RNA–Protein interactions for RNA: ENST00000504679.5

DDR1-254, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 460 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-254ENST00000504679 KIF4BQ2VIQ3 1234 aa22.16■■□□□ 1.14
DDR1-254ENST00000504679 SERPINA10Q9UK55 444 aa22.16■■□□□ 1.14
DDR1-254ENST00000504679 IGSF3O75054 1194 aa22.15■■□□□ 1.14
DDR1-254ENST00000504679 TOMM70O94826 608 aa22.15■■□□□ 1.14
DDR1-254ENST00000504679 MX1P20591 662 aa22.15■■□□□ 1.14
DDR1-254ENST00000504679 PRDX5P30044 214 aa22.15■■□□□ 1.14
DDR1-254ENST00000504679 TTF1Q15361 905 aaPredicted RBP22.15■■□□□ 1.14
DDR1-254ENST00000504679 CENPQQ7L2Z9 268 aaPredicted RBP22.15■■□□□ 1.14
DDR1-254ENST00000504679 SLF2Q8IX21 1173 aa22.15■■□□□ 1.14
DDR1-254ENST00000504679 MTMR14Q8NCE2 650 aa22.15■■□□□ 1.14
DDR1-254ENST00000504679 PPP4R2Q9NY27 417 aa22.15■■□□□ 1.14
DDR1-254ENST00000504679 AKAP11Q9UKA4 1901 aa22.15■■□□□ 1.14
DDR1-254ENST00000504679 CRKP46108 304 aa22.14■■□□□ 1.13
DDR1-254ENST00000504679 HIRAP54198 1017 aaPredicted RBP22.14■■□□□ 1.13
DDR1-254ENST00000504679 CFAP100Q494V2 611 aa22.14■■□□□ 1.13
DDR1-254ENST00000504679 LDHDQ86WU2 507 aa22.14■■□□□ 1.13
DDR1-254ENST00000504679 DZIP1Q86YF9 867 aaKnown RBP22.14■■□□□ 1.13
DDR1-254ENST00000504679 TRPM4Q8TD43 1214 aa22.14■■□□□ 1.13
DDR1-254ENST00000504679 OTUD7AQ8TE49 926 aaPredicted RBP22.14■■□□□ 1.13
DDR1-254ENST00000504679 ZC3H15Q8WU90 426 aaKnown RBP22.14■■□□□ 1.13
DDR1-254ENST00000504679 TEKT1Q969V4 418 aa22.14■■□□□ 1.13
DDR1-254ENST00000504679 DNAJC2Q99543 621 aaKnown RBP22.14■■□□□ 1.13
DDR1-254ENST00000504679 HAUS7Q99871 368 aa22.14■■□□□ 1.13
DDR1-254ENST00000504679 RAI14Q9P0K7 980 aa22.14■■□□□ 1.13
DDR1-254ENST00000504679 GLRX3O76003 335 aaKnown RBP22.13■■□□□ 1.13
DDR1-254ENST00000504679 EGFRP00533 1210 aa22.13■■□□□ 1.13
DDR1-254ENST00000504679 HHIPL2Q6UWX4 724 aa22.13■■□□□ 1.13
DDR1-254ENST00000504679 STAP2Q9UGK3 403 aa22.13■■□□□ 1.13
DDR1-254ENST00000504679 GSTO1P78417 241 aa22.12■■□□□ 1.13
DDR1-254ENST00000504679 PAG1Q9NWQ8 432 aa22.12■■□□□ 1.13
DDR1-254ENST00000504679 PGAP2Q9UHJ9 254 aa22.12■■□□□ 1.13
DDR1-254ENST00000504679 NDUFB9Q9Y6M9 179 aa22.12■■□□□ 1.13
DDR1-254ENST00000504679 SALL3Q9BXA9 1300 aa22.11■■□□□ 1.13
DDR1-254ENST00000504679 GOLIM4O00461 696 aa22.11■■□□□ 1.13
DDR1-254ENST00000504679 WNT10BO00744 389 aa22.11■■□□□ 1.13
DDR1-254ENST00000504679 MYO1BO43795 1136 aa22.11■■□□□ 1.13
DDR1-254ENST00000504679 LDHCP07864 332 aa22.11■■□□□ 1.13
DDR1-254ENST00000504679 PDE1AP54750 535 aa22.11■■□□□ 1.13
DDR1-254ENST00000504679 MECOMQ03112 1051 aa22.11■■□□□ 1.13
DDR1-254ENST00000504679 MAP3K12Q12852 859 aa22.11■■□□□ 1.13
DDR1-254ENST00000504679 NBPF9Q3BBW0 867 aa22.11■■□□□ 1.13
DDR1-254ENST00000504679 TSHZ3Q63HK5 1081 aa22.11■■□□□ 1.13
DDR1-254ENST00000504679 RBM46Q8TBY0 533 aaKnown RBP22.11■■□□□ 1.13
DDR1-254ENST00000504679 PRMT6Q96LA8 375 aaPredicted RBP22.11■■□□□ 1.13
DDR1-254ENST00000504679 ANTXR1Q9H6X2 564 aa22.11■■□□□ 1.13
DDR1-254ENST00000504679 PIH1D3Q9NQM4 214 aaKnown RBP22.11■■□□□ 1.13
DDR1-254ENST00000504679 POTEIP0CG38 1075 aa22.1■■□□□ 1.13
DDR1-254ENST00000504679 POTEJP0CG39 1038 aa22.1■■□□□ 1.13
DDR1-254ENST00000504679 CHADLQ6NUI6 762 aa22.1■■□□□ 1.13
DDR1-254ENST00000504679 DCPSQ96C86 337 aaKnown RBP22.1■■□□□ 1.13
DDR1-254ENST00000504679 NSUN4Q96CB9 384 aaKnown RBP22.1■■□□□ 1.13
DDR1-254ENST00000504679 ZBED3Q96IU2 234 aaPredicted RBP22.1■■□□□ 1.13
DDR1-254ENST00000504679 ZDHHC15Q96MV8 337 aa22.1■■□□□ 1.13
DDR1-254ENST00000504679 SPDYE2BA6NHP3 402 aa22.09■■□□□ 1.13
DDR1-254ENST00000504679 IDH1O75874 414 aaKnown RBP22.09■■□□□ 1.13
DDR1-254ENST00000504679 SPDYE6P0CI01 402 aa22.09■■□□□ 1.13
DDR1-254ENST00000504679 SMC1BQ8NDV3 1235 aa22.09■■□□□ 1.13
DDR1-254ENST00000504679 PI4K2BQ8TCG2 481 aa22.09■■□□□ 1.13
DDR1-254ENST00000504679 FAM163AQ96GL9 167 aaPredicted RBP22.09■■□□□ 1.13
DDR1-254ENST00000504679 DIXDC1Q155Q3 683 aa22.08■■□□□ 1.13
DDR1-254ENST00000504679 NAA16Q6N069 864 aaPredicted RBP22.08■■□□□ 1.13
DDR1-254ENST00000504679 TMED8Q6PL24 325 aaPredicted RBP22.08■■□□□ 1.13
DDR1-254ENST00000504679 PLEKHM2Q8IWE5 1019 aa22.08■■□□□ 1.13
DDR1-254ENST00000504679 PCDHAC2Q9Y5I4 1007 aa22.08■■□□□ 1.13
DDR1-254ENST00000504679 CNTROBQ8N137 903 aa22.07■■□□□ 1.12
DDR1-254ENST00000504679 EDC3Q96F86 508 aaKnown RBP22.07■■□□□ 1.12
DDR1-254ENST00000504679 OSBPL3Q9H4L5 887 aa22.07■■□□□ 1.12
DDR1-254ENST00000504679 AOX1Q06278 1338 aa22.06■■□□□ 1.12
DDR1-254ENST00000504679 FSTL1Q12841 308 aa22.06■■□□□ 1.12
DDR1-254ENST00000504679 ANGEL2Q5VTE6 544 aaKnown RBP22.06■■□□□ 1.12
DDR1-254ENST00000504679 MAP1SQ66K74 1059 aaPredicted RBP22.06■■□□□ 1.12
DDR1-254ENST00000504679 CDC37L1Q7L3B6 337 aa22.06■■□□□ 1.12
DDR1-254ENST00000504679 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.06■■□□□ 1.12
DDR1-254ENST00000504679 TDRD3Q9H7E2 651 aaKnown RBP22.06■■□□□ 1.12
DDR1-254ENST00000504679 MYH2Q9UKX2 1941 aa22.06■■□□□ 1.12
DDR1-254ENST00000504679 ZSCAN25Q6NSZ9 544 aa22.05■■□□□ 1.12
DDR1-254ENST00000504679 APOBEC3HQ6NTF7 200 aaKnown RBP22.05■■□□□ 1.12
DDR1-254ENST00000504679 NOL10Q9BSC4 688 aaKnown RBP22.05■■□□□ 1.12
DDR1-254ENST00000504679 DAGLAQ9Y4D2 1042 aa22.05■■□□□ 1.12
DDR1-254ENST00000504679 MROH7-TTC4A0A0A0MT08 1334 aa22.05■■□□□ 1.12
DDR1-254ENST00000504679 PITPNM2Q9BZ72 1349 aa22.05■■□□□ 1.12
DDR1-254ENST00000504679 MAP4K4O95819 1239 aaPredicted RBP22.04■■□□□ 1.12
DDR1-254ENST00000504679 CYP7A1P22680 504 aa22.04■■□□□ 1.12
DDR1-254ENST00000504679 PDE4AP27815 886 aa22.04■■□□□ 1.12
DDR1-254ENST00000504679 SLC9C2Q5TAH2 1124 aa22.04■■□□□ 1.12
DDR1-254ENST00000504679 SULF1Q8IWU6 871 aa22.04■■□□□ 1.12
DDR1-254ENST00000504679 MAGEB6Q8N7X4 407 aa22.04■■□□□ 1.12
DDR1-254ENST00000504679 ZNF384Q8TF68 577 aa22.04■■□□□ 1.12
DDR1-254ENST00000504679 GGA3Q9NZ52 723 aa22.04■■□□□ 1.12
DDR1-254ENST00000504679 ZNF70Q9UC06 446 aaPredicted RBP22.04■■□□□ 1.12
DDR1-254ENST00000504679 POLR2AP24928 1970 aaKnown RBP22.04■■□□□ 1.12
DDR1-254ENST00000504679 MYO5AQ9Y4I1 1855 aaKnown RBP22.04■■□□□ 1.12
DDR1-254ENST00000504679 GAKO14976 1311 aa22.04■■□□□ 1.12
DDR1-254ENST00000504679 ASTN2O75129 1339 aaPredicted RBP22.04■■□□□ 1.12
DDR1-254ENST00000504679 GPR75-ASB3A0A0A6YYF3 556 aa22.03■■□□□ 1.12
DDR1-254ENST00000504679 BAG3O95817 575 aa22.03■■□□□ 1.12
DDR1-254ENST00000504679 LRRFIP1Q32MZ4 808 aaKnown RBP22.03■■□□□ 1.12
DDR1-254ENST00000504679 APOBEC3FQ8IUX4 373 aaKnown RBP22.03■■□□□ 1.12
DDR1-254ENST00000504679 USP40Q9NVE5 1235 aa22.03■■□□□ 1.12
DDR1-254ENST00000504679 TMOD2Q9NZR1 351 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms