RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 FAM84BQ96KN1 310 aaPredicted RBP16.25■□□□□ 0.19
TCOF1-209ENST00000506630 TNRC18O15417 2968 aaPredicted RBP16.24■□□□□ 0.19
TCOF1-209ENST00000506630 PAPPA2Q9BXP8 1791 aa16.24■□□□□ 0.19
TCOF1-209ENST00000506630 GPR25O00155 361 aa16.24■□□□□ 0.19
TCOF1-209ENST00000506630 FGFR2P21802 821 aa16.24■□□□□ 0.19
TCOF1-209ENST00000506630 TM4SF4P48230 202 aa16.24■□□□□ 0.19
TCOF1-209ENST00000506630 ATP8B2P98198 1209 aa16.24■□□□□ 0.19
TCOF1-209ENST00000506630 ATP2B3Q16720 1220 aa16.24■□□□□ 0.19
TCOF1-209ENST00000506630 NOM1Q5C9Z4 860 aaKnown RBP16.24■□□□□ 0.19
TCOF1-209ENST00000506630 C20orf194Q5TEA3 1177 aa16.24■□□□□ 0.19
TCOF1-209ENST00000506630 PRAMEF18Q5VWM3 479 aa16.24■□□□□ 0.19
TCOF1-209ENST00000506630 FBXO46Q6PJ61 603 aaPredicted RBP16.24■□□□□ 0.19
TCOF1-209ENST00000506630 LPIN2Q92539 896 aa16.24■□□□□ 0.19
TCOF1-209ENST00000506630 IQSEC3Q9UPP2 1182 aaPredicted RBP16.24■□□□□ 0.19
TCOF1-209ENST00000506630 PCDHAC2Q9Y5I4 1007 aa16.24■□□□□ 0.19
TCOF1-209ENST00000506630 FRAT2O75474 233 aaPredicted RBP16.23■□□□□ 0.19
TCOF1-209ENST00000506630 SREBF2Q12772 1141 aa16.23■□□□□ 0.19
TCOF1-209ENST00000506630 G3BP1Q13283 466 aaKnown RBP eCLIP16.23■□□□□ 0.194e-7■■□□□ 14.2
TCOF1-209ENST00000506630 PDE3AQ14432 1141 aa16.23■□□□□ 0.19
TCOF1-209ENST00000506630 CERS5Q8N5B7 392 aa16.23■□□□□ 0.19
TCOF1-209ENST00000506630 BCAMP50895 628 aa16.22■□□□□ 0.19
TCOF1-209ENST00000506630 OS9Q13438 667 aaPredicted RBP16.22■□□□□ 0.19
TCOF1-209ENST00000506630 POLA2Q14181 598 aa16.22■□□□□ 0.19
TCOF1-209ENST00000506630 CEP85Q6P2H3 762 aa16.22■□□□□ 0.19
TCOF1-209ENST00000506630 FBXO33Q7Z6M2 555 aa16.22■□□□□ 0.19
TCOF1-209ENST00000506630 KIAA0825Q8IV33 1275 aa16.22■□□□□ 0.19
TCOF1-209ENST00000506630 TDRD7Q8NHU6 1098 aaKnown RBP16.22■□□□□ 0.19
TCOF1-209ENST00000506630 SSH3Q8TE77 659 aa16.22■□□□□ 0.19
TCOF1-209ENST00000506630 CHMP4BQ9H444 224 aaKnown RBP16.22■□□□□ 0.19
TCOF1-209ENST00000506630 AOX1Q06278 1338 aa16.21■□□□□ 0.19
TCOF1-209ENST00000506630 FKTNO75072 461 aa16.21■□□□□ 0.19
TCOF1-209ENST00000506630 SASH1O94885 1247 aa16.21■□□□□ 0.19
TCOF1-209ENST00000506630 RRP1P56182 461 aaKnown RBP16.21■□□□□ 0.19
TCOF1-209ENST00000506630 TFCP2Q12800 502 aa16.21■□□□□ 0.19
TCOF1-209ENST00000506630 CHAF1AQ13111 956 aaPredicted RBP16.21■□□□□ 0.19
TCOF1-209ENST00000506630 MAPK8IP2Q13387 824 aaPredicted RBP16.21■□□□□ 0.19
TCOF1-209ENST00000506630 ARMC9Q7Z3E5 817 aa16.21■□□□□ 0.19
TCOF1-209ENST00000506630 GCC1Q96CN9 775 aa16.21■□□□□ 0.19
TCOF1-209ENST00000506630 FAM205AQ6ZU69 1335 aa16.2■□□□□ 0.18
TCOF1-209ENST00000506630 F8W031 263 aaPredicted RBP16.2■□□□□ 0.18
TCOF1-209ENST00000506630 WNT10BO00744 389 aa16.2■□□□□ 0.18
TCOF1-209ENST00000506630 SURF6O75683 361 aaKnown RBP16.2■□□□□ 0.18
TCOF1-209ENST00000506630 MMP14P50281 582 aa16.2■□□□□ 0.18
TCOF1-209ENST00000506630 MKRN3Q13064 507 aaKnown RBP16.2■□□□□ 0.18
TCOF1-209ENST00000506630 ALDH1A1P00352 501 aa16.19■□□□□ 0.18
TCOF1-209ENST00000506630 ADORA1P30542 326 aa16.19■□□□□ 0.18
TCOF1-209ENST00000506630 FKBP1AP62942 108 aaKnown RBP16.19■□□□□ 0.18
TCOF1-209ENST00000506630 MFSD14BQ5SR56 506 aa16.19■□□□□ 0.18
TCOF1-209ENST00000506630 CFHR5Q9BXR6 569 aa16.19■□□□□ 0.18
TCOF1-209ENST00000506630 ZBTB40Q9NUA8 1239 aa16.19■□□□□ 0.18
TCOF1-209ENST00000506630 AKAP2Q9Y2D5 859 aa16.19■□□□□ 0.18
TCOF1-209ENST00000506630 MYH2Q9UKX2 1941 aa16.18■□□□□ 0.18
TCOF1-209ENST00000506630 A0A1B0GUL7 405 aa16.18■□□□□ 0.18
TCOF1-209ENST00000506630 PRKG1Q13976 671 aa16.18■□□□□ 0.18
TCOF1-209ENST00000506630 ZBED3Q96IU2 234 aaPredicted RBP16.18■□□□□ 0.18
TCOF1-209ENST00000506630 FZD1Q9UP38 647 aa16.18■□□□□ 0.18
TCOF1-209ENST00000506630 COL1A1P02452 1464 aaPredicted RBP16.17■□□□□ 0.18
TCOF1-209ENST00000506630 PHKA1P46020 1223 aa16.17■□□□□ 0.18
TCOF1-209ENST00000506630 INHBEP58166 350 aa16.17■□□□□ 0.18
TCOF1-209ENST00000506630 TIMM10P62072 90 aa16.17■□□□□ 0.18
TCOF1-209ENST00000506630 APOBEC3FQ8IUX4 373 aaKnown RBP16.17■□□□□ 0.18
TCOF1-209ENST00000506630 NEUROD6Q96NK8 337 aa16.17■□□□□ 0.18
TCOF1-209ENST00000506630 GNL3LQ9NVN8 582 aaKnown RBP16.17■□□□□ 0.18
TCOF1-209ENST00000506630 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.17■□□□□ 0.18
TCOF1-209ENST00000506630 MYO5AQ9Y4I1 1855 aaKnown RBP16.16■□□□□ 0.18
TCOF1-209ENST00000506630 GRIK5Q16478 980 aa16.16■□□□□ 0.18
TCOF1-209ENST00000506630 RPAP2Q8IXW5 612 aaPredicted RBP16.16■□□□□ 0.18
TCOF1-209ENST00000506630 TBC1D22AQ8WUA7 517 aa16.16■□□□□ 0.18
TCOF1-209ENST00000506630 XAGE2Q96GT9 111 aa16.16■□□□□ 0.18
TCOF1-209ENST00000506630 EXOC6BQ9Y2D4 811 aa16.16■□□□□ 0.18
TCOF1-209ENST00000506630 NOP58Q9Y2X3 529 aaKnown RBP16.16■□□□□ 0.18
TCOF1-209ENST00000506630 MANSC4A6NHS7 340 aaPredicted RBP16.15■□□□□ 0.18
TCOF1-209ENST00000506630 HMMRO75330 724 aa16.15■□□□□ 0.18
TCOF1-209ENST00000506630 LDLRAD1Q5T700 205 aa16.15■□□□□ 0.18
TCOF1-209ENST00000506630 SPRYD7Q5W111 196 aa16.15■□□□□ 0.18
TCOF1-209ENST00000506630 CCDC102BQ68D86 513 aa16.15■□□□□ 0.18
TCOF1-209ENST00000506630 SLC10A4Q96EP9 437 aa16.15■□□□□ 0.18
TCOF1-209ENST00000506630 ANGEL1Q9UNK9 670 aaKnown RBP16.15■□□□□ 0.18
TCOF1-209ENST00000506630 TTF2Q9UNY4 1162 aaKnown RBP16.15■□□□□ 0.18
TCOF1-209ENST00000506630 RBM5P52756 815 aaKnown RBP eCLIP16.14■□□□□ 0.17
TCOF1-209ENST00000506630 DLGAP5Q15398 846 aa16.14■□□□□ 0.17
TCOF1-209ENST00000506630 CFAP100Q494V2 611 aa16.14■□□□□ 0.17
TCOF1-209ENST00000506630 TNNI3KQ59H18 835 aa16.14■□□□□ 0.17
TCOF1-209ENST00000506630 GORABQ5T7V8 394 aa16.14■□□□□ 0.17
TCOF1-209ENST00000506630 R3HDMLQ9H3Y0 253 aa16.14■□□□□ 0.17
TCOF1-209ENST00000506630 DENND2AQ9ULE3 1009 aa16.14■□□□□ 0.17
TCOF1-209ENST00000506630 TRIM17Q9Y577 477 aa16.14■□□□□ 0.17
TCOF1-209ENST00000506630 FPGT-TNNI3KV9GXZ4 949 aa16.14■□□□□ 0.17
TCOF1-209ENST00000506630 AK9Q5TCS8 1911 aa16.13■□□□□ 0.17
TCOF1-209ENST00000506630 ERC1Q8IUD2 1116 aa16.13■□□□□ 0.17
TCOF1-209ENST00000506630 WDR66Q8TBY9 1149 aa16.13■□□□□ 0.17
TCOF1-209ENST00000506630 PRMT6Q96LA8 375 aaPredicted RBP16.13■□□□□ 0.17
TCOF1-209ENST00000506630 SEMA3EO15041 775 aa16.12■□□□□ 0.17
TCOF1-209ENST00000506630 PPP1R12BO60237 982 aaPredicted RBP16.12■□□□□ 0.17
TCOF1-209ENST00000506630 SIRT2Q8IXJ6 389 aa16.12■□□□□ 0.17
TCOF1-209ENST00000506630 GPR108Q9NPR9 543 aa16.12■□□□□ 0.17
TCOF1-209ENST00000506630 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.12■□□□□ 0.17
TCOF1-209ENST00000506630 MAST2Q6P0Q8 1798 aa16.12■□□□□ 0.17
TCOF1-209ENST00000506630 APBB1O00213 710 aa16.11■□□□□ 0.17
TCOF1-209ENST00000506630 ZBTB48P10074 688 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms