RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 TBC1D16Q8TBP0 767 aa9.3□□□□□ -0.92
CTNNA1-216ENST00000519489 NSFL1CQ9UNZ2 370 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-216ENST00000519489 C6orf229H3BNL8 230 aa9.29□□□□□ -0.92
CTNNA1-216ENST00000519489 GTPBP6O43824 516 aaPredicted RBP9.29□□□□□ -0.92
CTNNA1-216ENST00000519489 TBC1D12O60347 775 aa9.29□□□□□ -0.92
CTNNA1-216ENST00000519489 USP2O75604 605 aaPredicted RBP9.29□□□□□ -0.92
CTNNA1-216ENST00000519489 HMOX1P09601 288 aa9.29□□□□□ -0.92
CTNNA1-216ENST00000519489 PSMC4P43686 418 aa9.29□□□□□ -0.92
CTNNA1-216ENST00000519489 PRMT2P55345 433 aa9.29□□□□□ -0.92
CTNNA1-216ENST00000519489 POTEEQ6S8J3 1075 aa9.29□□□□□ -0.92
CTNNA1-216ENST00000519489 CELF1Q92879 486 aaKnown RBP9.29□□□□□ -0.92
CTNNA1-216ENST00000519489 ZBED3Q96IU2 234 aaPredicted RBP9.29□□□□□ -0.92
CTNNA1-216ENST00000519489 PAK6Q9NQU5 681 aaPredicted RBP9.29□□□□□ -0.92
CTNNA1-216ENST00000519489 GABRQQ9UN88 632 aa9.29□□□□□ -0.92
CTNNA1-216ENST00000519489 MAP3K15Q6ZN16 1313 aa9.29□□□□□ -0.92
CTNNA1-216ENST00000519489 CCL15-CCL14A0A0B4J2E2 113 aa9.28□□□□□ -0.92
CTNNA1-216ENST00000519489 ERVV-1B6SEH8 477 aa9.28□□□□□ -0.92
CTNNA1-216ENST00000519489 PRKCZQ05513 592 aa9.28□□□□□ -0.92
CTNNA1-216ENST00000519489 CCL15Q16663 113 aa9.28□□□□□ -0.92
CTNNA1-216ENST00000519489 C17orf99Q6UX52 265 aa9.28□□□□□ -0.92
CTNNA1-216ENST00000519489 PODNQ7Z5L7 613 aa9.28□□□□□ -0.92
CTNNA1-216ENST00000519489 NECAB2Q7Z6G3 386 aa9.28□□□□□ -0.92
CTNNA1-216ENST00000519489 RAET1EQ8TD07 263 aa9.28□□□□□ -0.92
CTNNA1-216ENST00000519489 NECTIN2Q92692 538 aa9.28□□□□□ -0.92
CTNNA1-216ENST00000519489 OPTNQ96CV9 577 aa9.28□□□□□ -0.92
CTNNA1-216ENST00000519489 ZBTB3Q9H5J0 574 aa9.28□□□□□ -0.92
CTNNA1-216ENST00000519489 ELP3Q9H9T3 547 aa9.28□□□□□ -0.92
CTNNA1-216ENST00000519489 BIN2Q9UBW5 565 aaPredicted RBP9.28□□□□□ -0.92
CTNNA1-216ENST00000519489 USP34Q70CQ2 3546 aa9.28□□□□□ -0.92
CTNNA1-216ENST00000519489 AOX1Q06278 1338 aa9.28□□□□□ -0.92
CTNNA1-216ENST00000519489 CFAP54Q96N23 3096 aa9.28□□□□□ -0.92
CTNNA1-216ENST00000519489 FAM86C2PA6NEL3 165 aa9.27□□□□□ -0.93
CTNNA1-216ENST00000519489 GNRH1P01148 92 aa9.27□□□□□ -0.93
CTNNA1-216ENST00000519489 ELNP15502 786 aa9.27□□□□□ -0.93
CTNNA1-216ENST00000519489 GRIN2CQ14957 1233 aa9.27□□□□□ -0.93
CTNNA1-216ENST00000519489 ATXN2LQ8WWM7 1075 aaKnown RBP9.27□□□□□ -0.93
CTNNA1-216ENST00000519489 CPA4Q9UI42 421 aa9.27□□□□□ -0.93
CTNNA1-216ENST00000519489 LRRC37AA6NMS7 1700 aa9.27□□□□□ -0.93
CTNNA1-216ENST00000519489 PFASO15067 1338 aa9.27□□□□□ -0.93
CTNNA1-216ENST00000519489 MYPNQ86TC9 1320 aa9.27□□□□□ -0.93
CTNNA1-216ENST00000519489 WDFY4Q6ZS81 3184 aa9.26□□□□□ -0.93
CTNNA1-216ENST00000519489 INHAP05111 366 aa9.26□□□□□ -0.93
CTNNA1-216ENST00000519489 SNRPA1P09661 255 aaKnown RBP9.26□□□□□ -0.93
CTNNA1-216ENST00000519489 UBXN2AP68543 259 aa9.26□□□□□ -0.93
CTNNA1-216ENST00000519489 TEFQ10587 303 aa9.26□□□□□ -0.93
CTNNA1-216ENST00000519489 PPP1R15BQ5SWA1 713 aa9.26□□□□□ -0.93
CTNNA1-216ENST00000519489 C9orf50Q5SZB4 431 aa9.26□□□□□ -0.93
CTNNA1-216ENST00000519489 NBPF12Q5TAG4 269 aaPredicted RBP9.26□□□□□ -0.93
CTNNA1-216ENST00000519489 OXER1Q8TDS5 423 aa9.26□□□□□ -0.93
CTNNA1-216ENST00000519489 DEFB129Q9H1M3 183 aa9.26□□□□□ -0.93
CTNNA1-216ENST00000519489 PCDHAC2Q9Y5I4 1007 aa9.26□□□□□ -0.93
CTNNA1-216ENST00000519489 FAM205AQ6ZU69 1335 aa9.26□□□□□ -0.93
CTNNA1-216ENST00000519489 ADGRA2Q96PE1 1338 aa9.26□□□□□ -0.93
CTNNA1-216ENST00000519489 PKD1L2Q7Z442 2459 aa9.25□□□□□ -0.93
CTNNA1-216ENST00000519489 SIPA1L3O60292 1781 aaPredicted RBP9.25□□□□□ -0.93
CTNNA1-216ENST00000519489 BTBD19C9JJ37 291 aa9.25□□□□□ -0.93
CTNNA1-216ENST00000519489 PDE4AP27815 886 aa9.25□□□□□ -0.93
CTNNA1-216ENST00000519489 NEUROD1Q13562 356 aa9.25□□□□□ -0.93
CTNNA1-216ENST00000519489 SHHQ15465 462 aa9.25□□□□□ -0.93
CTNNA1-216ENST00000519489 DDX46Q7L014 1031 aaKnown RBP9.25□□□□□ -0.93
CTNNA1-216ENST00000519489 ZNF428Q96B54 188 aa9.25□□□□□ -0.93
CTNNA1-216ENST00000519489 CEMIPQ8WUJ3 1361 aa9.24□□□□□ -0.93
CTNNA1-216ENST00000519489 BTBD11A6QL63 1104 aa9.24□□□□□ -0.93
CTNNA1-216ENST00000519489 BMP1P13497 986 aa9.24□□□□□ -0.93
CTNNA1-216ENST00000519489 NHLH1Q02575 133 aa9.24□□□□□ -0.93
CTNNA1-216ENST00000519489 KIF22Q14807 665 aa9.24□□□□□ -0.93
CTNNA1-216ENST00000519489 TMEM31Q5JXX7 168 aa9.24□□□□□ -0.93
CTNNA1-216ENST00000519489 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.24□□□□□ -0.93
CTNNA1-216ENST00000519489 PPM1EQ8WY54 764 aa9.24□□□□□ -0.93
CTNNA1-216ENST00000519489 ARHGAP33O14559 1287 aa9.23□□□□□ -0.93
CTNNA1-216ENST00000519489 ADCY3O60266 1144 aa9.23□□□□□ -0.93
CTNNA1-216ENST00000519489 FMNL1O95466 1100 aaPredicted RBP9.23□□□□□ -0.93
CTNNA1-216ENST00000519489 LRRC26Q2I0M4 334 aa9.23□□□□□ -0.93
CTNNA1-216ENST00000519489 DACT2Q5SW24 774 aa9.23□□□□□ -0.93
CTNNA1-216ENST00000519489 PHOX2BQ99453 314 aa9.23□□□□□ -0.93
CTNNA1-216ENST00000519489 UTP14AQ9BVJ6 771 aaKnown RBP9.23□□□□□ -0.93
CTNNA1-216ENST00000519489 ZDBF2Q9HCK1 2354 aa9.22□□□□□ -0.93
CTNNA1-216ENST00000519489 REV3LO60673 3130 aa9.22□□□□□ -0.93
CTNNA1-216ENST00000519489 USP17L3A6NCW0 530 aa9.22□□□□□ -0.93
CTNNA1-216ENST00000519489 USP17L4A6NCW7 530 aa9.22□□□□□ -0.93
CTNNA1-216ENST00000519489 UNCXA6NJT0 531 aa9.22□□□□□ -0.93
CTNNA1-216ENST00000519489 KRT37O76014 449 aa9.22□□□□□ -0.93
CTNNA1-216ENST00000519489 MRPS5P82675 430 aaKnown RBP9.22□□□□□ -0.93
CTNNA1-216ENST00000519489 GIGYF2Q6Y7W6 1299 aaKnown RBP9.22□□□□□ -0.93
CTNNA1-216ENST00000519489 USP17L1Q7RTZ2 530 aa9.22□□□□□ -0.93
CTNNA1-216ENST00000519489 APOBEC3FQ8IUX4 373 aaKnown RBP9.22□□□□□ -0.93
CTNNA1-216ENST00000519489 EYA3Q99504 573 aa9.22□□□□□ -0.93
CTNNA1-216ENST00000519489 ZC3H12CQ9C0D7 883 aaKnown RBP9.22□□□□□ -0.93
CTNNA1-216ENST00000519489 NBPF3Q9H094 633 aa9.22□□□□□ -0.93
CTNNA1-216ENST00000519489 C11orf49Q9H6J7 331 aa9.22□□□□□ -0.93
CTNNA1-216ENST00000519489 THEGQ9P2T0 379 aa9.22□□□□□ -0.93
CTNNA1-216ENST00000519489 LAMB2P55268 1798 aa9.22□□□□□ -0.93
CTNNA1-216ENST00000519489 PPP1R12BO60237 982 aaPredicted RBP9.21□□□□□ -0.94
CTNNA1-216ENST00000519489 SLC24A1O60721 1099 aa9.21□□□□□ -0.94
CTNNA1-216ENST00000519489 GPR37L1O60883 481 aa9.21□□□□□ -0.94
CTNNA1-216ENST00000519489 PPP4R3BQ5MIZ7 849 aa9.21□□□□□ -0.94
CTNNA1-216ENST00000519489 TMC4Q7Z404 712 aa9.21□□□□□ -0.94
CTNNA1-216ENST00000519489 PPP1R42Q7Z4L9 355 aa9.21□□□□□ -0.94
CTNNA1-216ENST00000519489 ANKRD13AQ8IZ07 590 aa9.21□□□□□ -0.94
CTNNA1-216ENST00000519489 BAHCC1Q9P281 2608 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms