RNA–Protein interactions for RNA: ENST00000502664.5

GYPB-202, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 521 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-202ENST00000502664 COPS6Q7L5N1 327 aa6.73□□□□□ -1.33
GYPB-202ENST00000502664 ANKLE1Q8NAG6 615 aa6.73□□□□□ -1.33
GYPB-202ENST00000502664 TBC1D16Q8TBP0 767 aa6.73□□□□□ -1.33
GYPB-202ENST00000502664 XAGE3Q8WTP9 111 aa6.73□□□□□ -1.33
GYPB-202ENST00000502664 GCC1Q96CN9 775 aa6.73□□□□□ -1.33
GYPB-202ENST00000502664 PCGF6Q9BYE7 350 aa6.73□□□□□ -1.33
GYPB-202ENST00000502664 STK17AQ9UEE5 414 aa6.73□□□□□ -1.33
GYPB-202ENST00000502664 TRMT112Q9UI30 125 aaKnown RBP6.73□□□□□ -1.33
GYPB-202ENST00000502664 SZT2Q5T011 3432 aa6.73□□□□□ -1.33
GYPB-202ENST00000502664 SPDYE16A6NNV3 312 aaPredicted RBP6.72□□□□□ -1.33
GYPB-202ENST00000502664 FKTNO75072 461 aa6.72□□□□□ -1.33
GYPB-202ENST00000502664 WFS1O76024 890 aa6.72□□□□□ -1.33
GYPB-202ENST00000502664 RPS12P25398 132 aaKnown RBP6.72□□□□□ -1.33
GYPB-202ENST00000502664 PPP2R1AP30153 589 aa6.72□□□□□ -1.33
GYPB-202ENST00000502664 ZNF280AP59817 542 aaPredicted RBP6.72□□□□□ -1.33
GYPB-202ENST00000502664 PTPN12Q05209 780 aaKnown RBP6.72□□□□□ -1.33
GYPB-202ENST00000502664 TCIRG1Q13488 830 aa6.72□□□□□ -1.33
GYPB-202ENST00000502664 PRKG1Q13976 671 aa6.72□□□□□ -1.33
GYPB-202ENST00000502664 KRT24Q2M2I5 525 aa6.72□□□□□ -1.33
GYPB-202ENST00000502664 NBPF9Q3BBW0 867 aa6.72□□□□□ -1.33
GYPB-202ENST00000502664 BLOC1S3Q6QNY0 202 aa6.72□□□□□ -1.33
GYPB-202ENST00000502664 FAM89AQ96GI7 184 aa6.72□□□□□ -1.33
GYPB-202ENST00000502664 GMLQ99445 158 aa6.72□□□□□ -1.33
GYPB-202ENST00000502664 CDHR5Q9HBB8 845 aa6.72□□□□□ -1.33
GYPB-202ENST00000502664 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.72□□□□□ -1.33
GYPB-202ENST00000502664 RBM27Q9P2N5 1060 aaKnown RBP6.72□□□□□ -1.33
GYPB-202ENST00000502664 TRIM17Q9Y577 477 aa6.72□□□□□ -1.33
GYPB-202ENST00000502664 PCDHB3Q9Y5E6 796 aa6.72□□□□□ -1.33
GYPB-202ENST00000502664 SH3TC1Q8TE82 1336 aa6.72□□□□□ -1.33
GYPB-202ENST00000502664 ATP5J2-PTCD1G3V325 749 aa6.71□□□□□ -1.34
GYPB-202ENST00000502664 TLL1O43897 1013 aa6.71□□□□□ -1.34
GYPB-202ENST00000502664 RSBN1LQ6PCB5 846 aaPredicted RBP6.71□□□□□ -1.34
GYPB-202ENST00000502664 OTOP1Q7RTM1 612 aa6.71□□□□□ -1.34
GYPB-202ENST00000502664 TTC13Q8NBP0 860 aa6.71□□□□□ -1.34
GYPB-202ENST00000502664 PLEKHF1Q96S99 279 aa6.71□□□□□ -1.34
GYPB-202ENST00000502664 MYOZ2Q9NPC6 264 aa6.71□□□□□ -1.34
GYPB-202ENST00000502664 SEC31BQ9NQW1 1179 aa6.71□□□□□ -1.34
GYPB-202ENST00000502664 UFL1O94874 794 aa6.7□□□□□ -1.34
GYPB-202ENST00000502664 TTLL12Q14166 644 aaPredicted RBP6.7□□□□□ -1.34
GYPB-202ENST00000502664 SF3B3Q15393 1217 aaKnown RBP6.7□□□□□ -1.34
GYPB-202ENST00000502664 NOM1Q5C9Z4 860 aaKnown RBP6.7□□□□□ -1.34
GYPB-202ENST00000502664 PNISRQ8TF01 805 aaKnown RBP6.7□□□□□ -1.34
GYPB-202ENST00000502664 JARID2Q92833 1246 aaPredicted RBP6.7□□□□□ -1.34
GYPB-202ENST00000502664 CFAP53Q96M91 514 aa6.7□□□□□ -1.34
GYPB-202ENST00000502664 DACH1Q9UI36 760 aa6.7□□□□□ -1.34
GYPB-202ENST00000502664 NUDCQ9Y266 331 aa6.7□□□□□ -1.34
GYPB-202ENST00000502664 ZNF646O15015 1829 aaPredicted RBP6.7□□□□□ -1.34
GYPB-202ENST00000502664 ERBB4Q15303 1308 aa6.7□□□□□ -1.34
GYPB-202ENST00000502664 GRXCR2A6NFK2 248 aa6.69□□□□□ -1.34
GYPB-202ENST00000502664 IGF2BP3O00425 579 aaKnown RBP eCLIP6.69□□□□□ -1.34
GYPB-202ENST00000502664 WNT10BO00744 389 aa6.69□□□□□ -1.34
GYPB-202ENST00000502664 WIPF1O43516 503 aa6.69□□□□□ -1.34
GYPB-202ENST00000502664 SASH1O94885 1247 aa6.69□□□□□ -1.34
GYPB-202ENST00000502664 S1PR4O95977 384 aa6.69□□□□□ -1.34
GYPB-202ENST00000502664 MYCP01106 439 aaPredicted RBP6.69□□□□□ -1.34
GYPB-202ENST00000502664 RPS8P62241 208 aaKnown RBP6.69□□□□□ -1.34
GYPB-202ENST00000502664 FKBP1BP68106 108 aa6.69□□□□□ -1.34
GYPB-202ENST00000502664 NFX1Q12986 1120 aaKnown RBP6.69□□□□□ -1.34
GYPB-202ENST00000502664 CD99L2Q8TCZ2 262 aa6.69□□□□□ -1.34
GYPB-202ENST00000502664 CLMNQ96JQ2 1002 aa6.69□□□□□ -1.34
GYPB-202ENST00000502664 CCDC85AQ96PX6 553 aaPredicted RBP6.69□□□□□ -1.34
GYPB-202ENST00000502664 ISCA1Q9BUE6 129 aa6.69□□□□□ -1.34
GYPB-202ENST00000502664 PRR14Q9BWN1 585 aa6.69□□□□□ -1.34
GYPB-202ENST00000502664 CFHR5Q9BXR6 569 aa6.69□□□□□ -1.34
GYPB-202ENST00000502664 ZC3H12CQ9C0D7 883 aaKnown RBP6.69□□□□□ -1.34
GYPB-202ENST00000502664 TSPYL4Q9UJ04 414 aa6.69□□□□□ -1.34
GYPB-202ENST00000502664 PTPN22Q9Y2R2 807 aa6.69□□□□□ -1.34
GYPB-202ENST00000502664 PCDHAC2Q9Y5I4 1007 aa6.69□□□□□ -1.34
GYPB-202ENST00000502664 RBBP6Q7Z6E9 1792 aaKnown RBP6.69□□□□□ -1.34
GYPB-202ENST00000502664 ZNF609O15014 1411 aa6.68□□□□□ -1.34
GYPB-202ENST00000502664 H0YGN5 161 aa6.68□□□□□ -1.34
GYPB-202ENST00000502664 DLL1O00548 723 aa6.68□□□□□ -1.34
GYPB-202ENST00000502664 USP17L8P0C7I0 530 aa6.68□□□□□ -1.34
GYPB-202ENST00000502664 GJA5P36382 358 aa6.68□□□□□ -1.34
GYPB-202ENST00000502664 TRIM26Q12899 539 aaPredicted RBP6.68□□□□□ -1.34
GYPB-202ENST00000502664 NFE2L2Q16236 605 aa6.68□□□□□ -1.34
GYPB-202ENST00000502664 LDLRAD1Q5T700 205 aa6.68□□□□□ -1.34
GYPB-202ENST00000502664 TMC4Q7Z404 712 aa6.68□□□□□ -1.34
GYPB-202ENST00000502664 CRIPAKQ8N1N5 446 aa6.68□□□□□ -1.34
GYPB-202ENST00000502664 AGBL3Q8NEM8 1001 aa6.68□□□□□ -1.34
GYPB-202ENST00000502664 EYA3Q99504 573 aa6.68□□□□□ -1.34
GYPB-202ENST00000502664 PODXL2Q9NZ53 605 aa6.68□□□□□ -1.34
GYPB-202ENST00000502664 CHPF2Q9P2E5 772 aa6.68□□□□□ -1.34
GYPB-202ENST00000502664 PSME4Q14997 1843 aa6.68□□□□□ -1.34
GYPB-202ENST00000502664 SSC5DA1L4H1 1573 aa6.68□□□□□ -1.34
GYPB-202ENST00000502664 PITPNM2Q9BZ72 1349 aa6.68□□□□□ -1.34
GYPB-202ENST00000502664 LOC100996750A0A140TA64 210 aa6.67□□□□□ -1.34
GYPB-202ENST00000502664 USP17L3A6NCW0 530 aa6.67□□□□□ -1.34
GYPB-202ENST00000502664 USP17L4A6NCW7 530 aa6.67□□□□□ -1.34
GYPB-202ENST00000502664 IRS4O14654 1257 aaPredicted RBP6.67□□□□□ -1.34
GYPB-202ENST00000502664 OSBPP22059 807 aa6.67□□□□□ -1.34
GYPB-202ENST00000502664 SREBF2Q12772 1141 aa6.67□□□□□ -1.34
GYPB-202ENST00000502664 CRHR2Q13324 411 aa6.67□□□□□ -1.34
GYPB-202ENST00000502664 HSP90AB3PQ58FF7 597 aa6.67□□□□□ -1.34
GYPB-202ENST00000502664 PLA2G2CQ5R387 149 aa6.67□□□□□ -1.34
GYPB-202ENST00000502664 PADI6Q6TGC4 694 aa6.67□□□□□ -1.34
GYPB-202ENST00000502664 USP17L1Q7RTZ2 530 aa6.67□□□□□ -1.34
GYPB-202ENST00000502664 TXNRD3Q86VQ6 643 aa6.67□□□□□ -1.34
GYPB-202ENST00000502664 ARMC5Q96C12 935 aa6.67□□□□□ -1.34
GYPB-202ENST00000502664 PTPN18Q99952 460 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms