RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 SLC5A1P13866 664 aa20.83■□□□□ 0.93
SYNE4-207ENST00000505054 IL1R1P14778 569 aa20.83■□□□□ 0.93
SYNE4-207ENST00000505054 NF2P35240 595 aa20.83■□□□□ 0.93
SYNE4-207ENST00000505054 FBXO33Q7Z6M2 555 aa20.83■□□□□ 0.93
SYNE4-207ENST00000505054 FBXW7Q969H0 707 aa20.83■□□□□ 0.93
SYNE4-207ENST00000505054 SCAF8Q9UPN6 1271 aaKnown RBP20.83■□□□□ 0.93
SYNE4-207ENST00000505054 COL1A1P02452 1464 aaPredicted RBP20.82■□□□□ 0.92
SYNE4-207ENST00000505054 HMMRO75330 724 aa20.82■□□□□ 0.92
SYNE4-207ENST00000505054 HIBADHP31937 336 aaKnown RBP20.82■□□□□ 0.92
SYNE4-207ENST00000505054 TTLL12Q14166 644 aaPredicted RBP20.82■□□□□ 0.92
SYNE4-207ENST00000505054 MXD3Q9BW11 206 aa20.82■□□□□ 0.92
SYNE4-207ENST00000505054 EXOC6BQ9Y2D4 811 aa20.82■□□□□ 0.92
SYNE4-207ENST00000505054 UBE2Q2LH0YL09 131 aa20.81■□□□□ 0.92
SYNE4-207ENST00000505054 OS9Q13438 667 aaPredicted RBP20.81■□□□□ 0.92
SYNE4-207ENST00000505054 PCDHB15Q9Y5E8 787 aa20.81■□□□□ 0.92
SYNE4-207ENST00000505054 ADORA1P30542 326 aa20.8■□□□□ 0.92
SYNE4-207ENST00000505054 BCAMP50895 628 aa20.8■□□□□ 0.92
SYNE4-207ENST00000505054 PKN2Q16513 984 aaKnown RBP20.8■□□□□ 0.92
SYNE4-207ENST00000505054 PRAMEF18Q5VWM3 479 aa20.8■□□□□ 0.92
SYNE4-207ENST00000505054 APOBEC3FQ8IUX4 373 aaKnown RBP20.8■□□□□ 0.92
SYNE4-207ENST00000505054 TDRD7Q8NHU6 1098 aaKnown RBP20.8■□□□□ 0.92
SYNE4-207ENST00000505054 ARAP2Q8WZ64 1704 aa20.8■□□□□ 0.92
SYNE4-207ENST00000505054 A0A1B0GUL7 405 aa20.79■□□□□ 0.92
SYNE4-207ENST00000505054 TIMM10P62072 90 aa20.79■□□□□ 0.92
SYNE4-207ENST00000505054 GTF2IP78347 998 aa20.79■□□□□ 0.92
SYNE4-207ENST00000505054 CAVIN4Q5BKX8 364 aa20.79■□□□□ 0.92
SYNE4-207ENST00000505054 NOM1Q5C9Z4 860 aaKnown RBP20.79■□□□□ 0.92
SYNE4-207ENST00000505054 ZNF296Q8WUU4 475 aaPredicted RBP20.79■□□□□ 0.92
SYNE4-207ENST00000505054 HDAC9Q9UKV0 1011 aa20.79■□□□□ 0.92
SYNE4-207ENST00000505054 HPS5Q9UPZ3 1129 aa20.79■□□□□ 0.92
SYNE4-207ENST00000505054 AKAP2Q9Y2D5 859 aa20.79■□□□□ 0.92
SYNE4-207ENST00000505054 TM4SF4P48230 202 aa20.78■□□□□ 0.92
SYNE4-207ENST00000505054 SREBF2Q12772 1141 aa20.78■□□□□ 0.92
SYNE4-207ENST00000505054 TTLL5Q6EMB2 1281 aa20.78■□□□□ 0.92
SYNE4-207ENST00000505054 VPS37DQ86XT2 251 aa20.78■□□□□ 0.92
SYNE4-207ENST00000505054 EXOC6Q8TAG9 804 aa20.78■□□□□ 0.92
SYNE4-207ENST00000505054 TBC1D8O95759 1140 aa20.77■□□□□ 0.92
SYNE4-207ENST00000505054 ARMC9Q7Z3E5 817 aa20.77■□□□□ 0.92
SYNE4-207ENST00000505054 GPR108Q9NPR9 543 aa20.77■□□□□ 0.92
SYNE4-207ENST00000505054 IQSEC3Q9UPP2 1182 aaPredicted RBP20.77■□□□□ 0.92
SYNE4-207ENST00000505054 JAG2Q9Y219 1238 aa20.77■□□□□ 0.92
SYNE4-207ENST00000505054 FAM205AQ6ZU69 1335 aa20.77■□□□□ 0.91
SYNE4-207ENST00000505054 PHKA1P46020 1223 aa20.76■□□□□ 0.91
SYNE4-207ENST00000505054 HSP90AB4PQ58FF6 505 aa20.76■□□□□ 0.91
SYNE4-207ENST00000505054 TNNI3KQ59H18 835 aa20.76■□□□□ 0.91
SYNE4-207ENST00000505054 KIAA0825Q8IV33 1275 aa20.76■□□□□ 0.91
SYNE4-207ENST00000505054 CERS5Q8N5B7 392 aa20.76■□□□□ 0.91
SYNE4-207ENST00000505054 XAGE2Q96GT9 111 aa20.76■□□□□ 0.91
SYNE4-207ENST00000505054 ZBED3Q96IU2 234 aaPredicted RBP20.76■□□□□ 0.91
SYNE4-207ENST00000505054 CFHR5Q9BXR6 569 aa20.76■□□□□ 0.91
SYNE4-207ENST00000505054 FPGT-TNNI3KV9GXZ4 949 aa20.76■□□□□ 0.91
SYNE4-207ENST00000505054 IRX6P78412 446 aaPredicted RBP20.75■□□□□ 0.91
SYNE4-207ENST00000505054 ERC1Q8IUD2 1116 aa20.75■□□□□ 0.91
SYNE4-207ENST00000505054 NEUROD6Q96NK8 337 aa20.75■□□□□ 0.91
SYNE4-207ENST00000505054 GPR25O00155 361 aa20.74■□□□□ 0.91
SYNE4-207ENST00000505054 MKRN3Q13064 507 aaKnown RBP20.74■□□□□ 0.91
SYNE4-207ENST00000505054 CCDC102BQ68D86 513 aa20.74■□□□□ 0.91
SYNE4-207ENST00000505054 RHPN1Q8TCX5 695 aa20.74■□□□□ 0.91
SYNE4-207ENST00000505054 APBB1O00213 710 aa20.73■□□□□ 0.91
SYNE4-207ENST00000505054 AAMPQ13685 434 aa20.73■□□□□ 0.91
SYNE4-207ENST00000505054 PRPF38BQ5VTL8 546 aaKnown RBP20.73■□□□□ 0.91
SYNE4-207ENST00000505054 EAF2Q96CJ1 260 aaPredicted RBP20.73■□□□□ 0.91
SYNE4-207ENST00000505054 PCDH10Q9P2E7 1040 aa20.73■□□□□ 0.91
SYNE4-207ENST00000505054 SSC5DA1L4H1 1573 aa20.72■□□□□ 0.91
SYNE4-207ENST00000505054 RAB11FIP3O75154 756 aa20.72■□□□□ 0.91
SYNE4-207ENST00000505054 FKBP1AP62942 108 aaKnown RBP20.72■□□□□ 0.91
SYNE4-207ENST00000505054 CHAF1AQ13111 956 aaPredicted RBP20.72■□□□□ 0.91
SYNE4-207ENST00000505054 LDLRAD1Q5T700 205 aa20.72■□□□□ 0.91
SYNE4-207ENST00000505054 FBXO46Q6PJ61 603 aaPredicted RBP20.72■□□□□ 0.91
SYNE4-207ENST00000505054 KIF1BPQ96EK5 621 aa20.72■□□□□ 0.91
SYNE4-207ENST00000505054 DBNDD2Q9BQY9 259 aa20.72■□□□□ 0.91
SYNE4-207ENST00000505054 IL1RAPL2Q9NP60 686 aa20.72■□□□□ 0.91
SYNE4-207ENST00000505054 TLR7Q9NYK1 1049 aaKnown RBP20.72■□□□□ 0.91
SYNE4-207ENST00000505054 ZBTB22O15209 634 aa20.71■□□□□ 0.91
SYNE4-207ENST00000505054 FKTNO75072 461 aa20.71■□□□□ 0.91
SYNE4-207ENST00000505054 FRAT2O75474 233 aaPredicted RBP20.71■□□□□ 0.91
SYNE4-207ENST00000505054 PRKG1Q13976 671 aa20.71■□□□□ 0.91
SYNE4-207ENST00000505054 SPRYD7Q5W111 196 aa20.71■□□□□ 0.91
SYNE4-207ENST00000505054 DCTPP1Q9H773 170 aa20.71■□□□□ 0.91
SYNE4-207ENST00000505054 GNL3LQ9NVN8 582 aaKnown RBP20.71■□□□□ 0.91
SYNE4-207ENST00000505054 DBNLQ9UJU6 430 aaKnown RBP20.71■□□□□ 0.91
SYNE4-207ENST00000505054 ANGEL1Q9UNK9 670 aaKnown RBP20.71■□□□□ 0.91
SYNE4-207ENST00000505054 PPP2R3BQ9Y5P8 575 aa20.71■□□□□ 0.91
SYNE4-207ENST00000505054 OTOFQ9HC10 1997 aa20.71■□□□□ 0.91
SYNE4-207ENST00000505054 ALDH1A1P00352 501 aa20.7■□□□□ 0.9
SYNE4-207ENST00000505054 DLGAP5Q15398 846 aa20.7■□□□□ 0.9
SYNE4-207ENST00000505054 MFSD14BQ5SR56 506 aa20.7■□□□□ 0.9
SYNE4-207ENST00000505054 MTMR14Q8NCE2 650 aa20.7■□□□□ 0.9
SYNE4-207ENST00000505054 CCDC8Q9H0W5 538 aaPredicted RBP20.7■□□□□ 0.9
SYNE4-207ENST00000505054 SEMA3EO15041 775 aa20.69■□□□□ 0.9
SYNE4-207ENST00000505054 RASGRF1Q13972 1273 aa20.69■□□□□ 0.9
SYNE4-207ENST00000505054 GRIK5Q16478 980 aa20.69■□□□□ 0.9
SYNE4-207ENST00000505054 MAP3K11Q16584 847 aa20.69■□□□□ 0.9
SYNE4-207ENST00000505054 GORABQ5T7V8 394 aa20.69■□□□□ 0.9
SYNE4-207ENST00000505054 AACSQ86V21 672 aa20.69■□□□□ 0.9
SYNE4-207ENST00000505054 DEFB129Q9H1M3 183 aa20.69■□□□□ 0.9
SYNE4-207ENST00000505054 RBBP6Q7Z6E9 1792 aaKnown RBP20.69■□□□□ 0.9
SYNE4-207ENST00000505054 MANSC4A6NHS7 340 aaPredicted RBP20.68■□□□□ 0.9
SYNE4-207ENST00000505054 ARID4AP29374 1257 aaPredicted RBP20.68■□□□□ 0.9
SYNE4-207ENST00000505054 DENND2AQ9ULE3 1009 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms