RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 CCDC102AQ96A19 550 aa10.82□□□□□ -0.68
PDLIM5-213ENST00000509357 VEZTQ9HBM0 779 aa10.82□□□□□ -0.68
PDLIM5-213ENST00000509357 GNL3LQ9NVN8 582 aaKnown RBP10.82□□□□□ -0.68
PDLIM5-213ENST00000509357 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.82□□□□□ -0.68
PDLIM5-213ENST00000509357 FBXO3Q9UK99 471 aa10.82□□□□□ -0.68
PDLIM5-213ENST00000509357 FKBP1BP68106 108 aa10.81□□□□□ -0.68
PDLIM5-213ENST00000509357 NOGQ13253 232 aa10.81□□□□□ -0.68
PDLIM5-213ENST00000509357 PRKG1Q13976 671 aa10.81□□□□□ -0.68
PDLIM5-213ENST00000509357 TLR7Q9NYK1 1049 aaKnown RBP10.81□□□□□ -0.68
PDLIM5-213ENST00000509357 SPDYE2BA6NHP3 402 aa10.8□□□□□ -0.68
PDLIM5-213ENST00000509357 UBE2Q2LH0YL09 131 aa10.8□□□□□ -0.68
PDLIM5-213ENST00000509357 IGHDP01880 384 aa10.8□□□□□ -0.68
PDLIM5-213ENST00000509357 SPDYE6P0CI01 402 aa10.8□□□□□ -0.68
PDLIM5-213ENST00000509357 LBX1P52954 281 aa10.8□□□□□ -0.68
PDLIM5-213ENST00000509357 GRIK5Q16478 980 aa10.8□□□□□ -0.68
PDLIM5-213ENST00000509357 IFFO2Q5TF58 517 aa10.8□□□□□ -0.68
PDLIM5-213ENST00000509357 MOB2Q70IA6 237 aa10.8□□□□□ -0.68
PDLIM5-213ENST00000509357 ARMC9Q7Z3E5 817 aa10.8□□□□□ -0.68
PDLIM5-213ENST00000509357 MTMR14Q8NCE2 650 aa10.8□□□□□ -0.68
PDLIM5-213ENST00000509357 PRMT6Q96LA8 375 aaPredicted RBP10.8□□□□□ -0.68
PDLIM5-213ENST00000509357 DEFB129Q9H1M3 183 aa10.8□□□□□ -0.68
PDLIM5-213ENST00000509357 SERPINA10Q9UK55 444 aa10.8□□□□□ -0.68
PDLIM5-213ENST00000509357 PCDHAC2Q9Y5I4 1007 aa10.8□□□□□ -0.68
PDLIM5-213ENST00000509357 TRPM7Q96QT4 1865 aa10.79□□□□□ -0.68
PDLIM5-213ENST00000509357 SURF6O75683 361 aaKnown RBP10.79□□□□□ -0.68
PDLIM5-213ENST00000509357 CRKP46108 304 aa10.79□□□□□ -0.68
PDLIM5-213ENST00000509357 TIMM10P62072 90 aa10.79□□□□□ -0.68
PDLIM5-213ENST00000509357 G3BP1Q13283 466 aaKnown RBP eCLIP10.79□□□□□ -0.68
PDLIM5-213ENST00000509357 SUPT20HL1Q3ZLR7 823 aa10.79□□□□□ -0.68
PDLIM5-213ENST00000509357 GORABQ5T7V8 394 aa10.79□□□□□ -0.68
PDLIM5-213ENST00000509357 RPAP2Q8IXW5 612 aaPredicted RBP10.79□□□□□ -0.68
PDLIM5-213ENST00000509357 ZBED3Q96IU2 234 aaPredicted RBP10.79□□□□□ -0.68
PDLIM5-213ENST00000509357 NEUROD6Q96NK8 337 aa10.79□□□□□ -0.68
PDLIM5-213ENST00000509357 AKAP2Q9Y2D5 859 aa10.79□□□□□ -0.68
PDLIM5-213ENST00000509357 CA12O43570 354 aa10.78□□□□□ -0.68
PDLIM5-213ENST00000509357 SMARCA5O60264 1052 aaPredicted RBP10.78□□□□□ -0.68
PDLIM5-213ENST00000509357 PHKA1P46020 1223 aa10.78□□□□□ -0.68
PDLIM5-213ENST00000509357 KIF23Q02241 960 aaPredicted RBP10.78□□□□□ -0.68
PDLIM5-213ENST00000509357 OS9Q13438 667 aaPredicted RBP10.78□□□□□ -0.68
PDLIM5-213ENST00000509357 TNFAIP1Q13829 316 aa10.78□□□□□ -0.68
PDLIM5-213ENST00000509357 WDR66Q8TBY9 1149 aa10.78□□□□□ -0.68
PDLIM5-213ENST00000509357 TEKT1Q969V4 418 aa10.78□□□□□ -0.68
PDLIM5-213ENST00000509357 EAF2Q96CJ1 260 aaPredicted RBP10.78□□□□□ -0.68
PDLIM5-213ENST00000509357 TDRD3Q9H7E2 651 aaKnown RBP10.78□□□□□ -0.68
PDLIM5-213ENST00000509357 PRDM10Q9NQV6 1147 aa10.78□□□□□ -0.68
PDLIM5-213ENST00000509357 TMOD2Q9NZR1 351 aa10.78□□□□□ -0.68
PDLIM5-213ENST00000509357 ZNF70Q9UC06 446 aaPredicted RBP10.78□□□□□ -0.68
PDLIM5-213ENST00000509357 TSKSQ9UJT2 592 aa10.78□□□□□ -0.68
PDLIM5-213ENST00000509357 ANGEL1Q9UNK9 670 aaKnown RBP10.78□□□□□ -0.68
PDLIM5-213ENST00000509357 MAST3O60307 1309 aa10.78□□□□□ -0.68
PDLIM5-213ENST00000509357 DOCK2Q92608 1830 aa10.77□□□□□ -0.68
PDLIM5-213ENST00000509357 A0A1B0GUL7 405 aa10.77□□□□□ -0.69
PDLIM5-213ENST00000509357 TCP10L2B9ZVM9 353 aa10.77□□□□□ -0.69
PDLIM5-213ENST00000509357 PPP1R12BO60237 982 aaPredicted RBP10.77□□□□□ -0.69
PDLIM5-213ENST00000509357 CAPN15O75808 1086 aa10.77□□□□□ -0.69
PDLIM5-213ENST00000509357 SLC10A3P09131 477 aa10.77□□□□□ -0.69
PDLIM5-213ENST00000509357 HSPA8P11142 646 aaKnown RBP10.77□□□□□ -0.69
PDLIM5-213ENST00000509357 TNNI2P48788 182 aa10.77□□□□□ -0.69
PDLIM5-213ENST00000509357 MKRN3Q13064 507 aaKnown RBP10.77□□□□□ -0.69
PDLIM5-213ENST00000509357 RASA3Q14644 834 aa10.77□□□□□ -0.69
PDLIM5-213ENST00000509357 TNNI3KQ59H18 835 aa10.77□□□□□ -0.69
PDLIM5-213ENST00000509357 ZIC5Q96T25 663 aa10.77□□□□□ -0.69
PDLIM5-213ENST00000509357 DCTPP1Q9H773 170 aa10.77□□□□□ -0.69
PDLIM5-213ENST00000509357 IL1RAPL2Q9NP60 686 aa10.77□□□□□ -0.69
PDLIM5-213ENST00000509357 DBNLQ9UJU6 430 aaKnown RBP10.77□□□□□ -0.69
PDLIM5-213ENST00000509357 DENND2AQ9ULE3 1009 aa10.77□□□□□ -0.69
PDLIM5-213ENST00000509357 PPP2R3BQ9Y5P8 575 aa10.77□□□□□ -0.69
PDLIM5-213ENST00000509357 FPGT-TNNI3KV9GXZ4 949 aa10.77□□□□□ -0.69
PDLIM5-213ENST00000509357 AOX1Q06278 1338 aa10.77□□□□□ -0.69
PDLIM5-213ENST00000509357 POLR2AP24928 1970 aaKnown RBP10.76□□□□□ -0.69
PDLIM5-213ENST00000509357 FAM155AB1AL88 458 aaPredicted RBP10.76□□□□□ -0.69
PDLIM5-213ENST00000509357 APBB1O00213 710 aa10.76□□□□□ -0.69
PDLIM5-213ENST00000509357 LDHBP07195 334 aaKnown RBP10.76□□□□□ -0.69
PDLIM5-213ENST00000509357 HDLBPQ00341 1268 aaKnown RBP10.76□□□□□ -0.69
PDLIM5-213ENST00000509357 SPDYE2Q495Y8 402 aa10.76□□□□□ -0.69
PDLIM5-213ENST00000509357 CCDC102BQ68D86 513 aa10.76□□□□□ -0.69
PDLIM5-213ENST00000509357 PI16Q6UXB8 463 aa10.76□□□□□ -0.69
PDLIM5-213ENST00000509357 RHPN1Q8TCX5 695 aa10.76□□□□□ -0.69
PDLIM5-213ENST00000509357 OTUD7AQ8TE49 926 aaPredicted RBP10.76□□□□□ -0.69
PDLIM5-213ENST00000509357 SLC10A4Q96EP9 437 aa10.76□□□□□ -0.69
PDLIM5-213ENST00000509357 XAGE2Q96GT9 111 aa10.76□□□□□ -0.69
PDLIM5-213ENST00000509357 DBNDD2Q9BQY9 259 aa10.76□□□□□ -0.69
PDLIM5-213ENST00000509357 SUGT1Q9Y2Z0 365 aa10.76□□□□□ -0.69
PDLIM5-213ENST00000509357 SEMA3EO15041 775 aa10.75□□□□□ -0.69
PDLIM5-213ENST00000509357 HDAC1Q13547 482 aaPredicted RBP10.75□□□□□ -0.69
PDLIM5-213ENST00000509357 NBPF12Q5TAG4 269 aaPredicted RBP10.75□□□□□ -0.69
PDLIM5-213ENST00000509357 RASAL3Q86YV0 1011 aa10.75□□□□□ -0.69
PDLIM5-213ENST00000509357 REM2Q8IYK8 340 aaPredicted RBP10.75□□□□□ -0.69
PDLIM5-213ENST00000509357 ZGPATQ8N5A5 531 aaKnown RBP10.75□□□□□ -0.69
PDLIM5-213ENST00000509357 CCDC8Q9H0W5 538 aaPredicted RBP10.75□□□□□ -0.69
PDLIM5-213ENST00000509357 FZD1Q9UP38 647 aa10.75□□□□□ -0.69
PDLIM5-213ENST00000509357 ECM29Q5VYK3 1845 aa10.74□□□□□ -0.69
PDLIM5-213ENST00000509357 TRPA1O75762 1119 aa10.74□□□□□ -0.69
PDLIM5-213ENST00000509357 IREB2P48200 963 aaKnown RBP10.74□□□□□ -0.69
PDLIM5-213ENST00000509357 CACNB3P54284 484 aa10.74□□□□□ -0.69
PDLIM5-213ENST00000509357 HHIPL2Q6UWX4 724 aa10.74□□□□□ -0.69
PDLIM5-213ENST00000509357 DZIP1Q86YF9 867 aaKnown RBP10.74□□□□□ -0.69
PDLIM5-213ENST00000509357 ZDHHC15Q96MV8 337 aa10.74□□□□□ -0.69
PDLIM5-213ENST00000509357 CSRNP1Q96S65 589 aa10.74□□□□□ -0.69
PDLIM5-213ENST00000509357 MRIQ9BWK5 157 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms