RNA–Protein interactions for RNA: ENST00000504003.1

ARHGEF28-206, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 539 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-206ENST00000504003 ECHDC1Q9NTX5 307 aa11.24□□□□□ -0.61
ARHGEF28-206ENST00000504003 GNL3LQ9NVN8 582 aaKnown RBP11.24□□□□□ -0.61
ARHGEF28-206ENST00000504003 MINPP1Q9UNW1 487 aa11.24□□□□□ -0.61
ARHGEF28-206ENST00000504003 LEMD3Q9Y2U8 911 aa11.24□□□□□ -0.61
ARHGEF28-206ENST00000504003 XDHP47989 1333 aa11.24□□□□□ -0.61
ARHGEF28-206ENST00000504003 GLRX3O76003 335 aaKnown RBP11.23□□□□□ -0.61
ARHGEF28-206ENST00000504003 ATP2B4P23634 1241 aa11.23□□□□□ -0.61
ARHGEF28-206ENST00000504003 OSBPL3Q9H4L5 887 aa11.23□□□□□ -0.61
ARHGEF28-206ENST00000504003 PIM2Q9P1W9 311 aa11.23□□□□□ -0.61
ARHGEF28-206ENST00000504003 ATP6V0A2Q9Y487 856 aa11.23□□□□□ -0.61
ARHGEF28-206ENST00000504003 KIF13BQ9NQT8 1826 aa11.23□□□□□ -0.61
ARHGEF28-206ENST00000504003 UQCRFS1P1P0C7P4 283 aa11.22□□□□□ -0.61
ARHGEF28-206ENST00000504003 PDE1AP54750 535 aa11.22□□□□□ -0.61
ARHGEF28-206ENST00000504003 TTC39AQ5SRH9 613 aa11.22□□□□□ -0.61
ARHGEF28-206ENST00000504003 CASC1Q6TDU7 716 aa11.22□□□□□ -0.61
ARHGEF28-206ENST00000504003 PLEKHM2Q8IWE5 1019 aa11.22□□□□□ -0.61
ARHGEF28-206ENST00000504003 SUPT20HQ8NEM7 779 aa11.22□□□□□ -0.61
ARHGEF28-206ENST00000504003 EAF2Q96CJ1 260 aaPredicted RBP11.22□□□□□ -0.61
ARHGEF28-206ENST00000504003 EYA3Q99504 573 aa11.22□□□□□ -0.61
ARHGEF28-206ENST00000504003 CCDC8Q9H0W5 538 aaPredicted RBP11.22□□□□□ -0.61
ARHGEF28-206ENST00000504003 STAP2Q9UGK3 403 aa11.22□□□□□ -0.61
ARHGEF28-206ENST00000504003 TSKSQ9UJT2 592 aa11.22□□□□□ -0.61
ARHGEF28-206ENST00000504003 GGA1Q9UJY5 639 aa11.22□□□□□ -0.61
ARHGEF28-206ENST00000504003 NSFL1CQ9UNZ2 370 aaKnown RBP11.22□□□□□ -0.61
ARHGEF28-206ENST00000504003 TAF1P21675 1872 aa11.21□□□□□ -0.61
ARHGEF28-206ENST00000504003 DLEC1Q9Y238 1755 aa11.21□□□□□ -0.61
ARHGEF28-206ENST00000504003 ZNF609O15014 1411 aa11.21□□□□□ -0.61
ARHGEF28-206ENST00000504003 ZNF804BA4D1E1 1349 aa11.21□□□□□ -0.61
ARHGEF28-206ENST00000504003 TAF5LO75529 589 aa11.21□□□□□ -0.61
ARHGEF28-206ENST00000504003 CHRNA5P30532 468 aa11.21□□□□□ -0.61
ARHGEF28-206ENST00000504003 TIMM10P62072 90 aa11.21□□□□□ -0.61
ARHGEF28-206ENST00000504003 LRRFIP1Q32MZ4 808 aaKnown RBP11.21□□□□□ -0.61
ARHGEF28-206ENST00000504003 DALRD3Q5D0E6 543 aaKnown RBP11.21□□□□□ -0.61
ARHGEF28-206ENST00000504003 PRPF40BQ6NWY9 871 aaKnown RBP11.21□□□□□ -0.61
ARHGEF28-206ENST00000504003 DPP8Q6V1X1 898 aaPredicted RBP11.21□□□□□ -0.61
ARHGEF28-206ENST00000504003 MPNDQ8N594 471 aa11.21□□□□□ -0.61
ARHGEF28-206ENST00000504003 VGLL2Q8N8G2 317 aa11.21□□□□□ -0.61
ARHGEF28-206ENST00000504003 HELBQ8NG08 1087 aaPredicted RBP11.21□□□□□ -0.61
ARHGEF28-206ENST00000504003 XAGE2Q96GT9 111 aa11.21□□□□□ -0.61
ARHGEF28-206ENST00000504003 PODXL2Q9NZ53 605 aa11.21□□□□□ -0.61
ARHGEF28-206ENST00000504003 C6orf229H3BNL8 230 aa11.2□□□□□ -0.62
ARHGEF28-206ENST00000504003 FRAT2O75474 233 aaPredicted RBP11.2□□□□□ -0.62
ARHGEF28-206ENST00000504003 DPEP1P16444 411 aa11.2□□□□□ -0.62
ARHGEF28-206ENST00000504003 ATP5JP18859 108 aa11.2□□□□□ -0.62
ARHGEF28-206ENST00000504003 BMP2KLQ5H9B9 411 aa11.2□□□□□ -0.62
ARHGEF28-206ENST00000504003 TTC22Q5TAA0 569 aa11.2□□□□□ -0.62
ARHGEF28-206ENST00000504003 ZNF804AQ7Z570 1209 aa11.2□□□□□ -0.62
ARHGEF28-206ENST00000504003 C16orf71Q8IYS4 520 aaPredicted RBP11.2□□□□□ -0.62
ARHGEF28-206ENST00000504003 RTKN2Q8IZC4 609 aa11.2□□□□□ -0.62
ARHGEF28-206ENST00000504003 CNTROBQ8N137 903 aa11.2□□□□□ -0.62
ARHGEF28-206ENST00000504003 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.2□□□□□ -0.62
ARHGEF28-206ENST00000504003 ARIH1Q9Y4X5 557 aaPredicted RBP11.2□□□□□ -0.62
ARHGEF28-206ENST00000504003 CACNA1SQ13698 1873 aa11.2□□□□□ -0.62
ARHGEF28-206ENST00000504003 COL11A2P13942 1736 aaPredicted RBP11.2□□□□□ -0.62
ARHGEF28-206ENST00000504003 A0A0G2JLW4 131 aa11.19□□□□□ -0.62
ARHGEF28-206ENST00000504003 UFL1O94874 794 aa11.19□□□□□ -0.62
ARHGEF28-206ENST00000504003 FGFR2P21802 821 aa11.19□□□□□ -0.62
ARHGEF28-206ENST00000504003 YY1P25490 414 aa11.19□□□□□ -0.62
ARHGEF28-206ENST00000504003 CCDC93Q567U6 631 aa11.19□□□□□ -0.62
ARHGEF28-206ENST00000504003 TICAM2Q86XR7 235 aa11.19□□□□□ -0.62
ARHGEF28-206ENST00000504003 ZNF512BQ96KM6 892 aaPredicted RBP11.19□□□□□ -0.62
ARHGEF28-206ENST00000504003 DBNDD2Q9BQY9 259 aa11.19□□□□□ -0.62
ARHGEF28-206ENST00000504003 ZC3H12CQ9C0D7 883 aaKnown RBP11.19□□□□□ -0.62
ARHGEF28-206ENST00000504003 DBNLQ9UJU6 430 aaKnown RBP11.19□□□□□ -0.62
ARHGEF28-206ENST00000504003 LRRC37AA6NMS7 1700 aa11.18□□□□□ -0.62
ARHGEF28-206ENST00000504003 ARAP2Q8WZ64 1704 aa11.18□□□□□ -0.62
ARHGEF28-206ENST00000504003 HIP1O00291 1037 aa11.18□□□□□ -0.62
ARHGEF28-206ENST00000504003 SEMA3EO15041 775 aa11.18□□□□□ -0.62
ARHGEF28-206ENST00000504003 HIBADHP31937 336 aaKnown RBP11.18□□□□□ -0.62
ARHGEF28-206ENST00000504003 PRSS12P56730 875 aa11.18□□□□□ -0.62
ARHGEF28-206ENST00000504003 PPP4CP60510 307 aa11.18□□□□□ -0.62
ARHGEF28-206ENST00000504003 TTF1Q15361 905 aaPredicted RBP11.18□□□□□ -0.62
ARHGEF28-206ENST00000504003 A0A1B0GUL6 1792 aa11.18□□□□□ -0.62
ARHGEF28-206ENST00000504003 SALL3Q9BXA9 1300 aa11.17□□□□□ -0.62
ARHGEF28-206ENST00000504003 GRXCR2A6NFK2 248 aa11.17□□□□□ -0.62
ARHGEF28-206ENST00000504003 GPSM2P81274 684 aa11.17□□□□□ -0.62
ARHGEF28-206ENST00000504003 CCDC102BQ68D86 513 aa11.17□□□□□ -0.62
ARHGEF28-206ENST00000504003 C15orf52Q6ZUT6 534 aaKnown RBP11.17□□□□□ -0.62
ARHGEF28-206ENST00000504003 PAXIP1Q6ZW49 1069 aaPredicted RBP11.17□□□□□ -0.62
ARHGEF28-206ENST00000504003 RILPL2Q969X0 211 aa11.17□□□□□ -0.62
ARHGEF28-206ENST00000504003 EVI5LQ96CN4 794 aa11.17□□□□□ -0.62
ARHGEF28-206ENST00000504003 VPS33BQ9H267 617 aa11.17□□□□□ -0.62
ARHGEF28-206ENST00000504003 DENND2AQ9ULE3 1009 aa11.17□□□□□ -0.62
ARHGEF28-206ENST00000504003 MED23Q9ULK4 1368 aa11.16□□□□□ -0.62
ARHGEF28-206ENST00000504003 AK9Q5TCS8 1911 aa11.16□□□□□ -0.62
ARHGEF28-206ENST00000504003 C21orf2O43822 256 aa11.16□□□□□ -0.62
ARHGEF28-206ENST00000504003 IGSF3O75054 1194 aa11.16□□□□□ -0.62
ARHGEF28-206ENST00000504003 WASHC4Q2M389 1173 aa11.16□□□□□ -0.62
ARHGEF28-206ENST00000504003 ZSCAN25Q6NSZ9 544 aa11.16□□□□□ -0.62
ARHGEF28-206ENST00000504003 ZGPATQ8N5A5 531 aaKnown RBP11.16□□□□□ -0.62
ARHGEF28-206ENST00000504003 TBC1D16Q8TBP0 767 aa11.16□□□□□ -0.62
ARHGEF28-206ENST00000504003 OTUD7AQ8TE49 926 aaPredicted RBP11.16□□□□□ -0.62
ARHGEF28-206ENST00000504003 DNAJC2Q99543 621 aaKnown RBP11.16□□□□□ -0.62
ARHGEF28-206ENST00000504003 HAUS7Q99871 368 aa11.16□□□□□ -0.62
ARHGEF28-206ENST00000504003 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.16□□□□□ -0.62
ARHGEF28-206ENST00000504003 BOLA2Q9H3K6 86 aa11.16□□□□□ -0.62
ARHGEF28-206ENST00000504003 TLR7Q9NYK1 1049 aaKnown RBP11.16□□□□□ -0.62
ARHGEF28-206ENST00000504003 SLX4Q8IY92 1834 aa11.16□□□□□ -0.62
ARHGEF28-206ENST00000504003 KCNA3P22001 575 aa11.15□□□□□ -0.62
ARHGEF28-206ENST00000504003 ARID4AP29374 1257 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms