RNA–Protein interactions for RNA: ENST00000498015.2

NEB-217, Transcript of nebulin, humanhuman

TSL 5

Gene NEB, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-217ENST00000498015 SERPINA10Q9UK55 444 aa9.1□□□□□ -0.95
NEB-217ENST00000498015 NOB1Q9ULX3 412 aaKnown RBP9.1□□□□□ -0.95
NEB-217ENST00000498015 PPP2R3BQ9Y5P8 575 aa9.1□□□□□ -0.95
NEB-217ENST00000498015 COL1A1P02452 1464 aaPredicted RBP9.09□□□□□ -0.95
NEB-217ENST00000498015 PPP1R12BO60237 982 aaPredicted RBP9.09□□□□□ -0.95
NEB-217ENST00000498015 TBC1D8O95759 1140 aa9.09□□□□□ -0.95
NEB-217ENST00000498015 UBTFL1P0CB47 393 aaPredicted RBP9.09□□□□□ -0.95
NEB-217ENST00000498015 TM4SF4P48230 202 aa9.09□□□□□ -0.95
NEB-217ENST00000498015 BCAMP50895 628 aa9.09□□□□□ -0.95
NEB-217ENST00000498015 RASA3Q14644 834 aa9.09□□□□□ -0.95
NEB-217ENST00000498015 GRIK5Q16478 980 aa9.09□□□□□ -0.95
NEB-217ENST00000498015 NBPF12Q5TAG4 269 aaPredicted RBP9.09□□□□□ -0.95
NEB-217ENST00000498015 SPRYD7Q5W111 196 aa9.09□□□□□ -0.95
NEB-217ENST00000498015 POTEHQ6S545 545 aa9.09□□□□□ -0.95
NEB-217ENST00000498015 VGLL2Q8N8G2 317 aa9.09□□□□□ -0.95
NEB-217ENST00000498015 ARHGAP45Q92619 1136 aa9.09□□□□□ -0.95
NEB-217ENST00000498015 TDRD3Q9H7E2 651 aaKnown RBP9.09□□□□□ -0.95
NEB-217ENST00000498015 EYA2O00167 538 aa9.08□□□□□ -0.96
NEB-217ENST00000498015 IFIT1P09914 478 aaKnown RBP9.08□□□□□ -0.96
NEB-217ENST00000498015 CRKP46108 304 aa9.08□□□□□ -0.96
NEB-217ENST00000498015 RFX5P48382 616 aaPredicted RBP9.08□□□□□ -0.96
NEB-217ENST00000498015 RARSP54136 660 aaKnown RBP9.08□□□□□ -0.96
NEB-217ENST00000498015 SREBF2Q12772 1141 aa9.08□□□□□ -0.96
NEB-217ENST00000498015 TNFAIP1Q13829 316 aa9.08□□□□□ -0.96
NEB-217ENST00000498015 PUM3Q15397 648 aaKnown RBP9.08□□□□□ -0.96
NEB-217ENST00000498015 MAP3K11Q16584 847 aa9.08□□□□□ -0.96
NEB-217ENST00000498015 SPDYE2Q495Y8 402 aa9.08□□□□□ -0.96
NEB-217ENST00000498015 CTU1Q7Z7A3 348 aaKnown RBP9.08□□□□□ -0.96
NEB-217ENST00000498015 DZIP1LQ8IYY4 767 aaKnown RBP9.08□□□□□ -0.96
NEB-217ENST00000498015 TBC1D22AQ8WUA7 517 aa9.08□□□□□ -0.96
NEB-217ENST00000498015 CLMNQ96JQ2 1002 aa9.08□□□□□ -0.96
NEB-217ENST00000498015 API5Q9BZZ5 524 aaKnown RBP9.08□□□□□ -0.96
NEB-217ENST00000498015 ECM29Q5VYK3 1845 aa9.08□□□□□ -0.96
NEB-217ENST00000498015 SSC5DA1L4H1 1573 aa9.07□□□□□ -0.96
NEB-217ENST00000498015 TCP10L2B9ZVM9 353 aa9.07□□□□□ -0.96
NEB-217ENST00000498015 USP2O75604 605 aaPredicted RBP9.07□□□□□ -0.96
NEB-217ENST00000498015 SLC5A1P13866 664 aa9.07□□□□□ -0.96
NEB-217ENST00000498015 FGFR2P21802 821 aa9.07□□□□□ -0.96
NEB-217ENST00000498015 IREB2P48200 963 aaKnown RBP9.07□□□□□ -0.96
NEB-217ENST00000498015 CENPQQ7L2Z9 268 aaPredicted RBP9.07□□□□□ -0.96
NEB-217ENST00000498015 ZNF296Q8WUU4 475 aaPredicted RBP9.07□□□□□ -0.96
NEB-217ENST00000498015 SIL1Q9H173 461 aa9.07□□□□□ -0.96
NEB-217ENST00000498015 MANSC4A6NHS7 340 aaPredicted RBP9.06□□□□□ -0.96
NEB-217ENST00000498015 UNCXA6NJT0 531 aa9.06□□□□□ -0.96
NEB-217ENST00000498015 TNNI2P48788 182 aa9.06□□□□□ -0.96
NEB-217ENST00000498015 HDLBPQ00341 1268 aaKnown RBP9.06□□□□□ -0.96
NEB-217ENST00000498015 MLLT1Q03111 559 aaPredicted RBP9.06□□□□□ -0.96
NEB-217ENST00000498015 ATG9AQ7Z3C6 839 aa9.06□□□□□ -0.96
NEB-217ENST00000498015 CDAN1Q8IWY9 1227 aa9.06□□□□□ -0.96
NEB-217ENST00000498015 TEKT1Q969V4 418 aa9.06□□□□□ -0.96
NEB-217ENST00000498015 WNK4Q96J92 1243 aa9.06□□□□□ -0.96
NEB-217ENST00000498015 TMEM39BQ9GZU3 492 aa9.06□□□□□ -0.96
NEB-217ENST00000498015 R3HDMLQ9H3Y0 253 aa9.06□□□□□ -0.96
NEB-217ENST00000498015 CEP126Q9P2H0 1117 aa9.06□□□□□ -0.96
NEB-217ENST00000498015 HDAC5Q9UQL6 1122 aa9.06□□□□□ -0.96
NEB-217ENST00000498015 LRRFIP2Q9Y608 721 aaKnown RBP9.06□□□□□ -0.96
NEB-217ENST00000498015 KIF16BQ96L93 1317 aa9.05□□□□□ -0.96
NEB-217ENST00000498015 PDE4DIPQ5VU43 2346 aa9.05□□□□□ -0.96
NEB-217ENST00000498015 GPR25O00155 361 aa9.05□□□□□ -0.96
NEB-217ENST00000498015 ZBTB48P10074 688 aaPredicted RBP9.05□□□□□ -0.96
NEB-217ENST00000498015 RGS19P49795 217 aa9.05□□□□□ -0.96
NEB-217ENST00000498015 CACNB3P54284 484 aa9.05□□□□□ -0.96
NEB-217ENST00000498015 INHBEP58166 350 aa9.05□□□□□ -0.96
NEB-217ENST00000498015 ATP2B3Q16720 1220 aa9.05□□□□□ -0.96
NEB-217ENST00000498015 IFNL1Q8IU54 200 aa9.05□□□□□ -0.96
NEB-217ENST00000498015 ANKRD13AQ8IZ07 590 aa9.05□□□□□ -0.96
NEB-217ENST00000498015 LPIN2Q92539 896 aa9.05□□□□□ -0.96
NEB-217ENST00000498015 TEPSINQ96N21 525 aa9.05□□□□□ -0.96
NEB-217ENST00000498015 ELP3Q9H9T3 547 aa9.05□□□□□ -0.96
NEB-217ENST00000498015 TSHZ2Q9NRE2 1034 aa9.05□□□□□ -0.96
NEB-217ENST00000498015 PA2G4Q9UQ80 394 aaKnown RBP9.05□□□□□ -0.96
NEB-217ENST00000498015 FKTNO75072 461 aa9.04□□□□□ -0.96
NEB-217ENST00000498015 CIAO1O76071 339 aa9.04□□□□□ -0.96
NEB-217ENST00000498015 ALDH1A1P00352 501 aa9.04□□□□□ -0.96
NEB-217ENST00000498015 GJA5P36382 358 aa9.04□□□□□ -0.96
NEB-217ENST00000498015 APOBEC3HQ6NTF7 200 aaKnown RBP9.04□□□□□ -0.96
NEB-217ENST00000498015 EXOC6Q8TAG9 804 aa9.04□□□□□ -0.96
NEB-217ENST00000498015 WDR66Q8TBY9 1149 aa9.04□□□□□ -0.96
NEB-217ENST00000498015 ZDHHC15Q96MV8 337 aa9.04□□□□□ -0.96
NEB-217ENST00000498015 MEIS3Q99687 375 aa9.04□□□□□ -0.96
NEB-217ENST00000498015 MRIQ9BWK5 157 aa9.04□□□□□ -0.96
NEB-217ENST00000498015 GNL3LQ9NVN8 582 aaKnown RBP9.04□□□□□ -0.96
NEB-217ENST00000498015 TMOD2Q9NZR1 351 aa9.04□□□□□ -0.96
NEB-217ENST00000498015 FBXO3Q9UK99 471 aa9.04□□□□□ -0.96
NEB-217ENST00000498015 SUGT1Q9Y2Z0 365 aa9.04□□□□□ -0.96
NEB-217ENST00000498015 MAST3O60307 1309 aa9.04□□□□□ -0.96
NEB-217ENST00000498015 ARAP2Q8WZ64 1704 aa9.03□□□□□ -0.96
NEB-217ENST00000498015 IGF2BP3O00425 579 aaKnown RBP eCLIP9.03□□□□□ -0.96
NEB-217ENST00000498015 IL15P40933 162 aaPredicted RBP9.03□□□□□ -0.96
NEB-217ENST00000498015 SOX10P56693 466 aa9.03□□□□□ -0.96
NEB-217ENST00000498015 MAP3K9P80192 1104 aa9.03□□□□□ -0.96
NEB-217ENST00000498015 PKN2Q16513 984 aaKnown RBP9.03□□□□□ -0.96
NEB-217ENST00000498015 NOM1Q5C9Z4 860 aaKnown RBP9.03□□□□□ -0.96
NEB-217ENST00000498015 ZKSCAN2Q63HK3 967 aa9.03□□□□□ -0.96
NEB-217ENST00000498015 INTS3Q68E01 1043 aaKnown RBP9.03□□□□□ -0.96
NEB-217ENST00000498015 B4GALNT3Q6L9W6 998 aa9.03□□□□□ -0.96
NEB-217ENST00000498015 HHIPL2Q6UWX4 724 aa9.03□□□□□ -0.96
NEB-217ENST00000498015 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.03□□□□□ -0.96
NEB-217ENST00000498015 FRAT1Q92837 279 aaPredicted RBP9.03□□□□□ -0.96
NEB-217ENST00000498015 OPTNQ96CV9 577 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms