaPredicted RBP13.88□□□□□ -0.19
IGHV1-17-201ENST00000520119 LDLRAD1Q5T700 205 aa13.88□□□□□ -0.19
IGHV1-17-201ENST00000520119 TDRD7Q8NHU6 1098 aaKnown RBP13.88□□□□□ -0.19
IGHV1-17-201ENST00000520119 PUS3Q9BZE2 481 aaKnown RBP13.88□□□□□ -0.19
IGHV1-17-201ENST00000520119 BICC1Q9H694 974 aaKnown RBP13.88□□□□□ -0.19
IGHV1-17-201ENST00000520119 RIPOR2Q9Y4F9 1068 aa13.88□□□□□ -0.19
IGHV1-17-201ENST00000520119 ECM29Q5VYK3 1845 aa13.87□□□□□ -0.19
IGHV1-17-201ENST00000520119 PPP1R12BO60237 982 aaPredicted RBP13.87□□□□□ -0.19
IGHV1-17-201ENST00000520119 ATN1P54259 1190 aaPredicted RBP13.87□□□□□ -0.19
IGHV1-17-201ENST00000520119 SLFN5Q08AF3 891 aa13.87□□□□□ -0.19
IGHV1-17-201ENST00000520119 SREBF2Q12772 1141 aa13.87□□□□□ -0.19
IGHV1-17-201ENST00000520119 PRKG1Q13976 671 aa13.87□□□□□ -0.19
IGHV1-17-201ENST00000520119 SUPT20HL1Q3ZLR7 823 aa13.87□□□□□ -0.19
IGHV1-17-201ENST00000520119 SSH1Q8WYL5 1049 aa13.87□□□□□ -0.19
IGHV1-17-201ENST00000520119 FAM84BQ96KN1 310 aaPredicted RBP13.87□□□□□ -0.19
IGHV1-17-201ENST00000520119 PRMT6Q96LA8 375 aaPredicted RBP13.87□□□□□ -0.19
IGHV1-17-201ENST00000520119 ANGEL1Q9UNK9 670 aaKnown RBP13.87□□□□□ -0.19
IGHV1-17-201ENST00000520119 JAG2Q9Y219 1238 aa13.87□□□□□ -0.19
IGHV1-17-201ENST00000520119 UNCXA6NJT0 531 aa13.86□□□□□ -0.19
IGHV1-17-201ENST00000520119 GYG1P46976 350 aa13.86□□□□□ -0.19
IGHV1-17-201ENST00000520119 RBM5P52756 815 aaKnown RBP eCLIP13.86□□□□□ -0.19
IGHV1-17-201ENST00000520119 MAP3K11Q16584 847 aa13.86□□□□□ -0.19
IGHV1-17-201ENST00000520119 MFSD14BQ5SR56 506 aa13.86□□□□□ -0.19
IGHV1-17-201ENST00000520119 CTU1Q7Z7A3 348 aaKnown RBP13.86□□□□□ -0.19
IGHV1-17-201ENST00000520119 MS4A4AQ96JQ5 239 aa13.86□□□□□ -0.19
IGHV1-17-201ENST00000520119 SERPINA10Q9UK55 444 aa13.86□□□□□ -0.19
IGHV1-17-201ENST00000520119 PCDHAC2Q9Y5I4 1007 aa13.86□□□□□ -0.19
IGHV1-17-201ENST00000520119 CLRN2A0PK11 232 aa13.85□□□□□ -0.19
IGHV1-17-201ENST00000520119 ATMINO43313 823 aaPredicted RBP13.85□□□□□ -0.19
IGHV1-17-201ENST00000520119 MLLT1Q03111 559 aaPredicted RBP13.85□□□□□ -0.19
IGHV1-17-201ENST00000520119 TNFAIP1Q13829 316 aa13.85□□□□□ -0.19
IGHV1-17-201ENST00000520119 ALDH1L2Q3SY69 923 aa13.85□□□□□ -0.19
IGHV1-17-201ENST00000520119 NOM1Q5C9Z4 860 aaKnown RBP13.85□□□□□ -0.19
IGHV1-17-201ENST00000520119 SPRYD7Q5W111 196 aa13.85□□□□□ -0.19
IGHV1-17-201ENST00000520119 VPS37DQ86XT2 251 aa13.85□□□□□ -0.19
IGHV1-17-201ENST00000520119 ANKRD44Q8N8A2 993 aa13.85□□□□□ -0.19
IGHV1-17-201ENST00000520119 SLC10A4Q96EP9 437 aa13.85□□□□□ -0.19
IGHV1-17-201ENST00000520119 USP44Q9H0E7 712 aa13.85□□□□□ -0.19
IGHV1-17-201ENST00000520119 VEZTQ9HBM0 779 aa13.85□□□□□ -0.19
IGHV1-17-201ENST00000520119 TTF2Q9UNY4 1162 aaKnown RBP13.85□□□□□ -0.19
IGHV1-17-201ENST00000520119 PDE8BO95263 885 aa13.84□□□□□ -0.19
IGHV1-17-201ENST00000520119 INHBEP58166 350 aa13.84□□□□□ -0.19
IGHV1-17-201ENST00000520119 LRRC24Q50LG9 513 aa13.84□□□□□ -0.19
IGHV1-17-201ENST00000520119 CAVIN4Q5BKX8 364 aa13.84□□□□□ -0.19
IGHV1-17-201ENST00000520119 METTL24Q5JXM2 366 aa13.84□□□□□ -0.19
IGHV1-17-201ENST00000520119 ASTLQ6HA08 431 aaPredicted RBP13.84□□□□□ -0.19
IGHV1-17-201ENST00000520119 FBXO33Q7Z6M2 555 aa13.84□□□□□ -0.19
IGHV1-17-201ENST00000520119 TBC1D8O95759 1140 aa13.83□□□□□ -0.2
IGHV1-17-201ENST00000520119 ALDH1A1P00352 501 aa13.83□□□□□ -0.2
IGHV1-17-201ENST00000520119 ZBTB48P10074 688 aaPredicted RBP13.83□□□□□ -0.2
IGHV1-17-201ENST00000520119 RASA3Q14644 834 aa13.83□□□□□ -0.2
IGHV1-17-201ENST00000520119 TBC1D22AQ8WUA7 517 aa13.83□□□□□ -0.2
IGHV1-17-201ENST00000520119 CFHR5Q9BXR6 569 aa13.83□□□□□ -0.2
IGHV1-17-201ENST00000520119 FZD1Q9UP38 647 aa13.83□□□□□ -0.2
IGHV1-17-201ENST00000520119 MANSC4A6NHS7 340 aaPredicted RBP13.82□□□□□ -0.2
IGHV1-17-201ENST00000520119 FRAT2O75474 233 aaPredicted RBP13.82□□□□□ -0.2
IGHV1-17-201ENST00000520119 CT47B1P0C2W7 299 aaPredicted RBP13.82□□□□□ -0.2
IGHV1-17-201ENST00000520119 IREB2P48200 963 aaKnown RBP13.82□□□□□ -0.2
IGHV1-17-201ENST00000520119 PKN2Q16513 984 aaKnown RBP13.82□□□□□ -0.2
IGHV1-17-201ENST00000520119 NBPF12Q5TAG4 269 aaPredicted RBP13.82□□□□□ -0.2
IGHV1-17-201ENST00000520119 DZIP1LQ8IYY4 767 aaKnown RBP13.82□□□□□ -0.2
IGHV1-17-201ENST00000520119 VGLL2Q8N8G2 317 aa13.82□□□□□ -0.2
IGHV1-17-201ENST00000520119 ZNF296Q8WUU4 475 aaPredicted RBP13.82□□□□□ -0.2
IGHV1-17-201ENST00000520119 SMC4Q9NTJ3 1288 aa13.82□□□□□ -0.2
IGHV1-17-201ENST00000520119 ZNF70Q9UC06 446 aaPredicted RBP13.82□□□□□ -0.2
IGHV1-17-201ENST00000520119 SSC5DA1L4H1 1573 aa13.82□□□□□ -0.2
IGHV1-17-201ENST00000520119 AOX1Q06278 1338 aa13.82□□□□□ -0.2
IGHV1-17-201ENST00000520119 PDE4DIPQ5VU43 2346 aa13.81□□□□□ -0.2
IGHV1-17-201ENST00000520119 GPR25O00155 361 aa13.81□□□□□ -0.2
IGHV1-17-201ENST00000520119 CRKP46108 304 aa13.81□□□□□ -0.2
IGHV1-17-201ENST00000520119 HDLBPQ00341 1268 aaKnown RBP13.81□□□□□ -0.2
IGHV1-17-201ENST00000520119 TRMT2AQ8IZ69 625 aaKnown RBP13.81□□□□□ -0.2
IGHV1-17-201ENST00000520119 CDCA7LQ96GN5 454 aa13.81□□□□□ -0.2
IGHV1-17-201ENST00000520119 WNK4Q96J92 1243 aa13.81□□□□□ -0.2
IGHV1-17-201ENST00000520119 CLMNQ96JQ2 1002 aa13.81□□□□□ -0.2
IGHV1-17-201ENST00000520119 TDRD3Q9H7E2 651 aaKnown RBP13.81□□□□□ -0.2
IGHV1-17-201ENST00000520119 KIF16BQ96L93 1317 aa13.81□□□□□ -0.2
IGHV1-17-201ENST00000520119 ARAP2Q8WZ64 1704 aa13.81□□□□□ -0.2
IGHV1-17-201ENST00000520119 USP2O75604 605 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms