RNA–Protein interactions for RNA: ENST00000519824.6

FAM49B-215, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM49B, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-215ENST00000519824 HELLSQ9NRZ9 838 aa14.46□□□□□ -0.1
FAM49B-215ENST00000519824 CCNL1Q9UK58 526 aaPredicted RBP14.46□□□□□ -0.1
FAM49B-215ENST00000519824 SLC3A2P08195 630 aaKnown RBP14.45□□□□□ -0.1
FAM49B-215ENST00000519824 DDIT3P35638 169 aa14.45□□□□□ -0.1
FAM49B-215ENST00000519824 PUM3Q15397 648 aaKnown RBP14.45□□□□□ -0.1
FAM49B-215ENST00000519824 CEP57L1Q8IYX8 460 aa14.45□□□□□ -0.1
FAM49B-215ENST00000519824 SENP2Q9HC62 589 aa14.45□□□□□ -0.1
FAM49B-215ENST00000519824 MCM9Q9NXL9 1143 aa14.45□□□□□ -0.1
FAM49B-215ENST00000519824 CLSTN1O94985 981 aa14.45□□□□□ -0.1
FAM49B-215ENST00000519824 CYP2E1P05181 493 aaPredicted RBP14.45□□□□□ -0.1
FAM49B-215ENST00000519824 ZMYM1Q5SVZ6 1142 aa14.45□□□□□ -0.1
FAM49B-215ENST00000519824 EEF2KMTQ96G04 330 aa14.45□□□□□ -0.1
FAM49B-215ENST00000519824 PCMTD1Q96MG8 357 aaPredicted RBP14.45□□□□□ -0.1
FAM49B-215ENST00000519824 CLIC4Q9Y696 253 aa14.45□□□□□ -0.1
FAM49B-215ENST00000519824 MPHOSPH10O00566 681 aaKnown RBP14.45□□□□□ -0.1
FAM49B-215ENST00000519824 ERCC3P19447 782 aa14.45□□□□□ -0.1
FAM49B-215ENST00000519824 CHRNDQ07001 517 aa14.45□□□□□ -0.1
FAM49B-215ENST00000519824 PTF1AQ7RTS3 328 aa14.45□□□□□ -0.1
FAM49B-215ENST00000519824 PRDM10Q9NQV6 1147 aa14.45□□□□□ -0.1
FAM49B-215ENST00000519824 USP32Q8NFA0 1604 aa14.44□□□□□ -0.1
FAM49B-215ENST00000519824 RASGRF1Q13972 1273 aa14.44□□□□□ -0.1
FAM49B-215ENST00000519824 CNNM3Q8NE01 707 aa14.44□□□□□ -0.1
FAM49B-215ENST00000519824 SPTLC2O15270 562 aa14.44□□□□□ -0.1
FAM49B-215ENST00000519824 AMOTL1Q8IY63 956 aa14.44□□□□□ -0.1
FAM49B-215ENST00000519824 CBX8Q9HC52 389 aa14.44□□□□□ -0.1
FAM49B-215ENST00000519824 DLG5Q8TDM6 1919 aa14.44□□□□□ -0.1
FAM49B-215ENST00000519824 MAGEB6P1A0A0J9YX57 407 aa14.44□□□□□ -0.1
FAM49B-215ENST00000519824 TTF1Q15361 905 aaPredicted RBP14.44□□□□□ -0.1
FAM49B-215ENST00000519824 RTN1Q16799 776 aa14.44□□□□□ -0.1
FAM49B-215ENST00000519824 OLFM4Q6UX06 510 aa14.44□□□□□ -0.1
FAM49B-215ENST00000519824 TM6SF1Q9BZW5 370 aa14.44□□□□□ -0.1
FAM49B-215ENST00000519824 ZKSCAN5Q9Y2L8 839 aa14.44□□□□□ -0.1
FAM49B-215ENST00000519824 PEAK1Q9H792 1746 aa14.43□□□□□ -0.1
FAM49B-215ENST00000519824 ZFYP08048 801 aaPredicted RBP14.43□□□□□ -0.1
FAM49B-215ENST00000519824 ZNF827Q17R98 1081 aa14.43□□□□□ -0.1
FAM49B-215ENST00000519824 MSL1Q68DK7 614 aa14.43□□□□□ -0.1
FAM49B-215ENST00000519824 TMC6Q7Z403 805 aa14.43□□□□□ -0.1
FAM49B-215ENST00000519824 NSUN7Q8NE18 718 aaKnown RBP14.43□□□□□ -0.1
FAM49B-215ENST00000519824 ZNF622Q969S3 477 aaKnown RBP eCLIP14.43□□□□□ -0.1
FAM49B-215ENST00000519824 CABP5Q9NP86 173 aa14.43□□□□□ -0.1
FAM49B-215ENST00000519824 MAPK8IP1Q9UQF2 711 aa14.43□□□□□ -0.1
FAM49B-215ENST00000519824 FAM170AA1A519 330 aa14.43□□□□□ -0.1
FAM49B-215ENST00000519824 SMIM22K7EJ46 135 aa14.43□□□□□ -0.1
FAM49B-215ENST00000519824 LCORLQ8N3X6 602 aa14.43□□□□□ -0.1
FAM49B-215ENST00000519824 ZNF609O15014 1411 aa14.43□□□□□ -0.1
FAM49B-215ENST00000519824 TNS3Q68CZ2 1445 aa14.43□□□□□ -0.1
FAM49B-215ENST00000519824 SSBP05455 408 aaKnown RBP eCLIP14.43□□□□□ -0.1
FAM49B-215ENST00000519824 UQCRFS1P1P0C7P4 283 aa14.43□□□□□ -0.1
FAM49B-215ENST00000519824 FAM200AQ8TCP9 573 aa14.43□□□□□ -0.1
FAM49B-215ENST00000519824 LPIN2Q92539 896 aa14.43□□□□□ -0.1
FAM49B-215ENST00000519824 RPGRQ92834 1020 aaKnown RBP14.43□□□□□ -0.1
FAM49B-215ENST00000519824 DDX19AQ9NUU7 478 aaKnown RBP14.43□□□□□ -0.1
FAM49B-215ENST00000519824 UBR1Q8IWV7 1749 aa14.42□□□□□ -0.1
FAM49B-215ENST00000519824 NRXN3Q9Y4C0 1643 aa14.42□□□□□ -0.1
FAM49B-215ENST00000519824 TOM1O60784 492 aa14.42□□□□□ -0.1
FAM49B-215ENST00000519824 CYP19A1P11511 503 aaPredicted RBP14.42□□□□□ -0.1
FAM49B-215ENST00000519824 VPS54Q9P1Q0 977 aa14.42□□□□□ -0.1
FAM49B-215ENST00000519824 V9GY48 417 aaPredicted RBP14.42□□□□□ -0.1
FAM49B-215ENST00000519824 USP17L12C9JPN9 530 aa14.42□□□□□ -0.1
FAM49B-215ENST00000519824 USP17L21D6R901 530 aa14.42□□□□□ -0.1
FAM49B-215ENST00000519824 SYKP43405 635 aa14.42□□□□□ -0.1
FAM49B-215ENST00000519824 IQCA1Q86XH1 822 aa14.42□□□□□ -0.1
FAM49B-215ENST00000519824 ANGEL1Q9UNK9 670 aaKnown RBP14.42□□□□□ -0.1
FAM49B-215ENST00000519824 RTCBQ9Y3I0 505 aaKnown RBP14.42□□□□□ -0.1
FAM49B-215ENST00000519824 NLRP5P59047 1200 aa14.42□□□□□ -0.1
FAM49B-215ENST00000519824 MRPS27Q92552 414 aaKnown RBP14.42□□□□□ -0.1
FAM49B-215ENST00000519824 NAT10Q9H0A0 1025 aaKnown RBP14.42□□□□□ -0.1
FAM49B-215ENST00000519824 ZHX3Q9H4I2 956 aa14.42□□□□□ -0.1
FAM49B-215ENST00000519824 BTBD18B2RXH4 712 aa14.41□□□□□ -0.1
FAM49B-215ENST00000519824 IFIT1BQ5T764 474 aaKnown RBP14.41□□□□□ -0.1
FAM49B-215ENST00000519824 CDKL5O76039 1030 aa14.41□□□□□ -0.1
FAM49B-215ENST00000519824 ZNF174Q15697 407 aa14.41□□□□□ -0.1
FAM49B-215ENST00000519824 KRT40Q6A162 431 aa14.41□□□□□ -0.1
FAM49B-215ENST00000519824 TBC1D10CQ8IV04 446 aa14.41□□□□□ -0.1
FAM49B-215ENST00000519824 IFNL3Q8IZI9 196 aa14.41□□□□□ -0.1
FAM49B-215ENST00000519824 ST3GAL1Q11201 340 aa14.41□□□□□ -0.1
FAM49B-215ENST00000519824 NOLC1Q14978 699 aaKnown RBP eCLIP14.41□□□□□ -0.1
FAM49B-215ENST00000519824 DHX58Q96C10 678 aa14.41□□□□□ -0.1
FAM49B-215ENST00000519824 XBP1P17861 261 aa14.4□□□□□ -0.1
FAM49B-215ENST00000519824 GOLGA8FQ08AF8 430 aa14.4□□□□□ -0.1
FAM49B-215ENST00000519824 GOLGA8DPQ0D2H9 430 aa14.4□□□□□ -0.1
FAM49B-215ENST00000519824 ARID5BQ14865 1188 aa14.4□□□□□ -0.1
FAM49B-215ENST00000519824 CTCFLQ8NI51 663 aaPredicted RBP14.4□□□□□ -0.1
FAM49B-215ENST00000519824 CELF1Q92879 486 aaKnown RBP14.4□□□□□ -0.1
FAM49B-215ENST00000519824 DNAJC5Q9H3Z4 198 aa14.4□□□□□ -0.1
FAM49B-215ENST00000519824 ZSCAN16Q9H4T2 348 aaPredicted RBP14.4□□□□□ -0.1
FAM49B-215ENST00000519824 RPAP1Q9BWH6 1393 aaPredicted RBP14.4□□□□□ -0.1
FAM49B-215ENST00000519824 PGBD1Q96JS3 809 aa14.4□□□□□ -0.1
FAM49B-215ENST00000519824 SLC4A9Q96Q91 983 aa14.4□□□□□ -0.1
FAM49B-215ENST00000519824 CPVLQ9H3G5 476 aa14.4□□□□□ -0.1
FAM49B-215ENST00000519824 USP21Q9UK80 565 aa14.4□□□□□ -0.1
FAM49B-215ENST00000519824 SRCAPQ6ZRS2 3230 aa14.39□□□□□ -0.11
FAM49B-215ENST00000519824 GOLGB1Q14789 3259 aaKnown RBP14.39□□□□□ -0.11
FAM49B-215ENST00000519824 NR5A1Q13285 461 aa14.39□□□□□ -0.11
FAM49B-215ENST00000519824 DIXDC1Q155Q3 683 aa14.39□□□□□ -0.11
FAM49B-215ENST00000519824 CYB5R4Q7L1T6 521 aa14.39□□□□□ -0.11
FAM49B-215ENST00000519824 MAPKAPK5Q8IW41 473 aa14.39□□□□□ -0.11
FAM49B-215ENST00000519824 TRMT44Q8IYL2 757 aaKnown RBP14.39□□□□□ -0.11
FAM49B-215ENST00000519824 NOC3LQ8WTT2 800 aaKnown RBP14.39□□□□□ -0.11
FAM49B-215ENST00000519824 MRVI1Q9Y6F6 885 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms