RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 ZNF280AP59817 542 aaPredicted RBP14.57□□□□□ -0.08
PDLIM5-208ENST00000504489 ERICH6BQ5W0A0 696 aa14.57□□□□□ -0.08
PDLIM5-208ENST00000504489 TAF1DQ9H5J8 278 aaPredicted RBP14.57□□□□□ -0.08
PDLIM5-208ENST00000504489 HMG20BQ9P0W2 317 aa14.57□□□□□ -0.08
PDLIM5-208ENST00000504489 ZBTB47Q9UFB7 747 aaPredicted RBP14.57□□□□□ -0.08
PDLIM5-208ENST00000504489 JAG2Q9Y219 1238 aa14.57□□□□□ -0.08
PDLIM5-208ENST00000504489 SUGT1Q9Y2Z0 365 aa14.57□□□□□ -0.08
PDLIM5-208ENST00000504489 TRPM7Q96QT4 1865 aa14.57□□□□□ -0.08
PDLIM5-208ENST00000504489 EPHX2P34913 555 aa14.56□□□□□ -0.08
PDLIM5-208ENST00000504489 MCAMP43121 646 aa14.56□□□□□ -0.08
PDLIM5-208ENST00000504489 SCARF1Q14162 830 aa14.56□□□□□ -0.08
PDLIM5-208ENST00000504489 MICALL2Q8IY33 904 aa14.56□□□□□ -0.08
PDLIM5-208ENST00000504489 SPATA5Q8NB90 893 aa14.56□□□□□ -0.08
PDLIM5-208ENST00000504489 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.56□□□□□ -0.08
PDLIM5-208ENST00000504489 ADARB2Q9NS39 739 aaKnown RBP14.56□□□□□ -0.08
PDLIM5-208ENST00000504489 CDK5RAP2Q96SN8 1893 aa14.56□□□□□ -0.08
PDLIM5-208ENST00000504489 KIF3CO14782 793 aa14.55□□□□□ -0.08
PDLIM5-208ENST00000504489 NUCB1Q02818 461 aa14.55□□□□□ -0.08
PDLIM5-208ENST00000504489 USP50Q70EL3 339 aaPredicted RBP14.55□□□□□ -0.08
PDLIM5-208ENST00000504489 KIAA0825Q8IV33 1275 aa14.55□□□□□ -0.08
PDLIM5-208ENST00000504489 OGFOD1Q8N543 542 aa14.55□□□□□ -0.08
PDLIM5-208ENST00000504489 ZGPATQ8N5A5 531 aaKnown RBP14.55□□□□□ -0.08
PDLIM5-208ENST00000504489 BCL11AQ9H165 835 aa14.55□□□□□ -0.08
PDLIM5-208ENST00000504489 HDAC9Q9UKV0 1011 aa14.55□□□□□ -0.08
PDLIM5-208ENST00000504489 SHTN1A0MZ66 631 aa14.54□□□□□ -0.08
PDLIM5-208ENST00000504489 ATP5JP18859 108 aa14.54□□□□□ -0.08
PDLIM5-208ENST00000504489 PNMA8AQ86V59 439 aaPredicted RBP14.54□□□□□ -0.08
PDLIM5-208ENST00000504489 C16orf71Q8IYS4 520 aaPredicted RBP14.54□□□□□ -0.08
PDLIM5-208ENST00000504489 MAST3O60307 1309 aa14.53□□□□□ -0.08
PDLIM5-208ENST00000504489 SALL3Q9BXA9 1300 aa14.53□□□□□ -0.08
PDLIM5-208ENST00000504489 HDLBPQ00341 1268 aaKnown RBP14.53□□□□□ -0.08
PDLIM5-208ENST00000504489 GRIK5Q16478 980 aa14.53□□□□□ -0.08
PDLIM5-208ENST00000504489 SPTY2D1Q68D10 685 aaPredicted RBP14.53□□□□□ -0.08
PDLIM5-208ENST00000504489 B4GALNT3Q6L9W6 998 aa14.53□□□□□ -0.08
PDLIM5-208ENST00000504489 PI16Q6UXB8 463 aa14.53□□□□□ -0.08
PDLIM5-208ENST00000504489 CHD1LQ86WJ1 897 aa14.53□□□□□ -0.08
PDLIM5-208ENST00000504489 GPATCH3Q96I76 525 aa14.53□□□□□ -0.08
PDLIM5-208ENST00000504489 MRIQ9BWK5 157 aa14.53□□□□□ -0.08
PDLIM5-208ENST00000504489 SNRKQ9NRH2 765 aa14.53□□□□□ -0.08
PDLIM5-208ENST00000504489 ECHDC1Q9NTX5 307 aa14.53□□□□□ -0.08
PDLIM5-208ENST00000504489 TTF2Q9UNY4 1162 aaKnown RBP14.53□□□□□ -0.08
PDLIM5-208ENST00000504489 FOCADQ5VW36 1801 aa14.52□□□□□ -0.08
PDLIM5-208ENST00000504489 TTC41PQ6P2S7 1318 aa14.52□□□□□ -0.08
PDLIM5-208ENST00000504489 F8W031 263 aaPredicted RBP14.52□□□□□ -0.09
PDLIM5-208ENST00000504489 IGSF3O75054 1194 aa14.52□□□□□ -0.09
PDLIM5-208ENST00000504489 LDHBP07195 334 aaKnown RBP14.52□□□□□ -0.09
PDLIM5-208ENST00000504489 ZAP70P43403 619 aa14.52□□□□□ -0.09
PDLIM5-208ENST00000504489 SAMD7Q7Z3H4 446 aa14.52□□□□□ -0.09
PDLIM5-208ENST00000504489 MTMR14Q8NCE2 650 aa14.52□□□□□ -0.09
PDLIM5-208ENST00000504489 LNPKQ9C0E8 428 aa14.52□□□□□ -0.09
PDLIM5-208ENST00000504489 TSPYL2Q9H2G4 693 aaPredicted RBP14.52□□□□□ -0.09
PDLIM5-208ENST00000504489 MYOZ2Q9NPC6 264 aa14.52□□□□□ -0.09
PDLIM5-208ENST00000504489 CYP2E1P05181 493 aaPredicted RBP14.51□□□□□ -0.09
PDLIM5-208ENST00000504489 PRDX5P30044 214 aa14.51□□□□□ -0.09
PDLIM5-208ENST00000504489 HIRAP54198 1017 aaPredicted RBP14.51□□□□□ -0.09
PDLIM5-208ENST00000504489 KIF4BQ2VIQ3 1234 aa14.51□□□□□ -0.09
PDLIM5-208ENST00000504489 TBC1D10BQ4KMP7 808 aaPredicted RBP14.51□□□□□ -0.09
PDLIM5-208ENST00000504489 TRPM4Q8TD43 1214 aa14.51□□□□□ -0.09
PDLIM5-208ENST00000504489 OTUD7AQ8TE49 926 aaPredicted RBP14.51□□□□□ -0.09
PDLIM5-208ENST00000504489 ZC3H15Q8WU90 426 aaKnown RBP14.51□□□□□ -0.09
PDLIM5-208ENST00000504489 ZBED3Q96IU2 234 aaPredicted RBP14.51□□□□□ -0.09
PDLIM5-208ENST00000504489 ABCF2Q9UG63 623 aa14.51□□□□□ -0.09
PDLIM5-208ENST00000504489 STAP2Q9UGK3 403 aa14.51□□□□□ -0.09
PDLIM5-208ENST00000504489 SERPINA10Q9UK55 444 aa14.51□□□□□ -0.09
PDLIM5-208ENST00000504489 TOMM70O94826 608 aa14.5□□□□□ -0.09
PDLIM5-208ENST00000504489 EGFRP00533 1210 aa14.5□□□□□ -0.09
PDLIM5-208ENST00000504489 MX1P20591 662 aa14.5□□□□□ -0.09
PDLIM5-208ENST00000504489 EAPPQ56P03 285 aaPredicted RBP14.5□□□□□ -0.09
PDLIM5-208ENST00000504489 RBM26Q5T8P6 1007 aaKnown RBP14.5□□□□□ -0.09
PDLIM5-208ENST00000504489 HHIPL2Q6UWX4 724 aa14.5□□□□□ -0.09
PDLIM5-208ENST00000504489 TBC1D9Q6ZT07 1266 aa14.5□□□□□ -0.09
PDLIM5-208ENST00000504489 ERICH6Q7L0X2 663 aa14.5□□□□□ -0.09
PDLIM5-208ENST00000504489 CENPQQ7L2Z9 268 aaPredicted RBP14.5□□□□□ -0.09
PDLIM5-208ENST00000504489 LDHDQ86WU2 507 aa14.5□□□□□ -0.09
PDLIM5-208ENST00000504489 CCDC136Q96JN2 1154 aa14.5□□□□□ -0.09
PDLIM5-208ENST00000504489 PHF12Q96QT6 1004 aa14.5□□□□□ -0.09
PDLIM5-208ENST00000504489 HAUS7Q99871 368 aa14.5□□□□□ -0.09
PDLIM5-208ENST00000504489 BOLA2Q9H3K6 86 aa14.5□□□□□ -0.09
PDLIM5-208ENST00000504489 PGAP2Q9UHJ9 254 aa14.5□□□□□ -0.09
PDLIM5-208ENST00000504489 ERC2O15083 957 aa14.49□□□□□ -0.09
PDLIM5-208ENST00000504489 GLRX3O76003 335 aaKnown RBP14.49□□□□□ -0.09
PDLIM5-208ENST00000504489 POTEIP0CG38 1075 aa14.49□□□□□ -0.09
PDLIM5-208ENST00000504489 POTEJP0CG39 1038 aa14.49□□□□□ -0.09
PDLIM5-208ENST00000504489 CRKP46108 304 aa14.49□□□□□ -0.09
PDLIM5-208ENST00000504489 TTF1Q15361 905 aaPredicted RBP14.49□□□□□ -0.09
PDLIM5-208ENST00000504489 DLGAP5Q15398 846 aa14.49□□□□□ -0.09
PDLIM5-208ENST00000504489 CFAP100Q494V2 611 aa14.49□□□□□ -0.09
PDLIM5-208ENST00000504489 RBM46Q8TBY0 533 aaKnown RBP14.49□□□□□ -0.09
PDLIM5-208ENST00000504489 TEKT1Q969V4 418 aa14.49□□□□□ -0.09
PDLIM5-208ENST00000504489 PPP4R2Q9NY27 417 aa14.49□□□□□ -0.09
PDLIM5-208ENST00000504489 LRP2BPQ9P2M1 347 aa14.49□□□□□ -0.09
PDLIM5-208ENST00000504489 WNT10BO00744 389 aa14.48□□□□□ -0.09
PDLIM5-208ENST00000504489 PDE1AP54750 535 aa14.48□□□□□ -0.09
PDLIM5-208ENST00000504489 DZIP1Q86YF9 867 aaKnown RBP14.48□□□□□ -0.09
PDLIM5-208ENST00000504489 SLF2Q8IX21 1173 aa14.48□□□□□ -0.09
PDLIM5-208ENST00000504489 PI4K2BQ8TCG2 481 aa14.48□□□□□ -0.09
PDLIM5-208ENST00000504489 FAM163AQ96GL9 167 aaPredicted RBP14.48□□□□□ -0.09
PDLIM5-208ENST00000504489 ZDHHC15Q96MV8 337 aa14.48□□□□□ -0.09
PDLIM5-208ENST00000504489 ANTXR1Q9H6X2 564 aa14.48□□□□□ -0.09
PDLIM5-208ENST00000504489 PIH1D3Q9NQM4 214 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms