RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 A0A1B0GUL6 1792 aa10.99□□□□□ -0.65
NR1I3-228ENST00000511676 SPDYE2BA6NHP3 402 aa10.99□□□□□ -0.65
NR1I3-228ENST00000511676 SEMA3EO15041 775 aa10.99□□□□□ -0.65
NR1I3-228ENST00000511676 SGSM2O43147 1006 aa10.99□□□□□ -0.65
NR1I3-228ENST00000511676 CELF2O95319 508 aaKnown RBP10.99□□□□□ -0.65
NR1I3-228ENST00000511676 SEC24BO95487 1268 aa10.99□□□□□ -0.65
NR1I3-228ENST00000511676 SPDYE6P0CI01 402 aa10.99□□□□□ -0.65
NR1I3-228ENST00000511676 EPS15P42566 896 aa10.99□□□□□ -0.65
NR1I3-228ENST00000511676 MFAP1P55081 439 aaKnown RBP10.99□□□□□ -0.65
NR1I3-228ENST00000511676 TIMM10P62072 90 aa10.99□□□□□ -0.65
NR1I3-228ENST00000511676 CHRNDQ07001 517 aa10.99□□□□□ -0.65
NR1I3-228ENST00000511676 SPDYE2Q495Y8 402 aa10.99□□□□□ -0.65
NR1I3-228ENST00000511676 TTC39AQ5SRH9 613 aa10.99□□□□□ -0.65
NR1I3-228ENST00000511676 C15orf52Q6ZUT6 534 aaKnown RBP10.99□□□□□ -0.65
NR1I3-228ENST00000511676 C3orf67Q6ZVT6 689 aa10.99□□□□□ -0.65
NR1I3-228ENST00000511676 SAPCD2Q86UD0 394 aa10.99□□□□□ -0.65
NR1I3-228ENST00000511676 CNOT7Q9UIV1 285 aaKnown RBP10.99□□□□□ -0.65
NR1I3-228ENST00000511676 MINPP1Q9UNW1 487 aa10.99□□□□□ -0.65
NR1I3-228ENST00000511676 DUOX1Q9NRD9 1551 aa10.99□□□□□ -0.65
NR1I3-228ENST00000511676 LRRC37AA6NMS7 1700 aa10.98□□□□□ -0.65
NR1I3-228ENST00000511676 AK9Q5TCS8 1911 aa10.98□□□□□ -0.65
NR1I3-228ENST00000511676 HSPA8P11142 646 aaKnown RBP10.98□□□□□ -0.65
NR1I3-228ENST00000511676 MCCP23508 829 aa10.98□□□□□ -0.65
NR1I3-228ENST00000511676 ANAPC15P60006 121 aa10.98□□□□□ -0.65
NR1I3-228ENST00000511676 CXCL9Q07325 125 aa10.98□□□□□ -0.65
NR1I3-228ENST00000511676 AOC3Q16853 763 aa10.98□□□□□ -0.65
NR1I3-228ENST00000511676 ZSCAN25Q6NSZ9 544 aa10.98□□□□□ -0.65
NR1I3-228ENST00000511676 ABHD8Q96I13 439 aa10.98□□□□□ -0.65
NR1I3-228ENST00000511676 BOLA2Q9H3K6 86 aa10.98□□□□□ -0.65
NR1I3-228ENST00000511676 PAG1Q9NWQ8 432 aa10.98□□□□□ -0.65
NR1I3-228ENST00000511676 SAGE1Q9NXZ1 904 aa10.98□□□□□ -0.65
NR1I3-228ENST00000511676 PCDH10Q9P2E7 1040 aa10.98□□□□□ -0.65
NR1I3-228ENST00000511676 LEMD3Q9Y2U8 911 aa10.98□□□□□ -0.65
NR1I3-228ENST00000511676 C6orf229H3BNL8 230 aa10.97□□□□□ -0.65
NR1I3-228ENST00000511676 FKBP1BP68106 108 aa10.97□□□□□ -0.65
NR1I3-228ENST00000511676 CCDC102BQ68D86 513 aa10.97□□□□□ -0.65
NR1I3-228ENST00000511676 SULF1Q8IWU6 871 aa10.97□□□□□ -0.65
NR1I3-228ENST00000511676 CELF1Q92879 486 aaKnown RBP10.97□□□□□ -0.65
NR1I3-228ENST00000511676 FSD1Q9BTV5 496 aa10.97□□□□□ -0.65
NR1I3-228ENST00000511676 USP26Q9BXU7 913 aa10.97□□□□□ -0.65
NR1I3-228ENST00000511676 GNL3LQ9NVN8 582 aaKnown RBP10.97□□□□□ -0.65
NR1I3-228ENST00000511676 PODXL2Q9NZ53 605 aa10.97□□□□□ -0.65
NR1I3-228ENST00000511676 NSFL1CQ9UNZ2 370 aaKnown RBP10.97□□□□□ -0.65
NR1I3-228ENST00000511676 SSUH2Q9Y2M2 353 aa10.97□□□□□ -0.65
NR1I3-228ENST00000511676 XDHP47989 1333 aa10.97□□□□□ -0.65
NR1I3-228ENST00000511676 MED23Q9ULK4 1368 aa10.97□□□□□ -0.65
NR1I3-228ENST00000511676 COL11A2P13942 1736 aaPredicted RBP10.96□□□□□ -0.65
NR1I3-228ENST00000511676 CCDC85CA6NKD9 419 aa10.96□□□□□ -0.65
NR1I3-228ENST00000511676 NF2P35240 595 aa10.96□□□□□ -0.65
NR1I3-228ENST00000511676 GMPSP49915 693 aaPredicted RBP10.96□□□□□ -0.65
NR1I3-228ENST00000511676 GRM1Q13255 1194 aa10.96□□□□□ -0.65
NR1I3-228ENST00000511676 PKN2Q16513 984 aaKnown RBP10.96□□□□□ -0.65
NR1I3-228ENST00000511676 CAVIN4Q5BKX8 364 aa10.96□□□□□ -0.65
NR1I3-228ENST00000511676 IPO9Q96P70 1041 aaKnown RBP10.96□□□□□ -0.65
NR1I3-228ENST00000511676 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.96□□□□□ -0.65
NR1I3-228ENST00000511676 HELLSQ9NRZ9 838 aa10.96□□□□□ -0.65
NR1I3-228ENST00000511676 ADORA1P30542 326 aa10.95□□□□□ -0.66
NR1I3-228ENST00000511676 RGS19P49795 217 aa10.95□□□□□ -0.66
NR1I3-228ENST00000511676 CYP4F22Q6NT55 531 aa10.95□□□□□ -0.66
NR1I3-228ENST00000511676 KIAA1211Q6ZU35 1233 aa10.95□□□□□ -0.66
NR1I3-228ENST00000511676 KRT26Q7Z3Y9 468 aa10.95□□□□□ -0.66
NR1I3-228ENST00000511676 OGFOD1Q8N543 542 aa10.95□□□□□ -0.66
NR1I3-228ENST00000511676 AGBL3Q8NEM8 1001 aa10.95□□□□□ -0.66
NR1I3-228ENST00000511676 BCL11AQ9H165 835 aa10.95□□□□□ -0.66
NR1I3-228ENST00000511676 ANKIB1Q9P2G1 1089 aa10.95□□□□□ -0.66
NR1I3-228ENST00000511676 COL4A1P02462 1669 aa10.95□□□□□ -0.66
NR1I3-228ENST00000511676 ATP2B4P23634 1241 aa10.94□□□□□ -0.66
NR1I3-228ENST00000511676 HUNKP57058 714 aa10.94□□□□□ -0.66
NR1I3-228ENST00000511676 BECN1Q14457 450 aa10.94□□□□□ -0.66
NR1I3-228ENST00000511676 CST9Q5W186 159 aa10.94□□□□□ -0.66
NR1I3-228ENST00000511676 RGMBQ6NW40 437 aa10.94□□□□□ -0.66
NR1I3-228ENST00000511676 OLFM4Q6UX06 510 aa10.94□□□□□ -0.66
NR1I3-228ENST00000511676 PODNQ7Z5L7 613 aa10.94□□□□□ -0.66
NR1I3-228ENST00000511676 DNAJC2Q99543 621 aaKnown RBP10.94□□□□□ -0.66
NR1I3-228ENST00000511676 DENND2AQ9ULE3 1009 aa10.94□□□□□ -0.66
NR1I3-228ENST00000511676 CACNA1SQ13698 1873 aa10.93□□□□□ -0.66
NR1I3-228ENST00000511676 LTBP1Q14766 1721 aa10.93□□□□□ -0.66
NR1I3-228ENST00000511676 MYO3BQ8WXR4 1341 aa10.93□□□□□ -0.66
NR1I3-228ENST00000511676 IRS2Q9Y4H2 1338 aa10.93□□□□□ -0.66
NR1I3-228ENST00000511676 GOLIM4O00461 696 aa10.93□□□□□ -0.66
NR1I3-228ENST00000511676 RNF113AO15541 343 aaKnown RBP10.93□□□□□ -0.66
NR1I3-228ENST00000511676 RAD17O75943 681 aa10.93□□□□□ -0.66
NR1I3-228ENST00000511676 MCAMP43121 646 aa10.93□□□□□ -0.66
NR1I3-228ENST00000511676 PHKA1P46020 1223 aa10.93□□□□□ -0.66
NR1I3-228ENST00000511676 KCNJ4P48050 445 aa10.93□□□□□ -0.66
NR1I3-228ENST00000511676 RABEP1Q15276 862 aa10.93□□□□□ -0.66
NR1I3-228ENST00000511676 UBE3CQ15386 1083 aa10.93□□□□□ -0.66
NR1I3-228ENST00000511676 MCMDC2Q4G0Z9 681 aa10.93□□□□□ -0.66
NR1I3-228ENST00000511676 ZMYM1Q5SVZ6 1142 aa10.93□□□□□ -0.66
NR1I3-228ENST00000511676 FBXO33Q7Z6M2 555 aa10.93□□□□□ -0.66
NR1I3-228ENST00000511676 MICALL2Q8IY33 904 aa10.93□□□□□ -0.66
NR1I3-228ENST00000511676 SPATA5Q8NB90 893 aa10.93□□□□□ -0.66
NR1I3-228ENST00000511676 HELBQ8NG08 1087 aaPredicted RBP10.93□□□□□ -0.66
NR1I3-228ENST00000511676 KCNB2Q92953 911 aa10.93□□□□□ -0.66
NR1I3-228ENST00000511676 SNX21Q969T3 373 aa10.93□□□□□ -0.66
NR1I3-228ENST00000511676 ZNF408Q9H9D4 720 aa10.93□□□□□ -0.66
NR1I3-228ENST00000511676 GBA2Q9HCG7 927 aaPredicted RBP10.93□□□□□ -0.66
NR1I3-228ENST00000511676 ANO2Q9NQ90 1003 aa10.93□□□□□ -0.66
NR1I3-228ENST00000511676 GGA1Q9UJY5 639 aa10.93□□□□□ -0.66
NR1I3-228ENST00000511676 CCDC171Q6TFL3 1326 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms