RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 SEC31BQ9NQW1 1179 aa16.1■□□□□ 0.17
SDHA-215ENST00000512962 FZD1Q9UP38 647 aa16.1■□□□□ 0.17
SDHA-215ENST00000512962 ATP5J2-PTCD1G3V325 749 aa16.09■□□□□ 0.17
SDHA-215ENST00000512962 CLK2P49760 499 aaKnown RBP16.09■□□□□ 0.17
SDHA-215ENST00000512962 NBPF9Q3BBW0 867 aa16.09■□□□□ 0.17
SDHA-215ENST00000512962 NOM1Q5C9Z4 860 aaKnown RBP16.09■□□□□ 0.17
SDHA-215ENST00000512962 ISCA1Q9BUE6 129 aa16.09■□□□□ 0.17
SDHA-215ENST00000512962 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.09■□□□□ 0.17
SDHA-215ENST00000512962 MXD3Q9BW11 206 aa16.09■□□□□ 0.17
SDHA-215ENST00000512962 MYOZ2Q9NPC6 264 aa16.09■□□□□ 0.17
SDHA-215ENST00000512962 SZT2Q5T011 3432 aa16.09■□□□□ 0.17
SDHA-215ENST00000512962 UFL1O94874 794 aa16.08■□□□□ 0.16
SDHA-215ENST00000512962 CD46P15529 392 aa16.08■□□□□ 0.16
SDHA-215ENST00000512962 EYA3Q99504 573 aa16.08■□□□□ 0.16
SDHA-215ENST00000512962 PITPNM2Q9BZ72 1349 aa16.08■□□□□ 0.16
SDHA-215ENST00000512962 FKTNO75072 461 aa16.07■□□□□ 0.16
SDHA-215ENST00000512962 PTPN12Q05209 780 aaKnown RBP16.07■□□□□ 0.16
SDHA-215ENST00000512962 CFHR5Q9BXR6 569 aa16.07■□□□□ 0.16
SDHA-215ENST00000512962 TMEM134Q9H6X4 195 aa16.07■□□□□ 0.16
SDHA-215ENST00000512962 PODXL2Q9NZ53 605 aa16.07■□□□□ 0.16
SDHA-215ENST00000512962 CHPF2Q9P2E5 772 aa16.07■□□□□ 0.16
SDHA-215ENST00000512962 ZSWIM8A7E2V4 1837 aa16.06■□□□□ 0.16
SDHA-215ENST00000512962 SSC5DA1L4H1 1573 aa16.06■□□□□ 0.16
SDHA-215ENST00000512962 SMAPO00193 183 aa16.06■□□□□ 0.16
SDHA-215ENST00000512962 USP17L8P0C7I0 530 aa16.06■□□□□ 0.16
SDHA-215ENST00000512962 RPS8P62241 208 aaKnown RBP16.06■□□□□ 0.16
SDHA-215ENST00000512962 DIXDC1Q155Q3 683 aa16.06■□□□□ 0.16
SDHA-215ENST00000512962 OTOP1Q7RTM1 612 aa16.06■□□□□ 0.16
SDHA-215ENST00000512962 AGBL3Q8NEM8 1001 aa16.06■□□□□ 0.16
SDHA-215ENST00000512962 ZC3H12CQ9C0D7 883 aaKnown RBP16.06■□□□□ 0.16
SDHA-215ENST00000512962 KIAA0100Q14667 2235 aaKnown RBP16.06■□□□□ 0.16
SDHA-215ENST00000512962 PRKG1Q13976 671 aa16.05■□□□□ 0.16
SDHA-215ENST00000512962 MCM6Q14566 821 aa16.05■□□□□ 0.16
SDHA-215ENST00000512962 SPIRE2Q8WWL2 714 aa16.05■□□□□ 0.16
SDHA-215ENST00000512962 OTOFQ9HC10 1997 aa16.05■□□□□ 0.16
SDHA-215ENST00000512962 DDX11L8A8MPP1 907 aa16.04■□□□□ 0.16
SDHA-215ENST00000512962 SASH1O94885 1247 aa16.04■□□□□ 0.16
SDHA-215ENST00000512962 EN2P19622 333 aaPredicted RBP16.04■□□□□ 0.16
SDHA-215ENST00000512962 CCER1Q8TC90 406 aaPredicted RBP16.04■□□□□ 0.16
SDHA-215ENST00000512962 TRIM17Q9Y577 477 aa16.04■□□□□ 0.16
SDHA-215ENST00000512962 IRS4O14654 1257 aaPredicted RBP16.03■□□□□ 0.16
SDHA-215ENST00000512962 CCDC85AQ96PX6 553 aaPredicted RBP16.03■□□□□ 0.16
SDHA-215ENST00000512962 GGA1Q9UJY5 639 aa16.03■□□□□ 0.16
SDHA-215ENST00000512962 ECM29Q5VYK3 1845 aa16.03■□□□□ 0.16
SDHA-215ENST00000512962 IGF2BP3O00425 579 aaKnown RBP eCLIP16.02■□□□□ 0.16
SDHA-215ENST00000512962 WNT10BO00744 389 aa16.02■□□□□ 0.16
SDHA-215ENST00000512962 SPRYD7Q5W111 196 aa16.02■□□□□ 0.16
SDHA-215ENST00000512962 PLBD2Q8NHP8 589 aa16.02■□□□□ 0.16
SDHA-215ENST00000512962 JARID2Q92833 1246 aaPredicted RBP16.02■□□□□ 0.16
SDHA-215ENST00000512962 ZBED2Q9BTP6 218 aa16.02■□□□□ 0.16
SDHA-215ENST00000512962 ANKIB1Q9P2G1 1089 aa16.02■□□□□ 0.16
SDHA-215ENST00000512962 LIMD1Q9UGP4 676 aa16.02■□□□□ 0.16
SDHA-215ENST00000512962 SREBF2Q12772 1141 aa16.01■□□□□ 0.15
SDHA-215ENST00000512962 DACT2Q5SW24 774 aa16.01■□□□□ 0.15
SDHA-215ENST00000512962 LDLRAD1Q5T700 205 aa16.01■□□□□ 0.15
SDHA-215ENST00000512962 USP17L3A6NCW0 530 aa16■□□□□ 0.15
SDHA-215ENST00000512962 USP17L4A6NCW7 530 aa16■□□□□ 0.15
SDHA-215ENST00000512962 PSEN2P49810 448 aa16■□□□□ 0.15
SDHA-215ENST00000512962 ANKRD13DQ6ZTN6 518 aa16■□□□□ 0.15
SDHA-215ENST00000512962 USP17L1Q7RTZ2 530 aa16■□□□□ 0.15
SDHA-215ENST00000512962 HOMEZQ8IX15 550 aa16■□□□□ 0.15
SDHA-215ENST00000512962 CD99L2Q8TCZ2 262 aa16■□□□□ 0.15
SDHA-215ENST00000512962 CLMNQ96JQ2 1002 aa16■□□□□ 0.15
SDHA-215ENST00000512962 KIAA1468Q9P260 1216 aa16■□□□□ 0.15
SDHA-215ENST00000512962 MYH3P11055 1940 aa16■□□□□ 0.15
SDHA-215ENST00000512962 MAPK8IP3Q9UPT6 1336 aa15.99■□□□□ 0.15
SDHA-215ENST00000512962 TRIOBPQ9H2D6 2365 aa15.99■□□□□ 0.15
SDHA-215ENST00000512962 NEFMP07197 916 aa15.99■□□□□ 0.15
SDHA-215ENST00000512962 RIPK4P57078 832 aa15.99■□□□□ 0.15
SDHA-215ENST00000512962 PTPN22Q9Y2R2 807 aa15.99■□□□□ 0.15
SDHA-215ENST00000512962 A0A1B0GUL6 1792 aa15.98■□□□□ 0.15
SDHA-215ENST00000512962 RIC3Q7Z5B4 369 aa15.98■□□□□ 0.15
SDHA-215ENST00000512962 TXNRD3Q86VQ6 643 aa15.98■□□□□ 0.15
SDHA-215ENST00000512962 CLUAP1Q96AJ1 413 aa15.98■□□□□ 0.15
SDHA-215ENST00000512962 ARMC5Q96C12 935 aa15.98■□□□□ 0.15
SDHA-215ENST00000512962 ANGEL1Q9UNK9 670 aaKnown RBP15.98■□□□□ 0.15
SDHA-215ENST00000512962 PCDHAC2Q9Y5I4 1007 aa15.98■□□□□ 0.15
SDHA-215ENST00000512962 XDHP47989 1333 aa15.97■□□□□ 0.15
SDHA-215ENST00000512962 AOX1Q06278 1338 aa15.97■□□□□ 0.15
SDHA-215ENST00000512962 KLRK1P26718 216 aa15.97■□□□□ 0.15
SDHA-215ENST00000512962 GJA5P36382 358 aa15.97■□□□□ 0.15
SDHA-215ENST00000512962 HDGFL1Q5TGJ6 251 aa15.97■□□□□ 0.15
SDHA-215ENST00000512962 ZBED3Q96IU2 234 aaPredicted RBP15.97■□□□□ 0.15
SDHA-215ENST00000512962 TMPOP42166 694 aaKnown RBP15.96■□□□□ 0.15
SDHA-215ENST00000512962 TRIM28Q13263 835 aaKnown RBP15.96■□□□□ 0.15
SDHA-215ENST00000512962 CRHR2Q13324 411 aa15.96■□□□□ 0.15
SDHA-215ENST00000512962 INTS3Q68E01 1043 aaKnown RBP15.96■□□□□ 0.15
SDHA-215ENST00000512962 PODNQ7Z5L7 613 aa15.96■□□□□ 0.15
SDHA-215ENST00000512962 BABAM1Q9NWV8 329 aa15.96■□□□□ 0.15
SDHA-215ENST00000512962 MED23Q9ULK4 1368 aa15.96■□□□□ 0.15
SDHA-215ENST00000512962 CEP290O15078 2479 aa15.95■□□□□ 0.14
SDHA-215ENST00000512962 A6NJR5 290 aa15.95■□□□□ 0.14
SDHA-215ENST00000512962 CHL1O00533 1208 aa15.95■□□□□ 0.14
SDHA-215ENST00000512962 SPTLC1O15269 473 aa15.95■□□□□ 0.14
SDHA-215ENST00000512962 RFC5P40937 340 aa15.95■□□□□ 0.14
SDHA-215ENST00000512962 VARS2Q5ST30 1063 aaKnown RBP15.95■□□□□ 0.14
SDHA-215ENST00000512962 POTEEQ6S8J3 1075 aa15.95■□□□□ 0.14
SDHA-215ENST00000512962 ZBTB38Q8NAP3 1195 aaPredicted RBP15.95■□□□□ 0.14
SDHA-215ENST00000512962 WNK4Q96J92 1243 aa15.95■□□□□ 0.14
SDHA-215ENST00000512962 RANBP2P49792 3224 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms