RNA–Protein interactions for RNA: ENST00000517732.5

LINCR-0001-201, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-201ENST00000517732 PLIN1O60240 522 aa11.52□□□□□ -0.57
LINCR-0001-201ENST00000517732 MYCP01106 439 aaPredicted RBP11.52□□□□□ -0.57
LINCR-0001-201ENST00000517732 MYCNP04198 464 aaPredicted RBP11.52□□□□□ -0.57
LINCR-0001-201ENST00000517732 CASP7P55210 303 aa11.52□□□□□ -0.57
LINCR-0001-201ENST00000517732 PRMT2P55345 433 aa11.52□□□□□ -0.57
LINCR-0001-201ENST00000517732 CCDC57Q2TAC2 916 aa11.52□□□□□ -0.57
LINCR-0001-201ENST00000517732 MFSD14BQ5SR56 506 aa11.52□□□□□ -0.57
LINCR-0001-201ENST00000517732 G2E3Q7L622 706 aa11.52□□□□□ -0.57
LINCR-0001-201ENST00000517732 BRI3BPQ8WY22 251 aa11.52□□□□□ -0.57
LINCR-0001-201ENST00000517732 TSR2Q969E8 191 aaKnown RBP11.52□□□□□ -0.57
LINCR-0001-201ENST00000517732 OTUD5Q96G74 571 aa11.52□□□□□ -0.57
LINCR-0001-201ENST00000517732 MS4A4AQ96JQ5 239 aa11.52□□□□□ -0.57
LINCR-0001-201ENST00000517732 TDRD3Q9H7E2 651 aaKnown RBP11.52□□□□□ -0.57
LINCR-0001-201ENST00000517732 CNNM1Q9NRU3 951 aa11.52□□□□□ -0.57
LINCR-0001-201ENST00000517732 SERPINA10Q9UK55 444 aa11.52□□□□□ -0.57
LINCR-0001-201ENST00000517732 IRS2Q9Y4H2 1338 aa11.52□□□□□ -0.57
LINCR-0001-201ENST00000517732 MGAMO43451 1857 aa11.51□□□□□ -0.57
LINCR-0001-201ENST00000517732 TCP10L2B9ZVM9 353 aa11.51□□□□□ -0.57
LINCR-0001-201ENST00000517732 CETPP11597 493 aa11.51□□□□□ -0.57
LINCR-0001-201ENST00000517732 VGLL4Q14135 290 aa11.51□□□□□ -0.57
LINCR-0001-201ENST00000517732 LDHAL6AQ6ZMR3 332 aa11.51□□□□□ -0.57
LINCR-0001-201ENST00000517732 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.51□□□□□ -0.57
LINCR-0001-201ENST00000517732 HOOK2Q96ED9 719 aa11.51□□□□□ -0.57
LINCR-0001-201ENST00000517732 ZCCHC17Q9NP64 241 aaKnown RBP11.51□□□□□ -0.57
LINCR-0001-201ENST00000517732 TMOD2Q9NZR1 351 aa11.51□□□□□ -0.57
LINCR-0001-201ENST00000517732 FAM205AQ6ZU69 1335 aa11.51□□□□□ -0.57
LINCR-0001-201ENST00000517732 H0YGN5 161 aa11.5□□□□□ -0.57
LINCR-0001-201ENST00000517732 TLR2O60603 784 aa11.5□□□□□ -0.57
LINCR-0001-201ENST00000517732 DZIP1LQ8IYY4 767 aaKnown RBP11.5□□□□□ -0.57
LINCR-0001-201ENST00000517732 FAM43AQ8N2R8 423 aa11.5□□□□□ -0.57
LINCR-0001-201ENST00000517732 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.5□□□□□ -0.57
LINCR-0001-201ENST00000517732 NKX2-3Q8TAU0 364 aa11.5□□□□□ -0.57
LINCR-0001-201ENST00000517732 SH3TC2Q8TF17 1288 aa11.5□□□□□ -0.57
LINCR-0001-201ENST00000517732 DPF3Q92784 378 aa11.5□□□□□ -0.57
LINCR-0001-201ENST00000517732 SPDYE5A6NIY4 337 aa11.49□□□□□ -0.57
LINCR-0001-201ENST00000517732 HOXD10P28358 340 aa11.49□□□□□ -0.57
LINCR-0001-201ENST00000517732 HIBADHP31937 336 aaKnown RBP11.49□□□□□ -0.57
LINCR-0001-201ENST00000517732 CRKP46108 304 aa11.49□□□□□ -0.57
LINCR-0001-201ENST00000517732 LACTBP83111 547 aaPredicted RBP11.49□□□□□ -0.57
LINCR-0001-201ENST00000517732 CAP1Q01518 475 aa11.49□□□□□ -0.57
LINCR-0001-201ENST00000517732 SNAPC2Q13487 334 aa11.49□□□□□ -0.57
LINCR-0001-201ENST00000517732 UBE4AQ14139 1066 aa11.49□□□□□ -0.57
LINCR-0001-201ENST00000517732 CHRDL2Q6WN34 429 aa11.49□□□□□ -0.57
LINCR-0001-201ENST00000517732 TDRD7Q8NHU6 1098 aaKnown RBP11.49□□□□□ -0.57
LINCR-0001-201ENST00000517732 TEPSINQ96N21 525 aa11.49□□□□□ -0.57
LINCR-0001-201ENST00000517732 HTATIP2Q9BUP3 242 aa11.49□□□□□ -0.57
LINCR-0001-201ENST00000517732 TMEM39BQ9GZU3 492 aa11.49□□□□□ -0.57
LINCR-0001-201ENST00000517732 AOX1Q06278 1338 aa11.49□□□□□ -0.57
LINCR-0001-201ENST00000517732 HTTP42858 3142 aa11.48□□□□□ -0.57
LINCR-0001-201ENST00000517732 FRAT2O75474 233 aaPredicted RBP11.48□□□□□ -0.57
LINCR-0001-201ENST00000517732 FOXO4P98177 505 aa11.48□□□□□ -0.57
LINCR-0001-201ENST00000517732 DCAF15Q66K64 600 aa11.48□□□□□ -0.57
LINCR-0001-201ENST00000517732 LMBR1LQ6UX01 489 aa11.48□□□□□ -0.57
LINCR-0001-201ENST00000517732 VPS37DQ86XT2 251 aa11.48□□□□□ -0.57
LINCR-0001-201ENST00000517732 ERO1BQ86YB8 467 aa11.48□□□□□ -0.57
LINCR-0001-201ENST00000517732 TBC1D22AQ8WUA7 517 aa11.48□□□□□ -0.57
LINCR-0001-201ENST00000517732 WRNIP1Q96S55 665 aa11.48□□□□□ -0.57
LINCR-0001-201ENST00000517732 PRKRIP1Q9H875 184 aaPredicted RBP11.48□□□□□ -0.57
LINCR-0001-201ENST00000517732 MAST3O60307 1309 aa11.47□□□□□ -0.57
LINCR-0001-201ENST00000517732 GYG1P46976 350 aa11.47□□□□□ -0.57
LINCR-0001-201ENST00000517732 PPIL2Q13356 520 aa11.47□□□□□ -0.57
LINCR-0001-201ENST00000517732 CCDC27Q2M243 656 aa11.47□□□□□ -0.57
LINCR-0001-201ENST00000517732 RAET1EQ8TD07 263 aa11.47□□□□□ -0.57
LINCR-0001-201ENST00000517732 TEKT1Q969V4 418 aa11.47□□□□□ -0.57
LINCR-0001-201ENST00000517732 ZNF594Q96JF6 807 aaPredicted RBP11.47□□□□□ -0.57
LINCR-0001-201ENST00000517732 ARHGAP39Q9C0H5 1083 aa11.47□□□□□ -0.57
LINCR-0001-201ENST00000517732 SNCAIPQ9Y6H5 919 aa11.47□□□□□ -0.57
LINCR-0001-201ENST00000517732 MKI67P46013 3256 aaKnown RBP11.47□□□□□ -0.57
LINCR-0001-201ENST00000517732 CENPFP49454 3210 aa11.47□□□□□ -0.57
LINCR-0001-201ENST00000517732 IL16Q14005 1332 aa11.46□□□□□ -0.57
LINCR-0001-201ENST00000517732 BTBD19C9JJ37 291 aa11.46□□□□□ -0.57
LINCR-0001-201ENST00000517732 UBXN2AP68543 259 aa11.46□□□□□ -0.57
LINCR-0001-201ENST00000517732 HDLBPQ00341 1268 aaKnown RBP11.46□□□□□ -0.57
LINCR-0001-201ENST00000517732 CDAN1Q8IWY9 1227 aa11.46□□□□□ -0.57
LINCR-0001-201ENST00000517732 TRIM47Q96LD4 638 aa11.46□□□□□ -0.57
LINCR-0001-201ENST00000517732 C9orf78Q9NZ63 289 aaPredicted RBP11.46□□□□□ -0.57
LINCR-0001-201ENST00000517732 NR2E3Q9Y5X4 410 aa11.46□□□□□ -0.57
LINCR-0001-201ENST00000517732 MYPNQ86TC9 1320 aa11.45□□□□□ -0.58
LINCR-0001-201ENST00000517732 GRM8O00222 908 aa11.45□□□□□ -0.58
LINCR-0001-201ENST00000517732 IRF6O14896 467 aa11.45□□□□□ -0.58
LINCR-0001-201ENST00000517732 ECM2O94769 699 aaPredicted RBP11.45□□□□□ -0.58
LINCR-0001-201ENST00000517732 FMNL1O95466 1100 aaPredicted RBP11.45□□□□□ -0.58
LINCR-0001-201ENST00000517732 GRK4P32298 578 aa11.45□□□□□ -0.58
LINCR-0001-201ENST00000517732 PSMC4P43686 418 aa11.45□□□□□ -0.58
LINCR-0001-201ENST00000517732 PPATQ06203 517 aa11.45□□□□□ -0.58
LINCR-0001-201ENST00000517732 CHAF1AQ13111 956 aaPredicted RBP11.45□□□□□ -0.58
LINCR-0001-201ENST00000517732 CAVIN4Q5BKX8 364 aa11.45□□□□□ -0.58
LINCR-0001-201ENST00000517732 FAM83AQ86UY5 434 aa11.45□□□□□ -0.58
LINCR-0001-201ENST00000517732 WWC1Q8IX03 1113 aa11.45□□□□□ -0.58
LINCR-0001-201ENST00000517732 FAM84BQ96KN1 310 aaPredicted RBP11.45□□□□□ -0.58
LINCR-0001-201ENST00000517732 ZNF341Q9BYN7 854 aa11.45□□□□□ -0.58
LINCR-0001-201ENST00000517732 SPINK5Q9NQ38 1064 aaPredicted RBP11.45□□□□□ -0.58
LINCR-0001-201ENST00000517732 BIN2Q9UBW5 565 aaPredicted RBP11.45□□□□□ -0.58
LINCR-0001-201ENST00000517732 SRRDQ9UH36 339 aa11.45□□□□□ -0.58
LINCR-0001-201ENST00000517732 DOCK2Q92608 1830 aa11.44□□□□□ -0.58
LINCR-0001-201ENST00000517732 RPAP1Q9BWH6 1393 aaPredicted RBP11.44□□□□□ -0.58
LINCR-0001-201ENST00000517732 MROH5Q6ZUA9 1318 aa11.44□□□□□ -0.58
LINCR-0001-201ENST00000517732 MTFR1Q15390 333 aa11.44□□□□□ -0.58
LINCR-0001-201ENST00000517732 BEND3Q5T5X7 828 aa11.44□□□□□ -0.58
LINCR-0001-201ENST00000517732 FKBP1CQ5VVH2 108 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms