RNA–Protein interactions for RNA: ENST00000512147.5

CLDND1-225, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-225ENST00000512147 ANKS1AQ92625 1134 aa8.53□□□□□ -1.04
CLDND1-225ENST00000512147 IRF2BPLQ9H1B7 796 aa8.53□□□□□ -1.04
CLDND1-225ENST00000512147 DEFB129Q9H1M3 183 aa8.53□□□□□ -1.04
CLDND1-225ENST00000512147 SH2B1Q9NRF2 756 aaPredicted RBP8.53□□□□□ -1.04
CLDND1-225ENST00000512147 ATRNL1Q5VV63 1379 aa8.52□□□□□ -1.05
CLDND1-225ENST00000512147 MAP1BP46821 2468 aaKnown RBP8.52□□□□□ -1.05
CLDND1-225ENST00000512147 BTBD19C9JJ37 291 aa8.52□□□□□ -1.05
CLDND1-225ENST00000512147 USP2O75604 605 aaPredicted RBP8.52□□□□□ -1.05
CLDND1-225ENST00000512147 SSTR3P32745 418 aaPredicted RBP8.52□□□□□ -1.05
CLDND1-225ENST00000512147 CDCA8Q53HL2 280 aa8.52□□□□□ -1.05
CLDND1-225ENST00000512147 BADQ92934 168 aa8.52□□□□□ -1.05
CLDND1-225ENST00000512147 GMLQ99445 158 aa8.52□□□□□ -1.05
CLDND1-225ENST00000512147 ZC3H12CQ9C0D7 883 aaKnown RBP8.52□□□□□ -1.05
CLDND1-225ENST00000512147 FAM86C1Q9NVL1 165 aa8.52□□□□□ -1.05
CLDND1-225ENST00000512147 TRPC6Q9Y210 931 aa8.52□□□□□ -1.05
CLDND1-225ENST00000512147 HEG1Q9ULI3 1381 aa8.51□□□□□ -1.05
CLDND1-225ENST00000512147 NAV2Q8IVL1 2488 aa8.51□□□□□ -1.05
CLDND1-225ENST00000512147 DCXO43602 365 aa8.51□□□□□ -1.05
CLDND1-225ENST00000512147 HOXB3P14651 431 aaPredicted RBP8.51□□□□□ -1.05
CLDND1-225ENST00000512147 C3orf67Q6ZVT6 689 aa8.51□□□□□ -1.05
CLDND1-225ENST00000512147 TMC4Q7Z404 712 aa8.51□□□□□ -1.05
CLDND1-225ENST00000512147 ATOH1Q92858 354 aaPredicted RBP8.51□□□□□ -1.05
CLDND1-225ENST00000512147 POLR3GLQ9BT43 218 aa8.51□□□□□ -1.05
CLDND1-225ENST00000512147 ZNF316A6NFI3 1004 aaPredicted RBP8.5□□□□□ -1.05
CLDND1-225ENST00000512147 LRRC37A2A6NM11 1700 aa8.5□□□□□ -1.05
CLDND1-225ENST00000512147 RNMTO43148 476 aaKnown RBP8.5□□□□□ -1.05
CLDND1-225ENST00000512147 SASH1O94885 1247 aa8.5□□□□□ -1.05
CLDND1-225ENST00000512147 PIP4K2AP48426 406 aaPredicted RBP8.5□□□□□ -1.05
CLDND1-225ENST00000512147 TCF15Q12870 199 aa8.5□□□□□ -1.05
CLDND1-225ENST00000512147 EIF4A2Q14240 407 aaKnown RBP8.5□□□□□ -1.05
CLDND1-225ENST00000512147 HLFQ16534 295 aa8.5□□□□□ -1.05
CLDND1-225ENST00000512147 CCDC129Q6ZRS4 1044 aa8.5□□□□□ -1.05
CLDND1-225ENST00000512147 KCNH4Q9UQ05 1017 aa8.5□□□□□ -1.05
CLDND1-225ENST00000512147 PPP2R3BQ9Y5P8 575 aa8.5□□□□□ -1.05
CLDND1-225ENST00000512147 SOWAHBA6NEL2 793 aa8.49□□□□□ -1.05
CLDND1-225ENST00000512147 IER5LQ5T953 404 aa8.49□□□□□ -1.05
CLDND1-225ENST00000512147 DDX46Q7L014 1031 aaKnown RBP8.49□□□□□ -1.05
CLDND1-225ENST00000512147 HLA-CQ95604 372 aa8.49□□□□□ -1.05
CLDND1-225ENST00000512147 PRDM5Q9NQX1 630 aaPredicted RBP8.49□□□□□ -1.05
CLDND1-225ENST00000512147 POLLQ9UGP5 575 aa8.49□□□□□ -1.05
CLDND1-225ENST00000512147 COL1A1P02452 1464 aaPredicted RBP8.49□□□□□ -1.05
CLDND1-225ENST00000512147 CACNA1HO95180 2353 aa8.49□□□□□ -1.05
CLDND1-225ENST00000512147 TNPO2O14787 897 aaKnown RBP8.48□□□□□ -1.05
CLDND1-225ENST00000512147 HMGCRP04035 888 aa8.48□□□□□ -1.05
CLDND1-225ENST00000512147 SNAPC2Q13487 334 aa8.48□□□□□ -1.05
CLDND1-225ENST00000512147 ASCL5Q7RTU5 278 aa8.48□□□□□ -1.05
CLDND1-225ENST00000512147 SENP6Q9GZR1 1112 aaPredicted RBP8.48□□□□□ -1.05
CLDND1-225ENST00000512147 DDX60Q8IY21 1712 aaKnown RBP8.48□□□□□ -1.05
CLDND1-225ENST00000512147 DUOX1Q9NRD9 1551 aa8.48□□□□□ -1.05
CLDND1-225ENST00000512147 DCHS1Q96JQ0 3298 aa8.47□□□□□ -1.05
CLDND1-225ENST00000512147 POTEB3A0JP26 581 aa8.47□□□□□ -1.05
CLDND1-225ENST00000512147 USP17L3A6NCW0 530 aa8.47□□□□□ -1.05
CLDND1-225ENST00000512147 USP17L4A6NCW7 530 aa8.47□□□□□ -1.05
CLDND1-225ENST00000512147 PROB1E7EW31 1015 aa8.47□□□□□ -1.05
CLDND1-225ENST00000512147 MMP14P50281 582 aa8.47□□□□□ -1.05
CLDND1-225ENST00000512147 GRAPQ13588 217 aa8.47□□□□□ -1.05
CLDND1-225ENST00000512147 PKN1Q16512 942 aa8.47□□□□□ -1.05
CLDND1-225ENST00000512147 NBPF12Q5TAG4 269 aaPredicted RBP8.47□□□□□ -1.05
CLDND1-225ENST00000512147 SUSD4Q5VX71 490 aa8.47□□□□□ -1.05
CLDND1-225ENST00000512147 POTEBQ6S5H4 581 aa8.47□□□□□ -1.05
CLDND1-225ENST00000512147 USP17L1Q7RTZ2 530 aa8.47□□□□□ -1.05
CLDND1-225ENST00000512147 FAM178BQ8IXR5 827 aa8.47□□□□□ -1.05
CLDND1-225ENST00000512147 GRAPLQ8TC17 118 aaPredicted RBP8.47□□□□□ -1.05
CLDND1-225ENST00000512147 FMNL2Q96PY5 1086 aa8.47□□□□□ -1.05
CLDND1-225ENST00000512147 GVINP1Q7Z2Y8 2422 aa8.46□□□□□ -1.05
CLDND1-225ENST00000512147 USP24Q9UPU5 2620 aa8.46□□□□□ -1.05
CLDND1-225ENST00000512147 PDHXO00330 501 aa8.46□□□□□ -1.06
CLDND1-225ENST00000512147 ATN1P54259 1190 aaPredicted RBP8.46□□□□□ -1.06
CLDND1-225ENST00000512147 ZNF790Q6PG37 636 aa8.46□□□□□ -1.06
CLDND1-225ENST00000512147 COA7Q96BR5 231 aa8.46□□□□□ -1.06
CLDND1-225ENST00000512147 PBX4Q9BYU1 374 aa8.46□□□□□ -1.06
CLDND1-225ENST00000512147 CSADQ9Y600 493 aa8.46□□□□□ -1.06
CLDND1-225ENST00000512147 SCN9AQ15858 1988 aa8.46□□□□□ -1.06
CLDND1-225ENST00000512147 IBTKQ9P2D0 1353 aaPredicted RBP8.46□□□□□ -1.06
CLDND1-225ENST00000512147 LTBP2Q14767 1821 aa8.45□□□□□ -1.06
CLDND1-225ENST00000512147 PRR23AA6NEV1 266 aa8.45□□□□□ -1.06
CLDND1-225ENST00000512147 SOBPA7XYQ1 873 aa8.45□□□□□ -1.06
CLDND1-225ENST00000512147 GPTP24298 496 aa8.45□□□□□ -1.06
CLDND1-225ENST00000512147 PBX2P40425 430 aa8.45□□□□□ -1.06
CLDND1-225ENST00000512147 RTP1P59025 263 aa8.45□□□□□ -1.06
CLDND1-225ENST00000512147 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.45□□□□□ -1.06
CLDND1-225ENST00000512147 PPP1R42Q7Z4L9 355 aa8.45□□□□□ -1.06
CLDND1-225ENST00000512147 RMDN1Q96DB5 314 aa8.45□□□□□ -1.06
CLDND1-225ENST00000512147 CHAMP1Q96JM3 812 aa8.45□□□□□ -1.06
CLDND1-225ENST00000512147 CARD14Q9BXL6 1004 aa8.45□□□□□ -1.06
CLDND1-225ENST00000512147 PANK3Q9H999 370 aa8.45□□□□□ -1.06
CLDND1-225ENST00000512147 SLC28A3Q9HAS3 691 aa8.45□□□□□ -1.06
CLDND1-225ENST00000512147 MSRAQ9UJ68 235 aa8.45□□□□□ -1.06
CLDND1-225ENST00000512147 ATP11BQ9Y2G3 1177 aa8.45□□□□□ -1.06
CLDND1-225ENST00000512147 UBR2Q8IWV8 1755 aa8.44□□□□□ -1.06
CLDND1-225ENST00000512147 GTPBP6O43824 516 aaPredicted RBP8.44□□□□□ -1.06
CLDND1-225ENST00000512147 BCRP11274 1271 aa8.44□□□□□ -1.06
CLDND1-225ENST00000512147 MAP3K9P80192 1104 aa8.44□□□□□ -1.06
CLDND1-225ENST00000512147 GPSM2P81274 684 aa8.44□□□□□ -1.06
CLDND1-225ENST00000512147 DDX10Q13206 875 aaKnown RBP8.44□□□□□ -1.06
CLDND1-225ENST00000512147 VGLL4Q14135 290 aa8.44□□□□□ -1.06
CLDND1-225ENST00000512147 PUM1Q14671 1186 aaKnown RBP eCLIP8.44□□□□□ -1.06
CLDND1-225ENST00000512147 SLC10A5Q5PT55 438 aa8.44□□□□□ -1.06
CLDND1-225ENST00000512147 ANKRD23Q86SG2 305 aa8.44□□□□□ -1.06
CLDND1-225ENST00000512147 LURAP1LQ8IV03 231 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms