RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 TRIM27P14373 513 aa10.57□□□□□ -0.72
HMGXB4-207ENST00000498212 BCAMP50895 628 aa10.57□□□□□ -0.72
HMGXB4-207ENST00000498212 KIF23Q02241 960 aaPredicted RBP10.57□□□□□ -0.72
HMGXB4-207ENST00000498212 CHAF1AQ13111 956 aaPredicted RBP10.57□□□□□ -0.72
HMGXB4-207ENST00000498212 ATF7IPQ6VMQ6 1270 aa10.57□□□□□ -0.72
HMGXB4-207ENST00000498212 ATG9AQ7Z3C6 839 aa10.57□□□□□ -0.72
HMGXB4-207ENST00000498212 RASAL3Q86YV0 1011 aa10.57□□□□□ -0.72
HMGXB4-207ENST00000498212 TBC1D22AQ8WUA7 517 aa10.57□□□□□ -0.72
HMGXB4-207ENST00000498212 PRMT6Q96LA8 375 aaPredicted RBP10.57□□□□□ -0.72
HMGXB4-207ENST00000498212 SIL1Q9H173 461 aa10.57□□□□□ -0.72
HMGXB4-207ENST00000498212 DEFB129Q9H1M3 183 aa10.57□□□□□ -0.72
HMGXB4-207ENST00000498212 SERPINA10Q9UK55 444 aa10.57□□□□□ -0.72
HMGXB4-207ENST00000498212 PPP2R3BQ9Y5P8 575 aa10.57□□□□□ -0.72
HMGXB4-207ENST00000498212 AK9Q5TCS8 1911 aa10.56□□□□□ -0.72
HMGXB4-207ENST00000498212 MYH2Q9UKX2 1941 aa10.56□□□□□ -0.72
HMGXB4-207ENST00000498212 PRKG1Q13976 671 aa10.56□□□□□ -0.72
HMGXB4-207ENST00000498212 ARMC9Q7Z3E5 817 aa10.56□□□□□ -0.72
HMGXB4-207ENST00000498212 LPIN2Q92539 896 aa10.56□□□□□ -0.72
HMGXB4-207ENST00000498212 VEZTQ9HBM0 779 aa10.56□□□□□ -0.72
HMGXB4-207ENST00000498212 CEP126Q9P2H0 1117 aa10.56□□□□□ -0.72
HMGXB4-207ENST00000498212 HAX1O00165 279 aa10.55□□□□□ -0.72
HMGXB4-207ENST00000498212 IL15P40933 162 aaPredicted RBP10.55□□□□□ -0.72
HMGXB4-207ENST00000498212 CRKP46108 304 aa10.55□□□□□ -0.72
HMGXB4-207ENST00000498212 TNFAIP1Q13829 316 aa10.55□□□□□ -0.72
HMGXB4-207ENST00000498212 GRIK5Q16478 980 aa10.55□□□□□ -0.72
HMGXB4-207ENST00000498212 ATP2B3Q16720 1220 aa10.55□□□□□ -0.72
HMGXB4-207ENST00000498212 ZKSCAN2Q63HK3 967 aa10.55□□□□□ -0.72
HMGXB4-207ENST00000498212 CLUAP1Q96AJ1 413 aa10.55□□□□□ -0.72
HMGXB4-207ENST00000498212 CSRNP1Q96S65 589 aa10.55□□□□□ -0.72
HMGXB4-207ENST00000498212 TDRD3Q9H7E2 651 aaKnown RBP10.55□□□□□ -0.72
HMGXB4-207ENST00000498212 SAGE1Q9NXZ1 904 aa10.55□□□□□ -0.72
HMGXB4-207ENST00000498212 ANGEL1Q9UNK9 670 aaKnown RBP10.55□□□□□ -0.72
HMGXB4-207ENST00000498212 PA2G4Q9UQ80 394 aaKnown RBP10.55□□□□□ -0.72
HMGXB4-207ENST00000498212 TNNQ9UQP3 1299 aa10.55□□□□□ -0.72
HMGXB4-207ENST00000498212 SSC5DA1L4H1 1573 aa10.55□□□□□ -0.72
HMGXB4-207ENST00000498212 AOX1Q06278 1338 aa10.55□□□□□ -0.72
HMGXB4-207ENST00000498212 SRGAP3O43295 1099 aa10.54□□□□□ -0.72
HMGXB4-207ENST00000498212 HDLBPQ00341 1268 aaKnown RBP10.54□□□□□ -0.72
HMGXB4-207ENST00000498212 SUPT20HL1Q3ZLR7 823 aa10.54□□□□□ -0.72
HMGXB4-207ENST00000498212 SPDYE2Q495Y8 402 aa10.54□□□□□ -0.72
HMGXB4-207ENST00000498212 DZIP1LQ8IYY4 767 aaKnown RBP10.54□□□□□ -0.72
HMGXB4-207ENST00000498212 COPRSQ9NQ92 184 aa10.54□□□□□ -0.72
HMGXB4-207ENST00000498212 ZNF70Q9UC06 446 aaPredicted RBP10.54□□□□□ -0.72
HMGXB4-207ENST00000498212 MAST3O60307 1309 aa10.54□□□□□ -0.72
HMGXB4-207ENST00000498212 ZBED9Q6R2W3 1325 aa10.54□□□□□ -0.72
HMGXB4-207ENST00000498212 PPP1R12BO60237 982 aaPredicted RBP10.53□□□□□ -0.72
HMGXB4-207ENST00000498212 TRPA1O75762 1119 aa10.53□□□□□ -0.72
HMGXB4-207ENST00000498212 MTX1Q13505 466 aa10.53□□□□□ -0.72
HMGXB4-207ENST00000498212 RASA3Q14644 834 aa10.53□□□□□ -0.72
HMGXB4-207ENST00000498212 MAP3K11Q16584 847 aa10.53□□□□□ -0.72
HMGXB4-207ENST00000498212 LDLRAD1Q5T700 205 aa10.53□□□□□ -0.72
HMGXB4-207ENST00000498212 WDR66Q8TBY9 1149 aa10.53□□□□□ -0.72
HMGXB4-207ENST00000498212 TEKT1Q969V4 418 aa10.53□□□□□ -0.72
HMGXB4-207ENST00000498212 RNF186Q9NXI6 227 aa10.53□□□□□ -0.72
HMGXB4-207ENST00000498212 FZD1Q9UP38 647 aa10.53□□□□□ -0.72
HMGXB4-207ENST00000498212 SUGT1Q9Y2Z0 365 aa10.53□□□□□ -0.72
HMGXB4-207ENST00000498212 TCP10L2B9ZVM9 353 aa10.52□□□□□ -0.73
HMGXB4-207ENST00000498212 GNAI2P04899 355 aa10.52□□□□□ -0.73
HMGXB4-207ENST00000498212 TNNI2P48788 182 aa10.52□□□□□ -0.73
HMGXB4-207ENST00000498212 NBPF12Q5TAG4 269 aaPredicted RBP10.52□□□□□ -0.73
HMGXB4-207ENST00000498212 TMEM57Q8N5G2 664 aa10.52□□□□□ -0.73
HMGXB4-207ENST00000498212 ZDHHC15Q96MV8 337 aa10.52□□□□□ -0.73
HMGXB4-207ENST00000498212 MRIQ9BWK5 157 aa10.52□□□□□ -0.73
HMGXB4-207ENST00000498212 GNL3LQ9NVN8 582 aaKnown RBP10.52□□□□□ -0.73
HMGXB4-207ENST00000498212 UNCXA6NJT0 531 aa10.51□□□□□ -0.73
HMGXB4-207ENST00000498212 SEMA3EO15041 775 aa10.51□□□□□ -0.73
HMGXB4-207ENST00000498212 PHKA1P46020 1223 aa10.51□□□□□ -0.73
HMGXB4-207ENST00000498212 IREB2P48200 963 aaKnown RBP10.51□□□□□ -0.73
HMGXB4-207ENST00000498212 MKRN3Q13064 507 aaKnown RBP10.51□□□□□ -0.73
HMGXB4-207ENST00000498212 FTSJ3Q8IY81 847 aaKnown RBP10.51□□□□□ -0.73
HMGXB4-207ENST00000498212 SLC10A4Q96EP9 437 aa10.51□□□□□ -0.73
HMGXB4-207ENST00000498212 TMOD2Q9NZR1 351 aa10.51□□□□□ -0.73
HMGXB4-207ENST00000498212 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.51□□□□□ -0.73
HMGXB4-207ENST00000498212 DENND2AQ9ULE3 1009 aa10.51□□□□□ -0.73
HMGXB4-207ENST00000498212 AKAP2Q9Y2D5 859 aa10.51□□□□□ -0.73
HMGXB4-207ENST00000498212 DOCK2Q92608 1830 aa10.51□□□□□ -0.73
HMGXB4-207ENST00000498212 PNMA6EA0A0J9YXQ4 647 aa10.5□□□□□ -0.73
HMGXB4-207ENST00000498212 USP2O75604 605 aaPredicted RBP10.5□□□□□ -0.73
HMGXB4-207ENST00000498212 ADORA1P30542 326 aa10.5□□□□□ -0.73
HMGXB4-207ENST00000498212 TM4SF4P48230 202 aa10.5□□□□□ -0.73
HMGXB4-207ENST00000498212 TIMM10P62072 90 aa10.5□□□□□ -0.73
HMGXB4-207ENST00000498212 SREBF2Q12772 1141 aa10.5□□□□□ -0.73
HMGXB4-207ENST00000498212 TFCP2Q12800 502 aa10.5□□□□□ -0.73
HMGXB4-207ENST00000498212 SPRYD7Q5W111 196 aa10.5□□□□□ -0.73
HMGXB4-207ENST00000498212 CCDC102BQ68D86 513 aa10.5□□□□□ -0.73
HMGXB4-207ENST00000498212 HHIPL2Q6UWX4 724 aa10.5□□□□□ -0.73
HMGXB4-207ENST00000498212 ABHD8Q96I13 439 aa10.5□□□□□ -0.73
HMGXB4-207ENST00000498212 TEPSINQ96N21 525 aa10.5□□□□□ -0.73
HMGXB4-207ENST00000498212 TMEM39BQ9GZU3 492 aa10.5□□□□□ -0.73
HMGXB4-207ENST00000498212 SALL1Q9NSC2 1324 aa10.5□□□□□ -0.73
HMGXB4-207ENST00000498212 MYO5AQ9Y4I1 1855 aaKnown RBP10.49□□□□□ -0.73
HMGXB4-207ENST00000498212 A0A1B0GUL7 405 aa10.49□□□□□ -0.73
HMGXB4-207ENST00000498212 LDHBP07195 334 aaKnown RBP10.49□□□□□ -0.73
HMGXB4-207ENST00000498212 ZBTB48P10074 688 aaPredicted RBP10.49□□□□□ -0.73
HMGXB4-207ENST00000498212 PRDX5P30044 214 aa10.49□□□□□ -0.73
HMGXB4-207ENST00000498212 CACNB3P54284 484 aa10.49□□□□□ -0.73
HMGXB4-207ENST00000498212 EVX2Q03828 476 aa10.49□□□□□ -0.73
HMGXB4-207ENST00000498212 DGKZQ13574 1117 aa10.49□□□□□ -0.73
HMGXB4-207ENST00000498212 APOBEC3HQ6NTF7 200 aaKnown RBP10.49□□□□□ -0.73
HMGXB4-207ENST00000498212 ITPRIPQ8IWB1 547 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms