RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 MS4A1P11836 297 aa18.97■□□□□ 0.63
NUP50-219ENST00000497960 RLBP1P12271 317 aa18.97■□□□□ 0.63
NUP50-219ENST00000497960 LBX1P52954 281 aa18.97■□□□□ 0.63
NUP50-219ENST00000497960 GRIK5Q16478 980 aa18.97■□□□□ 0.63
NUP50-219ENST00000497960 IFFO2Q5TF58 517 aa18.97■□□□□ 0.63
NUP50-219ENST00000497960 MOB2Q70IA6 237 aa18.97■□□□□ 0.63
NUP50-219ENST00000497960 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.97■□□□□ 0.63
NUP50-219ENST00000497960 TEKT1Q969V4 418 aa18.97■□□□□ 0.63
NUP50-219ENST00000497960 ZNF70Q9UC06 446 aaPredicted RBP18.97■□□□□ 0.63
NUP50-219ENST00000497960 SEMA3EO15041 775 aa18.96■□□□□ 0.63
NUP50-219ENST00000497960 HSPA8P11142 646 aaKnown RBP18.96■□□□□ 0.63
NUP50-219ENST00000497960 TFCP2Q12800 502 aa18.96■□□□□ 0.63
NUP50-219ENST00000497960 SUPT20HL1Q3ZLR7 823 aa18.96■□□□□ 0.63
NUP50-219ENST00000497960 SPDYE2Q495Y8 402 aa18.96■□□□□ 0.63
NUP50-219ENST00000497960 TNS4Q8IZW8 715 aa18.96■□□□□ 0.63
NUP50-219ENST00000497960 MRIQ9BWK5 157 aa18.96■□□□□ 0.63
NUP50-219ENST00000497960 TDRD3Q9H7E2 651 aaKnown RBP18.96■□□□□ 0.63
NUP50-219ENST00000497960 DENND2AQ9ULE3 1009 aa18.96■□□□□ 0.63
NUP50-219ENST00000497960 AOX1Q06278 1338 aa18.96■□□□□ 0.63
NUP50-219ENST00000497960 ZBTB7BO15156 539 aaPredicted RBP18.95■□□□□ 0.62
NUP50-219ENST00000497960 PHKA1P46020 1223 aa18.95■□□□□ 0.62
NUP50-219ENST00000497960 TIMM10P62072 90 aa18.95■□□□□ 0.62
NUP50-219ENST00000497960 KIF23Q02241 960 aaPredicted RBP18.95■□□□□ 0.62
NUP50-219ENST00000497960 PRKG1Q13976 671 aa18.95■□□□□ 0.62
NUP50-219ENST00000497960 ZIC5Q96T25 663 aa18.95■□□□□ 0.62
NUP50-219ENST00000497960 A0A1B0GUL7 405 aa18.94■□□□□ 0.62
NUP50-219ENST00000497960 PPP1R12BO60237 982 aaPredicted RBP18.94■□□□□ 0.62
NUP50-219ENST00000497960 ADORA1P30542 326 aa18.94■□□□□ 0.62
NUP50-219ENST00000497960 ATP8B2P98198 1209 aa18.94■□□□□ 0.62
NUP50-219ENST00000497960 RASA3Q14644 834 aa18.94■□□□□ 0.62
NUP50-219ENST00000497960 CCDC102BQ68D86 513 aa18.94■□□□□ 0.62
NUP50-219ENST00000497960 RASAL3Q86YV0 1011 aa18.94■□□□□ 0.62
NUP50-219ENST00000497960 C1orf115Q9H7X2 142 aa18.94■□□□□ 0.62
NUP50-219ENST00000497960 ANGEL1Q9UNK9 670 aaKnown RBP18.94■□□□□ 0.62
NUP50-219ENST00000497960 ARAP2Q8WZ64 1704 aa18.94■□□□□ 0.62
NUP50-219ENST00000497960 TNNI2P48788 182 aa18.93■□□□□ 0.62
NUP50-219ENST00000497960 OS9Q13438 667 aaPredicted RBP18.93■□□□□ 0.62
NUP50-219ENST00000497960 POLA2Q14181 598 aa18.93■□□□□ 0.62
NUP50-219ENST00000497960 MVPQ14764 893 aaKnown RBP18.93■□□□□ 0.62
NUP50-219ENST00000497960 HHIPL2Q6UWX4 724 aa18.93■□□□□ 0.62
NUP50-219ENST00000497960 REM2Q8IYK8 340 aaPredicted RBP18.93■□□□□ 0.62
NUP50-219ENST00000497960 PANK1Q8TE04 598 aa18.93■□□□□ 0.62
NUP50-219ENST00000497960 XAGE2Q96GT9 111 aa18.93■□□□□ 0.62
NUP50-219ENST00000497960 ZDHHC15Q96MV8 337 aa18.93■□□□□ 0.62
NUP50-219ENST00000497960 NEUROD6Q96NK8 337 aa18.93■□□□□ 0.62
NUP50-219ENST00000497960 TMOD2Q9NZR1 351 aa18.93■□□□□ 0.62
NUP50-219ENST00000497960 ECM29Q5VYK3 1845 aa18.93■□□□□ 0.62
NUP50-219ENST00000497960 TCP10L2B9ZVM9 353 aa18.92■□□□□ 0.62
NUP50-219ENST00000497960 ZBTB22O15209 634 aa18.92■□□□□ 0.62
NUP50-219ENST00000497960 LDHBP07195 334 aaKnown RBP18.92■□□□□ 0.62
NUP50-219ENST00000497960 GORABQ5T7V8 394 aa18.92■□□□□ 0.62
NUP50-219ENST00000497960 ZGPATQ8N5A5 531 aaKnown RBP18.92■□□□□ 0.62
NUP50-219ENST00000497960 SSH3Q8TE77 659 aa18.92■□□□□ 0.62
NUP50-219ENST00000497960 RRP1P56182 461 aaKnown RBP18.91■□□□□ 0.62
NUP50-219ENST00000497960 NBPF12Q5TAG4 269 aaPredicted RBP18.91■□□□□ 0.62
NUP50-219ENST00000497960 TSKSQ9UJT2 592 aa18.91■□□□□ 0.62
NUP50-219ENST00000497960 SALL1Q9NSC2 1324 aa18.91■□□□□ 0.62
NUP50-219ENST00000497960 SURF6O75683 361 aaKnown RBP18.9■□□□□ 0.62
NUP50-219ENST00000497960 IREB2P48200 963 aaKnown RBP18.9■□□□□ 0.62
NUP50-219ENST00000497960 MAP3K11Q16584 847 aa18.9■□□□□ 0.62
NUP50-219ENST00000497960 LDLRAD1Q5T700 205 aa18.9■□□□□ 0.62
NUP50-219ENST00000497960 APOBEC3HQ6NTF7 200 aaKnown RBP18.9■□□□□ 0.62
NUP50-219ENST00000497960 MYH13Q9UKX3 1938 aa18.9■□□□□ 0.62
NUP50-219ENST00000497960 PRDX5P30044 214 aa18.89■□□□□ 0.61
NUP50-219ENST00000497960 RASGRF1Q13972 1273 aa18.89■□□□□ 0.61
NUP50-219ENST00000497960 CSRNP1Q96S65 589 aa18.89■□□□□ 0.61
NUP50-219ENST00000497960 UNCXA6NJT0 531 aa18.88■□□□□ 0.61
NUP50-219ENST00000497960 FKBP1CQ5VVH2 108 aa18.88■□□□□ 0.61
NUP50-219ENST00000497960 SPTY2D1Q68D10 685 aaPredicted RBP18.88■□□□□ 0.61
NUP50-219ENST00000497960 SLC10A4Q96EP9 437 aa18.88■□□□□ 0.61
NUP50-219ENST00000497960 TMEM39BQ9GZU3 492 aa18.88■□□□□ 0.61
NUP50-219ENST00000497960 SAGE1Q9NXZ1 904 aa18.88■□□□□ 0.61
NUP50-219ENST00000497960 FZD1Q9UP38 647 aa18.88■□□□□ 0.61
NUP50-219ENST00000497960 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.88■□□□□ 0.61
NUP50-219ENST00000497960 PDS5AQ29RF7 1337 aaKnown RBP18.88■□□□□ 0.61
NUP50-219ENST00000497960 SSC5DA1L4H1 1573 aa18.87■□□□□ 0.61
NUP50-219ENST00000497960 CENPBP07199 599 aaPredicted RBP18.87■□□□□ 0.61
NUP50-219ENST00000497960 CACNB3P54284 484 aa18.87■□□□□ 0.61
NUP50-219ENST00000497960 DIXDC1Q155Q3 683 aa18.87■□□□□ 0.61
NUP50-219ENST00000497960 CEP85Q6P2H3 762 aa18.87■□□□□ 0.61
NUP50-219ENST00000497960 GPR108Q9NPR9 543 aa18.87■□□□□ 0.61
NUP50-219ENST00000497960 ABCF2Q9UG63 623 aa18.87■□□□□ 0.61
NUP50-219ENST00000497960 DDX19BQ9UMR2 479 aa18.87■□□□□ 0.61
NUP50-219ENST00000497960 NOP58Q9Y2X3 529 aaKnown RBP18.87■□□□□ 0.61
NUP50-219ENST00000497960 DAGLAQ9Y4D2 1042 aa18.87■□□□□ 0.61
NUP50-219ENST00000497960 USP2O75604 605 aaPredicted RBP18.86■□□□□ 0.61
NUP50-219ENST00000497960 MKRN3Q13064 507 aaKnown RBP18.86■□□□□ 0.61
NUP50-219ENST00000497960 FAM83AQ86UY5 434 aa18.86■□□□□ 0.61
NUP50-219ENST00000497960 DZIP1Q86YF9 867 aaKnown RBP18.86■□□□□ 0.61
NUP50-219ENST00000497960 SLF2Q8IX21 1173 aa18.86■□□□□ 0.61
NUP50-219ENST00000497960 TEPSINQ96N21 525 aa18.86■□□□□ 0.61
NUP50-219ENST00000497960 CHMP4BQ9H444 224 aaKnown RBP18.86■□□□□ 0.61
NUP50-219ENST00000497960 RNF186Q9NXI6 227 aa18.86■□□□□ 0.61
NUP50-219ENST00000497960 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.86■□□□□ 0.61
NUP50-219ENST00000497960 TRPA1O75762 1119 aa18.85■□□□□ 0.61
NUP50-219ENST00000497960 UQCRFS1P1P0C7P4 283 aa18.85■□□□□ 0.61
NUP50-219ENST00000497960 TNNI3KQ59H18 835 aa18.85■□□□□ 0.61
NUP50-219ENST00000497960 SPRYD7Q5W111 196 aa18.85■□□□□ 0.61
NUP50-219ENST00000497960 ANKRD13AQ8IZ07 590 aa18.85■□□□□ 0.61
NUP50-219ENST00000497960 HOOK2Q96ED9 719 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms