RNA–Protein interactions for RNA: ENST00000504813.5

CNBP-208, Transcript of CCHC-type zinc finger nucleic acid binding protein, human

APPRIS ALT1 TSL 2 BASIC

Gene CNBP, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNBP-208	ENST00000504813	CRK	P46108	304 aa		18.25	■□□□□ 0.51
CNBP-208	ENST00000504813	FTSJ3	Q8IY81	847 aa	Known RBP	18.25	■□□□□ 0.51
CNBP-208	ENST00000504813	PRDM10	Q9NQV6	1147 aa		18.25	■□□□□ 0.51
CNBP-208	ENST00000504813	NF2	P35240	595 aa		18.24	■□□□□ 0.51
CNBP-208	ENST00000504813	LBX1	P52954	281 aa		18.24	■□□□□ 0.51
CNBP-208	ENST00000504813	HDLBP	Q00341	1268 aa	Known RBP	18.24	■□□□□ 0.51
CNBP-208	ENST00000504813	PPP2R3B	Q9Y5P8	575 aa		18.24	■□□□□ 0.51
CNBP-208	ENST00000504813	UBE2Q2L	H0YL09	131 aa		18.23	■□□□□ 0.51
CNBP-208	ENST00000504813	ZBTB7B	O15156	539 aa	Predicted RBP	18.23	■□□□□ 0.51
CNBP-208	ENST00000504813	MS4A1	P11836	297 aa		18.23	■□□□□ 0.51
CNBP-208	ENST00000504813	SPDYE2	Q495Y8	402 aa		18.23	■□□□□ 0.51
CNBP-208	ENST00000504813	BEGAIN	Q9BUH8	593 aa		18.23	■□□□□ 0.51
CNBP-208	ENST00000504813	SUGT1	Q9Y2Z0	365 aa		18.23	■□□□□ 0.51
CNBP-208	ENST00000504813	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	18.23	■□□□□ 0.51
CNBP-208	ENST00000504813	SSC5D	A1L4H1	1573 aa		18.23	■□□□□ 0.51
CNBP-208	ENST00000504813	ZBTB22	O15209	634 aa		18.23	■□□□□ 0.51
CNBP-208	ENST00000504813	ADORA1	P30542	326 aa		18.23	■□□□□ 0.51
CNBP-208	ENST00000504813	PHKA1	P46020	1223 aa		18.23	■□□□□ 0.51
CNBP-208	ENST00000504813	TIMM10	P62072	90 aa		18.23	■□□□□ 0.51
CNBP-208	ENST00000504813	TFCP2	Q12800	502 aa		18.23	■□□□□ 0.51
CNBP-208	ENST00000504813	PDE3A	Q14432	1141 aa		18.23	■□□□□ 0.51
CNBP-208	ENST00000504813	RASAL3	Q86YV0	1011 aa		18.23	■□□□□ 0.51
CNBP-208	ENST00000504813	ITPRIP	Q8IWB1	547 aa		18.23	■□□□□ 0.51
CNBP-208	ENST00000504813	WDR66	Q8TBY9	1149 aa		18.23	■□□□□ 0.51
CNBP-208	ENST00000504813	MRI	Q9BWK5	157 aa		18.23	■□□□□ 0.51
CNBP-208	ENST00000504813	TDRD3	Q9H7E2	651 aa	Known RBP	18.23	■□□□□ 0.51
CNBP-208	ENST00000504813	VEZT	Q9HBM0	779 aa		18.23	■□□□□ 0.51
CNBP-208	ENST00000504813	ZNF70	Q9UC06	446 aa	Predicted RBP	18.23	■□□□□ 0.51
CNBP-208	ENST00000504813	KIF23	Q02241	960 aa	Predicted RBP	18.22	■□□□□ 0.51
CNBP-208	ENST00000504813	TTLL12	Q14166	644 aa	Predicted RBP	18.22	■□□□□ 0.51
CNBP-208	ENST00000504813	EXOC6	Q8TAG9	804 aa		18.22	■□□□□ 0.51
CNBP-208	ENST00000504813		A0A1B0GUL7	405 aa		18.21	■□□□□ 0.51
CNBP-208	ENST00000504813	POLA2	Q14181	598 aa		18.21	■□□□□ 0.51
CNBP-208	ENST00000504813	CCDC102B	Q68D86	513 aa		18.21	■□□□□ 0.51
CNBP-208	ENST00000504813	TEKT1	Q969V4	418 aa		18.21	■□□□□ 0.51
CNBP-208	ENST00000504813	CRBN	Q96SW2	442 aa		18.21	■□□□□ 0.51
CNBP-208	ENST00000504813	GNL3L	Q9NVN8	582 aa	Known RBP	18.21	■□□□□ 0.51
CNBP-208	ENST00000504813	AKAP2	Q9Y2D5	859 aa		18.21	■□□□□ 0.51
CNBP-208	ENST00000504813	LAMB1	P07942	1786 aa		18.21	■□□□□ 0.51
CNBP-208	ENST00000504813	MYH2	Q9UKX2	1941 aa		18.21	■□□□□ 0.51
CNBP-208	ENST00000504813	MAST3	O60307	1309 aa		18.21	■□□□□ 0.51
CNBP-208	ENST00000504813	SEMA3E	O15041	775 aa		18.2	■□□□□ 0.5
CNBP-208	ENST00000504813	ATP8B2	P98198	1209 aa		18.2	■□□□□ 0.5
CNBP-208	ENST00000504813	PRKG1	Q13976	671 aa		18.2	■□□□□ 0.5
CNBP-208	ENST00000504813	RASA3	Q14644	834 aa		18.2	■□□□□ 0.5
CNBP-208	ENST00000504813	C20orf194	Q5TEA3	1177 aa		18.2	■□□□□ 0.5
CNBP-208	ENST00000504813	ARMC9	Q7Z3E5	817 aa		18.2	■□□□□ 0.5
CNBP-208	ENST00000504813	TNS4	Q8IZW8	715 aa		18.2	■□□□□ 0.5
CNBP-208	ENST00000504813	SSH3	Q8TE77	659 aa		18.2	■□□□□ 0.5
CNBP-208	ENST00000504813	ZDHHC15	Q96MV8	337 aa		18.2	■□□□□ 0.5
CNBP-208	ENST00000504813	C1orf115	Q9H7X2	142 aa		18.2	■□□□□ 0.5
CNBP-208	ENST00000504813	FZD1	Q9UP38	647 aa		18.2	■□□□□ 0.5
CNBP-208	ENST00000504813	OTOF	Q9HC10	1997 aa		18.2	■□□□□ 0.5
CNBP-208	ENST00000504813	CA12	O43570	354 aa		18.19	■□□□□ 0.5
CNBP-208	ENST00000504813	TNFAIP1	Q13829	316 aa		18.19	■□□□□ 0.5
CNBP-208	ENST00000504813	MAP3K11	Q16584	847 aa		18.19	■□□□□ 0.5
CNBP-208	ENST00000504813	LDLRAD1	Q5T700	205 aa		18.19	■□□□□ 0.5
CNBP-208	ENST00000504813	NBPF12	Q5TAG4	269 aa	Predicted RBP	18.19	■□□□□ 0.5
CNBP-208	ENST00000504813	HHIPL2	Q6UWX4	724 aa		18.19	■□□□□ 0.5
CNBP-208	ENST00000504813	PANK1	Q8TE04	598 aa		18.19	■□□□□ 0.5
CNBP-208	ENST00000504813	XAGE2	Q96GT9	111 aa		18.19	■□□□□ 0.5
CNBP-208	ENST00000504813	TSKS	Q9UJT2	592 aa		18.19	■□□□□ 0.5
CNBP-208	ENST00000504813	DENND2A	Q9ULE3	1009 aa		18.19	■□□□□ 0.5
CNBP-208	ENST00000504813	SALL1	Q9NSC2	1324 aa		18.19	■□□□□ 0.5
CNBP-208	ENST00000504813	CASP8AP2	Q9UKL3	1982 aa		18.19	■□□□□ 0.5
CNBP-208	ENST00000504813	G3BP1	Q13283	466 aa	Known RBP eCLIP	18.18	■□□□□ 0.5	1e-8	■■□□□ 12.5
CNBP-208	ENST00000504813	APOBEC3H	Q6NTF7	200 aa	Known RBP	18.18	■□□□□ 0.5
CNBP-208	ENST00000504813	CCDC136	Q96JN2	1154 aa		18.18	■□□□□ 0.5
CNBP-208	ENST00000504813	CSRNP1	Q96S65	589 aa		18.18	■□□□□ 0.5
CNBP-208	ENST00000504813	ANGEL1	Q9UNK9	670 aa	Known RBP	18.18	■□□□□ 0.5
CNBP-208	ENST00000504813	KCNA4	P22459	653 aa		18.18	■□□□□ 0.5
CNBP-208	ENST00000504813	PRDX5	P30044	214 aa		18.18	■□□□□ 0.5
CNBP-208	ENST00000504813	SUPT20HL1	Q3ZLR7	823 aa		18.18	■□□□□ 0.5
CNBP-208	ENST00000504813	TEPSIN	Q96N21	525 aa		18.18	■□□□□ 0.5
CNBP-208	ENST00000504813	TCP10L2	B9ZVM9	353 aa		18.17	■□□□□ 0.5
CNBP-208	ENST00000504813	RASGRF1	Q13972	1273 aa		18.17	■□□□□ 0.5
CNBP-208	ENST00000504813	PDS5A	Q29RF7	1337 aa	Known RBP	18.17	■□□□□ 0.5
CNBP-208	ENST00000504813	PPP1R12B	O60237	982 aa	Predicted RBP	18.16	■□□□□ 0.5
CNBP-208	ENST00000504813	MVP	Q14764	893 aa	Known RBP	18.16	■□□□□ 0.5
CNBP-208	ENST00000504813	CDAN1	Q8IWY9	1227 aa		18.16	■□□□□ 0.5
CNBP-208	ENST00000504813	REM2	Q8IYK8	340 aa	Predicted RBP	18.16	■□□□□ 0.5
CNBP-208	ENST00000504813	NEUROD6	Q96NK8	337 aa		18.16	■□□□□ 0.5
CNBP-208	ENST00000504813	USP2	O75604	605 aa	Predicted RBP	18.15	■□□□□ 0.5
CNBP-208	ENST00000504813	LDHB	P07195	334 aa	Known RBP	18.15	■□□□□ 0.5
CNBP-208	ENST00000504813	TNNI2	P48788	182 aa		18.15	■□□□□ 0.5
CNBP-208	ENST00000504813	CACNB3	P54284	484 aa		18.15	■□□□□ 0.5
CNBP-208	ENST00000504813	TMEM39B	Q9GZU3	492 aa		18.15	■□□□□ 0.5
CNBP-208	ENST00000504813	SAGE1	Q9NXZ1	904 aa		18.15	■□□□□ 0.5
CNBP-208	ENST00000504813	DIXDC1	Q155Q3	683 aa		18.14	■□□□□ 0.49
CNBP-208	ENST00000504813	FKBP1C	Q5VVH2	108 aa		18.14	■□□□□ 0.49
CNBP-208	ENST00000504813	B4GALNT3	Q6L9W6	998 aa		18.14	■□□□□ 0.49
CNBP-208	ENST00000504813	RNF186	Q9NXI6	227 aa		18.14	■□□□□ 0.49
CNBP-208	ENST00000504813	NOP58	Q9Y2X3	529 aa	Known RBP	18.14	■□□□□ 0.49
CNBP-208	ENST00000504813	DAGLA	Q9Y4D2	1042 aa		18.14	■□□□□ 0.49
CNBP-208	ENST00000504813	AK9	Q5TCS8	1911 aa		18.14	■□□□□ 0.49
CNBP-208	ENST00000504813	UNCX	A6NJT0	531 aa		18.13	■□□□□ 0.49
CNBP-208	ENST00000504813	SURF6	O75683	361 aa	Known RBP	18.13	■□□□□ 0.49
CNBP-208	ENST00000504813	CEP85	Q6P2H3	762 aa		18.13	■□□□□ 0.49
CNBP-208	ENST00000504813	FAM83A	Q86UY5	434 aa		18.13	■□□□□ 0.49
CNBP-208	ENST00000504813	ZGPAT	Q8N5A5	531 aa	Known RBP	18.13	■□□□□ 0.49

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