RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 RPAP2Q8IXW5 612 aaPredicted RBP19.25■□□□□ 0.67
COL1A1-211ENST00000507689 ADORA1P30542 326 aa19.24■□□□□ 0.67
COL1A1-211ENST00000507689 PHKA1P46020 1223 aa19.24■□□□□ 0.67
COL1A1-211ENST00000507689 MAP2K1Q02750 393 aaPredicted RBP19.24■□□□□ 0.67
COL1A1-211ENST00000507689 CCDC158Q5M9N0 1113 aa19.24■□□□□ 0.67
COL1A1-211ENST00000507689 CYP4F22Q6NT55 531 aa19.24■□□□□ 0.67
COL1A1-211ENST00000507689 CEP85Q6P2H3 762 aa19.24■□□□□ 0.67
COL1A1-211ENST00000507689 SLF2Q8IX21 1173 aa19.24■□□□□ 0.67
COL1A1-211ENST00000507689 ZBED3Q96IU2 234 aaPredicted RBP19.24■□□□□ 0.67
COL1A1-211ENST00000507689 PRMT6Q96LA8 375 aaPredicted RBP19.24■□□□□ 0.67
COL1A1-211ENST00000507689 COL1A1P02452 1464 aaPredicted RBP19.23■□□□□ 0.67
COL1A1-211ENST00000507689 UQCRFS1P1P0C7P4 283 aa19.23■□□□□ 0.67
COL1A1-211ENST00000507689 SUPT20HL1Q3ZLR7 823 aa19.23■□□□□ 0.67
COL1A1-211ENST00000507689 DLK2Q6UY11 383 aa19.23■□□□□ 0.67
COL1A1-211ENST00000507689 ARMC9Q7Z3E5 817 aa19.23■□□□□ 0.67
COL1A1-211ENST00000507689 CCDC102AQ96A19 550 aa19.23■□□□□ 0.67
COL1A1-211ENST00000507689 MRIQ9BWK5 157 aa19.23■□□□□ 0.67
COL1A1-211ENST00000507689 DEFB129Q9H1M3 183 aa19.23■□□□□ 0.67
COL1A1-211ENST00000507689 GPR108Q9NPR9 543 aa19.23■□□□□ 0.67
COL1A1-211ENST00000507689 SCAF8Q9UPN6 1271 aaKnown RBP19.23■□□□□ 0.67
COL1A1-211ENST00000507689 ZNF646O15015 1829 aaPredicted RBP19.23■□□□□ 0.67
COL1A1-211ENST00000507689 ZNF157P51786 506 aaPredicted RBP19.22■□□□□ 0.67
COL1A1-211ENST00000507689 TTC39AQ5SRH9 613 aa19.22■□□□□ 0.67
COL1A1-211ENST00000507689 RGMBQ6NW40 437 aa19.22■□□□□ 0.67
COL1A1-211ENST00000507689 DZIP1Q86YF9 867 aaKnown RBP19.22■□□□□ 0.67
COL1A1-211ENST00000507689 NOP58Q9Y2X3 529 aaKnown RBP19.22■□□□□ 0.67
COL1A1-211ENST00000507689 CEP350Q5VT06 3117 aa19.21■□□□□ 0.67
COL1A1-211ENST00000507689 PPP1R12BO60237 982 aaPredicted RBP19.21■□□□□ 0.67
COL1A1-211ENST00000507689 HSPA1AP0DMV8 641 aaKnown RBP19.21■□□□□ 0.67
COL1A1-211ENST00000507689 HSPA1BP0DMV9 641 aaKnown RBP19.21■□□□□ 0.67
COL1A1-211ENST00000507689 MAP2K2P36507 400 aa19.21■□□□□ 0.67
COL1A1-211ENST00000507689 PRAMEF18Q5VWM3 479 aa19.21■□□□□ 0.67
COL1A1-211ENST00000507689 TDRD3Q9H7E2 651 aaKnown RBP19.21■□□□□ 0.67
COL1A1-211ENST00000507689 ZBTB40Q9NUA8 1239 aa19.21■□□□□ 0.67
COL1A1-211ENST00000507689 ZNF70Q9UC06 446 aaPredicted RBP19.21■□□□□ 0.67
COL1A1-211ENST00000507689 ABCF2Q9UG63 623 aa19.21■□□□□ 0.67
COL1A1-211ENST00000507689 PDS5AQ29RF7 1337 aaKnown RBP19.21■□□□□ 0.67
COL1A1-211ENST00000507689 SALL1Q9NSC2 1324 aa19.21■□□□□ 0.67
COL1A1-211ENST00000507689 POLR2AP24928 1970 aaKnown RBP19.21■□□□□ 0.67
COL1A1-211ENST00000507689 ARAP2Q8WZ64 1704 aa19.2■□□□□ 0.66
COL1A1-211ENST00000507689 NOGQ13253 232 aa19.2■□□□□ 0.66
COL1A1-211ENST00000507689 SPDYE2Q495Y8 402 aa19.2■□□□□ 0.66
COL1A1-211ENST00000507689 TNNI3KQ59H18 835 aa19.2■□□□□ 0.66
COL1A1-211ENST00000507689 HHIPL2Q6UWX4 724 aa19.2■□□□□ 0.66
COL1A1-211ENST00000507689 ZDHHC15Q96MV8 337 aa19.2■□□□□ 0.66
COL1A1-211ENST00000507689 FPGT-TNNI3KV9GXZ4 949 aa19.2■□□□□ 0.66
COL1A1-211ENST00000507689 MYH13Q9UKX3 1938 aa19.19■□□□□ 0.66
COL1A1-211ENST00000507689 RASGRF1Q13972 1273 aa19.19■□□□□ 0.66
COL1A1-211ENST00000507689 PCDHAC2Q9Y5I4 1007 aa19.19■□□□□ 0.66
COL1A1-211ENST00000507689 TCP10L2B9ZVM9 353 aa19.18■□□□□ 0.66
COL1A1-211ENST00000507689 ZBTB22O15209 634 aa19.18■□□□□ 0.66
COL1A1-211ENST00000507689 RASA3Q14644 834 aa19.18■□□□□ 0.66
COL1A1-211ENST00000507689 ERICH6Q7L0X2 663 aa19.18■□□□□ 0.66
COL1A1-211ENST00000507689 SPATA5Q8NB90 893 aa19.18■□□□□ 0.66
COL1A1-211ENST00000507689 HOOK2Q96ED9 719 aa19.18■□□□□ 0.66
COL1A1-211ENST00000507689 EXOC6BQ9Y2D4 811 aa19.18■□□□□ 0.66
COL1A1-211ENST00000507689 GSTO1P78417 241 aa19.17■□□□□ 0.66
COL1A1-211ENST00000507689 PRKG1Q13976 671 aa19.17■□□□□ 0.66
COL1A1-211ENST00000507689 GRIK5Q16478 980 aa19.17■□□□□ 0.66
COL1A1-211ENST00000507689 PAPPA2Q9BXP8 1791 aa19.16■□□□□ 0.66
COL1A1-211ENST00000507689 UBE2Q2LH0YL09 131 aa19.16■□□□□ 0.66
COL1A1-211ENST00000507689 LDHCP07864 332 aa19.16■□□□□ 0.66
COL1A1-211ENST00000507689 PRDX5P30044 214 aa19.16■□□□□ 0.66
COL1A1-211ENST00000507689 IREB2P48200 963 aaKnown RBP19.16■□□□□ 0.66
COL1A1-211ENST00000507689 C20orf194Q5TEA3 1177 aa19.16■□□□□ 0.66
COL1A1-211ENST00000507689 CLASRPQ8N2M8 674 aaKnown RBP19.16■□□□□ 0.66
COL1A1-211ENST00000507689 NOL10Q9BSC4 688 aaKnown RBP19.16■□□□□ 0.66
COL1A1-211ENST00000507689 LRP2BPQ9P2M1 347 aa19.16■□□□□ 0.66
COL1A1-211ENST00000507689 ANGEL1Q9UNK9 670 aaKnown RBP19.16■□□□□ 0.66
COL1A1-211ENST00000507689 APBB1O00213 710 aa19.15■□□□□ 0.66
COL1A1-211ENST00000507689 AOC2O75106 756 aa19.15■□□□□ 0.66
COL1A1-211ENST00000507689 RAB11FIP3O75154 756 aa19.15■□□□□ 0.66
COL1A1-211ENST00000507689 ARID4AP29374 1257 aaPredicted RBP19.15■□□□□ 0.66
COL1A1-211ENST00000507689 AACSQ86V21 672 aa19.15■□□□□ 0.66
COL1A1-211ENST00000507689 KIF1BPQ96EK5 621 aa19.15■□□□□ 0.66
COL1A1-211ENST00000507689 BCL11AQ9H165 835 aa19.15■□□□□ 0.66
COL1A1-211ENST00000507689 RAI14Q9P0K7 980 aa19.15■□□□□ 0.66
COL1A1-211ENST00000507689 ECM29Q5VYK3 1845 aa19.14■□□□□ 0.65
COL1A1-211ENST00000507689 CA12O43570 354 aa19.14■□□□□ 0.65
COL1A1-211ENST00000507689 IFIT2P09913 472 aaKnown RBP19.14■□□□□ 0.65
COL1A1-211ENST00000507689 CTCFP49711 727 aaPredicted RBP19.14■□□□□ 0.65
COL1A1-211ENST00000507689 RRP1P56182 461 aaKnown RBP19.14■□□□□ 0.65
COL1A1-211ENST00000507689 DIXDC1Q155Q3 683 aa19.14■□□□□ 0.65
COL1A1-211ENST00000507689 FKBP1CQ5VVH2 108 aa19.14■□□□□ 0.65
COL1A1-211ENST00000507689 REM2Q8IYK8 340 aaPredicted RBP19.14■□□□□ 0.65
COL1A1-211ENST00000507689 DBNDD2Q9BQY9 259 aa19.14■□□□□ 0.65
COL1A1-211ENST00000507689 CCDC8Q9H0W5 538 aaPredicted RBP19.14■□□□□ 0.65
COL1A1-211ENST00000507689 WBP1LQ9NX94 342 aa19.14■□□□□ 0.65
COL1A1-211ENST00000507689 HMG20BQ9P0W2 317 aa19.14■□□□□ 0.65
COL1A1-211ENST00000507689 APOBEC3HQ6NTF7 200 aaKnown RBP19.13■□□□□ 0.65
COL1A1-211ENST00000507689 FAM83AQ86UY5 434 aa19.13■□□□□ 0.65
COL1A1-211ENST00000507689 RHPN1Q8TCX5 695 aa19.13■□□□□ 0.65
COL1A1-211ENST00000507689 USP40Q9NVE5 1235 aa19.13■□□□□ 0.65
COL1A1-211ENST00000507689 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.13■□□□□ 0.65
COL1A1-211ENST00000507689 DAGLAQ9Y4D2 1042 aa19.13■□□□□ 0.65
COL1A1-211ENST00000507689 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.13■□□□□ 0.65
COL1A1-211ENST00000507689 UNCXA6NJT0 531 aa19.12■□□□□ 0.65
COL1A1-211ENST00000507689 SLC10A3P09131 477 aa19.12■□□□□ 0.65
COL1A1-211ENST00000507689 NBPF12Q5TAG4 269 aaPredicted RBP19.12■□□□□ 0.65
COL1A1-211ENST00000507689 MOB2Q70IA6 237 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms