RNA–Protein interactions for RNA: ENST00000511891.5

COPS4-211, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-211ENST00000511891 PRMT6Q96LA8 375 aaPredicted RBP12.39□□□□□ -0.43
COPS4-211ENST00000511891 MEIS3Q99687 375 aa12.39□□□□□ -0.43
COPS4-211ENST00000511891 SIL1Q9H173 461 aa12.39□□□□□ -0.43
COPS4-211ENST00000511891 PAPPA2Q9BXP8 1791 aa12.38□□□□□ -0.43
COPS4-211ENST00000511891 EYA2O00167 538 aa12.38□□□□□ -0.43
COPS4-211ENST00000511891 FKBP1BP68106 108 aa12.38□□□□□ -0.43
COPS4-211ENST00000511891 ATG9AQ7Z3C6 839 aa12.38□□□□□ -0.43
COPS4-211ENST00000511891 RASAL3Q86YV0 1011 aa12.38□□□□□ -0.43
COPS4-211ENST00000511891 APOBEC3FQ8IUX4 373 aaKnown RBP12.38□□□□□ -0.43
COPS4-211ENST00000511891 MTMR14Q8NCE2 650 aa12.38□□□□□ -0.43
COPS4-211ENST00000511891 FZD1Q9UP38 647 aa12.38□□□□□ -0.43
COPS4-211ENST00000511891 KIF16BQ96L93 1317 aa12.37□□□□□ -0.43
COPS4-211ENST00000511891 FGFR2P21802 821 aa12.37□□□□□ -0.43
COPS4-211ENST00000511891 PUM3Q15397 648 aaKnown RBP12.37□□□□□ -0.43
COPS4-211ENST00000511891 CAVIN4Q5BKX8 364 aa12.37□□□□□ -0.43
COPS4-211ENST00000511891 ASTLQ6HA08 431 aaPredicted RBP12.37□□□□□ -0.43
COPS4-211ENST00000511891 FRAT1Q92837 279 aaPredicted RBP12.37□□□□□ -0.43
COPS4-211ENST00000511891 MS4A3Q96HJ5 214 aa12.37□□□□□ -0.43
COPS4-211ENST00000511891 DEFB129Q9H1M3 183 aa12.37□□□□□ -0.43
COPS4-211ENST00000511891 VEZTQ9HBM0 779 aa12.37□□□□□ -0.43
COPS4-211ENST00000511891 TTF2Q9UNY4 1162 aaKnown RBP12.37□□□□□ -0.43
COPS4-211ENST00000511891 PA2G4Q9UQ80 394 aaKnown RBP12.37□□□□□ -0.43
COPS4-211ENST00000511891 ATMINO43313 823 aaPredicted RBP12.36□□□□□ -0.43
COPS4-211ENST00000511891 FRAT2O75474 233 aaPredicted RBP12.36□□□□□ -0.43
COPS4-211ENST00000511891 IFIT1P09914 478 aaKnown RBP12.36□□□□□ -0.43
COPS4-211ENST00000511891 TRIM27P14373 513 aa12.36□□□□□ -0.43
COPS4-211ENST00000511891 NF2P35240 595 aa12.36□□□□□ -0.43
COPS4-211ENST00000511891 INTS3Q68E01 1043 aaKnown RBP12.36□□□□□ -0.43
COPS4-211ENST00000511891 SLC39A7Q92504 469 aa12.36□□□□□ -0.43
COPS4-211ENST00000511891 ARHGAP45Q92619 1136 aa12.36□□□□□ -0.43
COPS4-211ENST00000511891 CLUAP1Q96AJ1 413 aa12.36□□□□□ -0.43
COPS4-211ENST00000511891 CSRNP1Q96S65 589 aa12.36□□□□□ -0.43
COPS4-211ENST00000511891 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.36□□□□□ -0.43
COPS4-211ENST00000511891 CA12O43570 354 aa12.35□□□□□ -0.43
COPS4-211ENST00000511891 MYO1BO43795 1136 aa12.35□□□□□ -0.43
COPS4-211ENST00000511891 C7P10643 843 aa12.35□□□□□ -0.43
COPS4-211ENST00000511891 SLC5A1P13866 664 aa12.35□□□□□ -0.43
COPS4-211ENST00000511891 MKRN3Q13064 507 aaKnown RBP12.35□□□□□ -0.43
COPS4-211ENST00000511891 FAM163AQ96GL9 167 aaPredicted RBP12.35□□□□□ -0.43
COPS4-211ENST00000511891 TDRD3Q9H7E2 651 aaKnown RBP12.35□□□□□ -0.43
COPS4-211ENST00000511891 RNF186Q9NXI6 227 aa12.35□□□□□ -0.43
COPS4-211ENST00000511891 ZNF70Q9UC06 446 aaPredicted RBP12.35□□□□□ -0.43
COPS4-211ENST00000511891 ANGEL1Q9UNK9 670 aaKnown RBP12.35□□□□□ -0.43
COPS4-211ENST00000511891 IPO8O15397 1037 aaKnown RBP12.34□□□□□ -0.43
COPS4-211ENST00000511891 TRPA1O75762 1119 aa12.34□□□□□ -0.43
COPS4-211ENST00000511891 CIAO1O76071 339 aa12.34□□□□□ -0.43
COPS4-211ENST00000511891 CRKP46108 304 aa12.34□□□□□ -0.43
COPS4-211ENST00000511891 NBPF12Q5TAG4 269 aaPredicted RBP12.34□□□□□ -0.43
COPS4-211ENST00000511891 ATF7IPQ6VMQ6 1270 aa12.34□□□□□ -0.43
COPS4-211ENST00000511891 ARMC9Q7Z3E5 817 aa12.34□□□□□ -0.43
COPS4-211ENST00000511891 DZIP1LQ8IYY4 767 aaKnown RBP12.34□□□□□ -0.43
COPS4-211ENST00000511891 LPIN2Q92539 896 aa12.34□□□□□ -0.43
COPS4-211ENST00000511891 CEP126Q9P2H0 1117 aa12.34□□□□□ -0.43
COPS4-211ENST00000511891 SERPINA10Q9UK55 444 aa12.34□□□□□ -0.43
COPS4-211ENST00000511891 SSC5DA1L4H1 1573 aa12.34□□□□□ -0.43
COPS4-211ENST00000511891 GNAI3P08754 354 aa12.33□□□□□ -0.44
COPS4-211ENST00000511891 RASA3Q14644 834 aa12.33□□□□□ -0.44
COPS4-211ENST00000511891 ATP2B3Q16720 1220 aa12.33□□□□□ -0.44
COPS4-211ENST00000511891 LCE2DQ5TA82 110 aaPredicted RBP12.33□□□□□ -0.44
COPS4-211ENST00000511891 MAMSTRQ6ZN01 415 aa12.33□□□□□ -0.44
COPS4-211ENST00000511891 TBC1D22AQ8WUA7 517 aa12.33□□□□□ -0.44
COPS4-211ENST00000511891 HDAC5Q9UQL6 1122 aa12.33□□□□□ -0.44
COPS4-211ENST00000511891 ARAP2Q8WZ64 1704 aa12.33□□□□□ -0.44
COPS4-211ENST00000511891 COL1A1P02452 1464 aaPredicted RBP12.33□□□□□ -0.44
COPS4-211ENST00000511891 ECM29Q5VYK3 1845 aa12.32□□□□□ -0.44
COPS4-211ENST00000511891 TCP10L2B9ZVM9 353 aa12.32□□□□□ -0.44
COPS4-211ENST00000511891 ADORA1P30542 326 aa12.32□□□□□ -0.44
COPS4-211ENST00000511891 IL15P40933 162 aaPredicted RBP12.32□□□□□ -0.44
COPS4-211ENST00000511891 MNX1P50219 401 aaPredicted RBP12.32□□□□□ -0.44
COPS4-211ENST00000511891 LDLRAD1Q5T700 205 aa12.32□□□□□ -0.44
COPS4-211ENST00000511891 CDAN1Q8IWY9 1227 aa12.32□□□□□ -0.44
COPS4-211ENST00000511891 ABHD8Q96I13 439 aa12.32□□□□□ -0.44
COPS4-211ENST00000511891 COPRSQ9NQ92 184 aa12.32□□□□□ -0.44
COPS4-211ENST00000511891 FBXO3Q9UK99 471 aa12.32□□□□□ -0.44
COPS4-211ENST00000511891 PPP2R3BQ9Y5P8 575 aa12.32□□□□□ -0.44
COPS4-211ENST00000511891 CASP8AP2Q9UKL3 1982 aa12.32□□□□□ -0.44
COPS4-211ENST00000511891 SRGAP3O43295 1099 aa12.31□□□□□ -0.44
COPS4-211ENST00000511891 PHKA1P46020 1223 aa12.31□□□□□ -0.44
COPS4-211ENST00000511891 CACNB3P54284 484 aa12.31□□□□□ -0.44
COPS4-211ENST00000511891 ZKSCAN2Q63HK3 967 aa12.31□□□□□ -0.44
COPS4-211ENST00000511891 TMEM57Q8N5G2 664 aa12.31□□□□□ -0.44
COPS4-211ENST00000511891 CLMNQ96JQ2 1002 aa12.31□□□□□ -0.44
COPS4-211ENST00000511891 TMEM39BQ9GZU3 492 aa12.31□□□□□ -0.44
COPS4-211ENST00000511891 SAGE1Q9NXZ1 904 aa12.31□□□□□ -0.44
COPS4-211ENST00000511891 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.31□□□□□ -0.44
COPS4-211ENST00000511891 USP2O75604 605 aaPredicted RBP12.3□□□□□ -0.44
COPS4-211ENST00000511891 HDLBPQ00341 1268 aaKnown RBP12.3□□□□□ -0.44
COPS4-211ENST00000511891 MAP3K11Q16584 847 aa12.3□□□□□ -0.44
COPS4-211ENST00000511891 SUPT20HL1Q3ZLR7 823 aa12.3□□□□□ -0.44
COPS4-211ENST00000511891 SPRYD7Q5W111 196 aa12.3□□□□□ -0.44
COPS4-211ENST00000511891 TEKT1Q969V4 418 aa12.3□□□□□ -0.44
COPS4-211ENST00000511891 PNMA6EA0A0J9YXQ4 647 aa12.29□□□□□ -0.44
COPS4-211ENST00000511891 PPP1R12BO60237 982 aaPredicted RBP12.29□□□□□ -0.44
COPS4-211ENST00000511891 GNAI2P04899 355 aa12.29□□□□□ -0.44
COPS4-211ENST00000511891 TIMM10P62072 90 aa12.29□□□□□ -0.44
COPS4-211ENST00000511891 TFCP2Q12800 502 aa12.29□□□□□ -0.44
COPS4-211ENST00000511891 MTX1Q13505 466 aa12.29□□□□□ -0.44
COPS4-211ENST00000511891 TNFAIP1Q13829 316 aa12.29□□□□□ -0.44
COPS4-211ENST00000511891 APOBEC3HQ6NTF7 200 aaKnown RBP12.29□□□□□ -0.44
COPS4-211ENST00000511891 WDR66Q8TBY9 1149 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms