RNA–Protein interactions for RNA: ENST00000515143.5

SPOCK3-223, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, human

TSL 4

Gene SPOCK3, Length 565 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOCK3-223	ENST00000515143	TEPSIN	Q96N21	525 aa		9.06	□□□□□ -0.96
SPOCK3-223	ENST00000515143	PDS5A	Q29RF7	1337 aa	Known RBP	9.05	□□□□□ -0.96
SPOCK3-223	ENST00000515143	SALL1	Q9NSC2	1324 aa		9.05	□□□□□ -0.96
SPOCK3-223	ENST00000515143	TESPA1	A2RU30	521 aa	Predicted RBP	9.05	□□□□□ -0.96
SPOCK3-223	ENST00000515143	SEMA3E	O15041	775 aa		9.05	□□□□□ -0.96
SPOCK3-223	ENST00000515143	PPP1R12B	O60237	982 aa	Predicted RBP	9.05	□□□□□ -0.96
SPOCK3-223	ENST00000515143	ZBTB48	P10074	688 aa	Predicted RBP	9.05	□□□□□ -0.96
SPOCK3-223	ENST00000515143	IL15	P40933	162 aa	Predicted RBP	9.05	□□□□□ -0.96
SPOCK3-223	ENST00000515143	BCAM	P50895	628 aa		9.05	□□□□□ -0.96
SPOCK3-223	ENST00000515143	TNFAIP1	Q13829	316 aa		9.05	□□□□□ -0.96
SPOCK3-223	ENST00000515143	RASA3	Q14644	834 aa		9.05	□□□□□ -0.96
SPOCK3-223	ENST00000515143	SPRYD7	Q5W111	196 aa		9.05	□□□□□ -0.96
SPOCK3-223	ENST00000515143	APOBEC3H	Q6NTF7	200 aa	Known RBP	9.05	□□□□□ -0.96
SPOCK3-223	ENST00000515143	MOB2	Q70IA6	237 aa		9.05	□□□□□ -0.96
SPOCK3-223	ENST00000515143	FAM83A	Q86UY5	434 aa		9.05	□□□□□ -0.96
SPOCK3-223	ENST00000515143	WDR66	Q8TBY9	1149 aa		9.05	□□□□□ -0.96
SPOCK3-223	ENST00000515143	FAM163A	Q96GL9	167 aa	Predicted RBP	9.05	□□□□□ -0.96
SPOCK3-223	ENST00000515143	ABHD8	Q96I13	439 aa		9.05	□□□□□ -0.96
SPOCK3-223	ENST00000515143	ZNF70	Q9UC06	446 aa	Predicted RBP	9.05	□□□□□ -0.96
SPOCK3-223	ENST00000515143	TTF2	Q9UNY4	1162 aa	Known RBP	9.05	□□□□□ -0.96
SPOCK3-223	ENST00000515143	PCDHAC2	Q9Y5I4	1007 aa		9.05	□□□□□ -0.96
SPOCK3-223	ENST00000515143	AOX1	Q06278	1338 aa		9.05	□□□□□ -0.96
SPOCK3-223	ENST00000515143	CRK	P46108	304 aa		9.04	□□□□□ -0.96
SPOCK3-223	ENST00000515143	GRIK5	Q16478	980 aa		9.04	□□□□□ -0.96
SPOCK3-223	ENST00000515143	ATF7IP	Q6VMQ6	1270 aa		9.04	□□□□□ -0.96
SPOCK3-223	ENST00000515143	KLHDC4	Q8TBB5	520 aa		9.04	□□□□□ -0.96
SPOCK3-223	ENST00000515143	FBXW7	Q969H0	707 aa		9.04	□□□□□ -0.96
SPOCK3-223	ENST00000515143	CEP126	Q9P2H0	1117 aa		9.04	□□□□□ -0.96
SPOCK3-223	ENST00000515143	SSC5D	A1L4H1	1573 aa		9.03	□□□□□ -0.96
SPOCK3-223	ENST00000515143	MANSC4	A6NHS7	340 aa	Predicted RBP	9.03	□□□□□ -0.96
SPOCK3-223	ENST00000515143	IGSF3	O75054	1194 aa		9.03	□□□□□ -0.96
SPOCK3-223	ENST00000515143	TRPA1	O75762	1119 aa		9.03	□□□□□ -0.96
SPOCK3-223	ENST00000515143	ALDH1A1	P00352	501 aa		9.03	□□□□□ -0.96
SPOCK3-223	ENST00000515143	SLC5A1	P13866	664 aa		9.03	□□□□□ -0.96
SPOCK3-223	ENST00000515143	TRIM27	P14373	513 aa		9.03	□□□□□ -0.96
SPOCK3-223	ENST00000515143	MAP3K10	Q02779	954 aa		9.03	□□□□□ -0.96
SPOCK3-223	ENST00000515143	SREBF2	Q12772	1141 aa		9.03	□□□□□ -0.96
SPOCK3-223	ENST00000515143	GRM1	Q13255	1194 aa		9.03	□□□□□ -0.96
SPOCK3-223	ENST00000515143	PKN2	Q16513	984 aa	Known RBP	9.03	□□□□□ -0.96
SPOCK3-223	ENST00000515143	NBPF12	Q5TAG4	269 aa	Predicted RBP	9.03	□□□□□ -0.96
SPOCK3-223	ENST00000515143	VPS37D	Q86XT2	251 aa		9.03	□□□□□ -0.96
SPOCK3-223	ENST00000515143	MIER1	Q8N108	512 aa		9.03	□□□□□ -0.96
SPOCK3-223	ENST00000515143	SLC10A4	Q96EP9	437 aa		9.03	□□□□□ -0.96
SPOCK3-223	ENST00000515143	MEIS3	Q99687	375 aa		9.03	□□□□□ -0.96
SPOCK3-223	ENST00000515143	TDRD3	Q9H7E2	651 aa	Known RBP	9.03	□□□□□ -0.96
SPOCK3-223	ENST00000515143	SCAF8	Q9UPN6	1271 aa	Known RBP	9.03	□□□□□ -0.96
SPOCK3-223	ENST00000515143	LRRFIP2	Q9Y608	721 aa	Known RBP	9.03	□□□□□ -0.96
SPOCK3-223	ENST00000515143	ECM29	Q5VYK3	1845 aa		9.03	□□□□□ -0.96
SPOCK3-223	ENST00000515143	MAST3	O60307	1309 aa		9.03	□□□□□ -0.96
SPOCK3-223	ENST00000515143	ANKRD13A	Q8IZ07	590 aa		9.02	□□□□□ -0.97
SPOCK3-223	ENST00000515143	TEKT1	Q969V4	418 aa		9.02	□□□□□ -0.97
SPOCK3-223	ENST00000515143	MS4A4A	Q96JQ5	239 aa		9.02	□□□□□ -0.97
SPOCK3-223	ENST00000515143	ANGEL1	Q9UNK9	670 aa	Known RBP	9.02	□□□□□ -0.97
SPOCK3-223	ENST00000515143	LAMB1	P07942	1786 aa		9.01	□□□□□ -0.97
SPOCK3-223	ENST00000515143		F8W031	263 aa	Predicted RBP	9.01	□□□□□ -0.97
SPOCK3-223	ENST00000515143	BCAR3	O75815	825 aa		9.01	□□□□□ -0.97
SPOCK3-223	ENST00000515143	MAP4K4	O95819	1239 aa	Predicted RBP	9.01	□□□□□ -0.97
SPOCK3-223	ENST00000515143	IREB2	P48200	963 aa	Known RBP	9.01	□□□□□ -0.97
SPOCK3-223	ENST00000515143	TNNI2	P48788	182 aa		9.01	□□□□□ -0.97
SPOCK3-223	ENST00000515143	ATP2B3	Q16720	1220 aa		9.01	□□□□□ -0.97
SPOCK3-223	ENST00000515143	DIEXF	Q68CQ4	756 aa	Known RBP	9.01	□□□□□ -0.97
SPOCK3-223	ENST00000515143	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	9.01	□□□□□ -0.97
SPOCK3-223	ENST00000515143	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	9.01	□□□□□ -0.97
SPOCK3-223	ENST00000515143	HOOK2	Q96ED9	719 aa		9.01	□□□□□ -0.97
SPOCK3-223	ENST00000515143	MCOLN1	Q9GZU1	580 aa		9.01	□□□□□ -0.97
SPOCK3-223	ENST00000515143	GPR108	Q9NPR9	543 aa		9.01	□□□□□ -0.97
SPOCK3-223	ENST00000515143	GNL3L	Q9NVN8	582 aa	Known RBP	9.01	□□□□□ -0.97
SPOCK3-223	ENST00000515143	TSKS	Q9UJT2	592 aa		9.01	□□□□□ -0.97
SPOCK3-223	ENST00000515143	ZNF112	Q9UJU3	913 aa		9.01	□□□□□ -0.97
SPOCK3-223	ENST00000515143	DENND2A	Q9ULE3	1009 aa		9.01	□□□□□ -0.97
SPOCK3-223	ENST00000515143	AKAP2	Q9Y2D5	859 aa		9.01	□□□□□ -0.97
SPOCK3-223	ENST00000515143	CASP8AP2	Q9UKL3	1982 aa		9.01	□□□□□ -0.97
SPOCK3-223	ENST00000515143	RPAP1	Q9BWH6	1393 aa	Predicted RBP	9	□□□□□ -0.97
SPOCK3-223	ENST00000515143	AKAP11	Q9UKA4	1901 aa		9	□□□□□ -0.97
SPOCK3-223	ENST00000515143	CLRN2	A0PK11	232 aa		9	□□□□□ -0.97
SPOCK3-223	ENST00000515143	GPR25	O00155	361 aa		9	□□□□□ -0.97
SPOCK3-223	ENST00000515143	ZBTB7B	O15156	539 aa	Predicted RBP	9	□□□□□ -0.97
SPOCK3-223	ENST00000515143	GNAI2	P04899	355 aa		9	□□□□□ -0.97
SPOCK3-223	ENST00000515143	GJA5	P36382	358 aa		9	□□□□□ -0.97
SPOCK3-223	ENST00000515143	MAP3K9	P80192	1104 aa		9	□□□□□ -0.97
SPOCK3-223	ENST00000515143	CCDC102B	Q68D86	513 aa		9	□□□□□ -0.97
SPOCK3-223	ENST00000515143	CTU1	Q7Z7A3	348 aa	Known RBP	9	□□□□□ -0.97
SPOCK3-223	ENST00000515143	IFNL1	Q8IU54	200 aa		9	□□□□□ -0.97
SPOCK3-223	ENST00000515143	SSH3	Q8TE77	659 aa		9	□□□□□ -0.97
SPOCK3-223	ENST00000515143	FAM151A	Q8WW52	585 aa		9	□□□□□ -0.97
SPOCK3-223	ENST00000515143	WNK4	Q96J92	1243 aa		9	□□□□□ -0.97
SPOCK3-223	ENST00000515143	IDI2	Q9BXS1	227 aa		9	□□□□□ -0.97
SPOCK3-223	ENST00000515143	ZCCHC17	Q9NP64	241 aa	Known RBP	9	□□□□□ -0.97
SPOCK3-223	ENST00000515143	JAG2	Q9Y219	1238 aa		9	□□□□□ -0.97
SPOCK3-223	ENST00000515143	NOP58	Q9Y2X3	529 aa	Known RBP	9	□□□□□ -0.97
SPOCK3-223	ENST00000515143	CENPF	P49454	3210 aa		9	□□□□□ -0.97
SPOCK3-223	ENST00000515143	GAK	O14976	1311 aa		9	□□□□□ -0.97
SPOCK3-223	ENST00000515143	SRGAP3	O43295	1099 aa		8.99	□□□□□ -0.97
SPOCK3-223	ENST00000515143	FRAT2	O75474	233 aa	Predicted RBP	8.99	□□□□□ -0.97
SPOCK3-223	ENST00000515143	PHKA1	P46020	1223 aa		8.99	□□□□□ -0.97
SPOCK3-223	ENST00000515143	RBM5	P52756	815 aa	Known RBP eCLIP	8.99	□□□□□ -0.97
SPOCK3-223	ENST00000515143	TIMM10	P62072	90 aa		8.99	□□□□□ -0.97
SPOCK3-223	ENST00000515143	ATP8B2	P98198	1209 aa		8.99	□□□□□ -0.97
SPOCK3-223	ENST00000515143	DGKZ	Q13574	1117 aa		8.99	□□□□□ -0.97
SPOCK3-223	ENST00000515143	TTLL12	Q14166	644 aa	Predicted RBP	8.99	□□□□□ -0.97

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