RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 TRMT2AQ8IZ69 625 aaKnown RBP14.72□□□□□ -0.05
NUDCD3-211ENST00000497978 KLHDC4Q8TBB5 520 aa14.72□□□□□ -0.05
NUDCD3-211ENST00000497978 HDAC5Q9UQL6 1122 aa14.72□□□□□ -0.05
NUDCD3-211ENST00000497978 TBC1D8O95759 1140 aa14.71□□□□□ -0.05
NUDCD3-211ENST00000497978 IFIT1P09914 478 aaKnown RBP14.71□□□□□ -0.05
NUDCD3-211ENST00000497978 CRKP46108 304 aa14.71□□□□□ -0.05
NUDCD3-211ENST00000497978 RASA3Q14644 834 aa14.71□□□□□ -0.05
NUDCD3-211ENST00000497978 PUM3Q15397 648 aaKnown RBP14.71□□□□□ -0.05
NUDCD3-211ENST00000497978 VGLL2Q8N8G2 317 aa14.71□□□□□ -0.05
NUDCD3-211ENST00000497978 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.71□□□□□ -0.05
NUDCD3-211ENST00000497978 ZNF70Q9UC06 446 aaPredicted RBP14.71□□□□□ -0.05
NUDCD3-211ENST00000497978 FZD1Q9UP38 647 aa14.71□□□□□ -0.05
NUDCD3-211ENST00000497978 IQSEC3Q9UPP2 1182 aaPredicted RBP14.71□□□□□ -0.05
NUDCD3-211ENST00000497978 ARAP2Q8WZ64 1704 aa14.7□□□□□ -0.06
NUDCD3-211ENST00000497978 MANSC4A6NHS7 340 aaPredicted RBP14.7□□□□□ -0.06
NUDCD3-211ENST00000497978 ALDH1A1P00352 501 aa14.7□□□□□ -0.06
NUDCD3-211ENST00000497978 UBTFL1P0CB47 393 aaPredicted RBP14.7□□□□□ -0.06
NUDCD3-211ENST00000497978 TNNI2P48788 182 aa14.7□□□□□ -0.06
NUDCD3-211ENST00000497978 INHBEP58166 350 aa14.7□□□□□ -0.06
NUDCD3-211ENST00000497978 MLLT1Q03111 559 aaPredicted RBP14.7□□□□□ -0.06
NUDCD3-211ENST00000497978 NBPF12Q5TAG4 269 aaPredicted RBP14.7□□□□□ -0.06
NUDCD3-211ENST00000497978 DZIP1LQ8IYY4 767 aaKnown RBP14.7□□□□□ -0.06
NUDCD3-211ENST00000497978 API5Q9BZZ5 524 aaKnown RBP14.7□□□□□ -0.06
NUDCD3-211ENST00000497978 TDRD3Q9H7E2 651 aaKnown RBP14.7□□□□□ -0.06
NUDCD3-211ENST00000497978 AOX1Q06278 1338 aa14.69□□□□□ -0.06
NUDCD3-211ENST00000497978 KIF16BQ96L93 1317 aa14.69□□□□□ -0.06
NUDCD3-211ENST00000497978 EYA2O00167 538 aa14.69□□□□□ -0.06
NUDCD3-211ENST00000497978 ZBTB48P10074 688 aaPredicted RBP14.69□□□□□ -0.06
NUDCD3-211ENST00000497978 SLC5A1P13866 664 aa14.69□□□□□ -0.06
NUDCD3-211ENST00000497978 RGS19P49795 217 aa14.69□□□□□ -0.06
NUDCD3-211ENST00000497978 BCAMP50895 628 aa14.69□□□□□ -0.06
NUDCD3-211ENST00000497978 HDLBPQ00341 1268 aaKnown RBP14.69□□□□□ -0.06
NUDCD3-211ENST00000497978 NOM1Q5C9Z4 860 aaKnown RBP14.69□□□□□ -0.06
NUDCD3-211ENST00000497978 TEKT1Q969V4 418 aa14.69□□□□□ -0.06
NUDCD3-211ENST00000497978 NOB1Q9ULX3 412 aaKnown RBP14.69□□□□□ -0.06
NUDCD3-211ENST00000497978 SSC5DA1L4H1 1573 aa14.68□□□□□ -0.06
NUDCD3-211ENST00000497978 MAST3O60307 1309 aa14.68□□□□□ -0.06
NUDCD3-211ENST00000497978 TCP10L2B9ZVM9 353 aa14.68□□□□□ -0.06
NUDCD3-211ENST00000497978 GPR25O00155 361 aa14.68□□□□□ -0.06
NUDCD3-211ENST00000497978 RFX5P48382 616 aaPredicted RBP14.68□□□□□ -0.06
NUDCD3-211ENST00000497978 PKN2Q16513 984 aaKnown RBP14.68□□□□□ -0.06
NUDCD3-211ENST00000497978 ANKRD13AQ8IZ07 590 aa14.68□□□□□ -0.06
NUDCD3-211ENST00000497978 ZNF296Q8WUU4 475 aaPredicted RBP14.68□□□□□ -0.06
NUDCD3-211ENST00000497978 LPIN2Q92539 896 aa14.68□□□□□ -0.06
NUDCD3-211ENST00000497978 WNK4Q96J92 1243 aa14.68□□□□□ -0.06
NUDCD3-211ENST00000497978 CLMNQ96JQ2 1002 aa14.68□□□□□ -0.06
NUDCD3-211ENST00000497978 SUGT1Q9Y2Z0 365 aa14.68□□□□□ -0.06
NUDCD3-211ENST00000497978 USP2O75604 605 aaPredicted RBP14.67□□□□□ -0.06
NUDCD3-211ENST00000497978 FGFR2P21802 821 aa14.67□□□□□ -0.06
NUDCD3-211ENST00000497978 MRIQ9BWK5 157 aa14.67□□□□□ -0.06
NUDCD3-211ENST00000497978 CFHR5Q9BXR6 569 aa14.67□□□□□ -0.06
NUDCD3-211ENST00000497978 TMOD2Q9NZR1 351 aa14.67□□□□□ -0.06
NUDCD3-211ENST00000497978 FKTNO75072 461 aa14.66□□□□□ -0.06
NUDCD3-211ENST00000497978 CIAO1O76071 339 aa14.66□□□□□ -0.06
NUDCD3-211ENST00000497978 OTUD7BQ6GQQ9 843 aa14.66□□□□□ -0.06
NUDCD3-211ENST00000497978 IFNL1Q8IU54 200 aa14.66□□□□□ -0.06
NUDCD3-211ENST00000497978 WDR66Q8TBY9 1149 aa14.66□□□□□ -0.06
NUDCD3-211ENST00000497978 CEP126Q9P2H0 1117 aa14.66□□□□□ -0.06
NUDCD3-211ENST00000497978 GRIK5Q16478 980 aa14.65□□□□□ -0.06
NUDCD3-211ENST00000497978 ATG9AQ7Z3C6 839 aa14.65□□□□□ -0.06
NUDCD3-211ENST00000497978 HOOK2Q96ED9 719 aa14.65□□□□□ -0.06
NUDCD3-211ENST00000497978 ZDHHC15Q96MV8 337 aa14.65□□□□□ -0.06
NUDCD3-211ENST00000497978 TMEM39BQ9GZU3 492 aa14.65□□□□□ -0.06
NUDCD3-211ENST00000497978 SIL1Q9H173 461 aa14.65□□□□□ -0.06
NUDCD3-211ENST00000497978 GNL3LQ9NVN8 582 aaKnown RBP14.65□□□□□ -0.06
NUDCD3-211ENST00000497978 RARSP54136 660 aaKnown RBP14.64□□□□□ -0.07
NUDCD3-211ENST00000497978 ATP2B3Q16720 1220 aa14.64□□□□□ -0.07
NUDCD3-211ENST00000497978 HHIPL2Q6UWX4 724 aa14.64□□□□□ -0.07
NUDCD3-211ENST00000497978 ARHGAP45Q92619 1136 aa14.64□□□□□ -0.07
NUDCD3-211ENST00000497978 TEPSINQ96N21 525 aa14.64□□□□□ -0.07
NUDCD3-211ENST00000497978 ELP3Q9H9T3 547 aa14.64□□□□□ -0.07
NUDCD3-211ENST00000497978 CSADQ9Y600 493 aa14.64□□□□□ -0.07
NUDCD3-211ENST00000497978 LRRFIP2Q9Y608 721 aaKnown RBP14.64□□□□□ -0.07
NUDCD3-211ENST00000497978 MYH13Q9UKX3 1938 aa14.63□□□□□ -0.07
NUDCD3-211ENST00000497978 GNAI3P08754 354 aa14.63□□□□□ -0.07
NUDCD3-211ENST00000497978 IL15P40933 162 aaPredicted RBP14.63□□□□□ -0.07
NUDCD3-211ENST00000497978 MAP3K9P80192 1104 aa14.63□□□□□ -0.07
NUDCD3-211ENST00000497978 OPTNQ96CV9 577 aa14.63□□□□□ -0.07
NUDCD3-211ENST00000497978 HPS5Q9UPZ3 1129 aa14.63□□□□□ -0.07
NUDCD3-211ENST00000497978 IGF2BP3O00425 579 aaKnown RBP eCLIP14.62□□□□□ -0.07
NUDCD3-211ENST00000497978 IPO8O15397 1037 aaKnown RBP14.62□□□□□ -0.07
NUDCD3-211ENST00000497978 CACNB3P54284 484 aa14.62□□□□□ -0.07
NUDCD3-211ENST00000497978 FKBP1CQ5VVH2 108 aa14.62□□□□□ -0.07
NUDCD3-211ENST00000497978 FAM83AQ86UY5 434 aa14.62□□□□□ -0.07
NUDCD3-211ENST00000497978 R3HDMLQ9H3Y0 253 aa14.62□□□□□ -0.07
NUDCD3-211ENST00000497978 LAMB1P07942 1786 aa14.61□□□□□ -0.07
NUDCD3-211ENST00000497978 SEMA3EO15041 775 aa14.61□□□□□ -0.07
NUDCD3-211ENST00000497978 GJA5P36382 358 aa14.61□□□□□ -0.07
NUDCD3-211ENST00000497978 SOX10P56693 466 aa14.61□□□□□ -0.07
NUDCD3-211ENST00000497978 VGLL4Q14135 290 aa14.61□□□□□ -0.07
NUDCD3-211ENST00000497978 INTS3Q68E01 1043 aaKnown RBP14.61□□□□□ -0.07
NUDCD3-211ENST00000497978 APOBEC3HQ6NTF7 200 aaKnown RBP14.61□□□□□ -0.07
NUDCD3-211ENST00000497978 FBXO46Q6PJ61 603 aaPredicted RBP14.61□□□□□ -0.07
NUDCD3-211ENST00000497978 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.61□□□□□ -0.07
NUDCD3-211ENST00000497978 CDAN1Q8IWY9 1227 aa14.61□□□□□ -0.07
NUDCD3-211ENST00000497978 MEIS3Q99687 375 aa14.61□□□□□ -0.07
NUDCD3-211ENST00000497978 COPRSQ9NQ92 184 aa14.61□□□□□ -0.07
NUDCD3-211ENST00000497978 DENND2AQ9ULE3 1009 aa14.61□□□□□ -0.07
NUDCD3-211ENST00000497978 OTOFQ9HC10 1997 aa14.6□□□□□ -0.07
NUDCD3-211ENST00000497978 TESPA1A2RU30 521 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms