RNA–Protein interactions for RNA: ENST00000497448.1

TOM1-217, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-217ENST00000497448 CETPP11597 493 aa13.46□□□□□ -0.25
TOM1-217ENST00000497448 PSMC4P43686 418 aa13.46□□□□□ -0.25
TOM1-217ENST00000497448 MAP3K9P80192 1104 aa13.46□□□□□ -0.25
TOM1-217ENST00000497448 CHRNDQ07001 517 aa13.46□□□□□ -0.25
TOM1-217ENST00000497448 DEFB123Q8N688 67 aa13.46□□□□□ -0.25
TOM1-217ENST00000497448 U2AF1L4Q8WU68 220 aaKnown RBP13.46□□□□□ -0.25
TOM1-217ENST00000497448 MBIPQ9NS73 344 aa13.46□□□□□ -0.25
TOM1-217ENST00000497448 ZNF70Q9UC06 446 aaPredicted RBP13.46□□□□□ -0.25
TOM1-217ENST00000497448 STXBP5LQ9Y2K9 1186 aa13.46□□□□□ -0.25
TOM1-217ENST00000497448 SNCAIPQ9Y6H5 919 aa13.46□□□□□ -0.25
TOM1-217ENST00000497448 ADGRA2Q96PE1 1338 aa13.45□□□□□ -0.26
TOM1-217ENST00000497448 IL1R1P14778 569 aa13.45□□□□□ -0.26
TOM1-217ENST00000497448 ITGA6P23229 1130 aa13.45□□□□□ -0.26
TOM1-217ENST00000497448 GPR153Q6NV75 609 aa13.45□□□□□ -0.26
TOM1-217ENST00000497448 CCDC146Q8IYE0 955 aa13.45□□□□□ -0.26
TOM1-217ENST00000497448 TMEM39BQ9GZU3 492 aa13.45□□□□□ -0.26
TOM1-217ENST00000497448 CPA4Q9UI42 421 aa13.45□□□□□ -0.26
TOM1-217ENST00000497448 MAP3K2Q9Y2U5 619 aa13.45□□□□□ -0.26
TOM1-217ENST00000497448 EYSQ5T1H1 3165 aa13.44□□□□□ -0.26
TOM1-217ENST00000497448 SPTBN5Q9NRC6 3674 aaKnown RBP13.44□□□□□ -0.26
TOM1-217ENST00000497448 IRF6O14896 467 aa13.44□□□□□ -0.26
TOM1-217ENST00000497448 DDX58O95786 925 aaKnown RBP13.44□□□□□ -0.26
TOM1-217ENST00000497448 UBXN2AP68543 259 aa13.44□□□□□ -0.26
TOM1-217ENST00000497448 SNAPC2Q13487 334 aa13.44□□□□□ -0.26
TOM1-217ENST00000497448 C15orf52Q6ZUT6 534 aaKnown RBP13.44□□□□□ -0.26
TOM1-217ENST00000497448 MPHOSPH8Q99549 860 aa13.44□□□□□ -0.26
TOM1-217ENST00000497448 UNC93B1Q9H1C4 597 aa13.44□□□□□ -0.26
TOM1-217ENST00000497448 TDRD3Q9H7E2 651 aaKnown RBP13.44□□□□□ -0.26
TOM1-217ENST00000497448 TCP10L2B9ZVM9 353 aa13.43□□□□□ -0.26
TOM1-217ENST00000497448 FMNL1O95466 1100 aaPredicted RBP13.43□□□□□ -0.26
TOM1-217ENST00000497448 HOXD10P28358 340 aa13.43□□□□□ -0.26
TOM1-217ENST00000497448 PRKCZQ05513 592 aa13.43□□□□□ -0.26
TOM1-217ENST00000497448 CWF19L2Q2TBE0 894 aaKnown RBP13.43□□□□□ -0.26
TOM1-217ENST00000497448 UBE3BQ7Z3V4 1068 aa13.43□□□□□ -0.26
TOM1-217ENST00000497448 ZNF804AQ7Z570 1209 aa13.43□□□□□ -0.26
TOM1-217ENST00000497448 ERO1BQ86YB8 467 aa13.43□□□□□ -0.26
TOM1-217ENST00000497448 GDF15Q99988 308 aa13.43□□□□□ -0.26
TOM1-217ENST00000497448 BIN2Q9UBW5 565 aaPredicted RBP13.43□□□□□ -0.26
TOM1-217ENST00000497448 ZNF316A6NFI3 1004 aaPredicted RBP13.42□□□□□ -0.26
TOM1-217ENST00000497448 TAF5LO75529 589 aa13.42□□□□□ -0.26
TOM1-217ENST00000497448 SGPL1O95470 568 aa13.42□□□□□ -0.26
TOM1-217ENST00000497448 PPIL2Q13356 520 aa13.42□□□□□ -0.26
TOM1-217ENST00000497448 SLAIN1Q8ND83 568 aa13.42□□□□□ -0.26
TOM1-217ENST00000497448 HELBQ8NG08 1087 aaPredicted RBP13.42□□□□□ -0.26
TOM1-217ENST00000497448 WRNIP1Q96S55 665 aa13.42□□□□□ -0.26
TOM1-217ENST00000497448 MTMR10Q9NXD2 777 aa13.42□□□□□ -0.26
TOM1-217ENST00000497448 SERPINA10Q9UK55 444 aa13.42□□□□□ -0.26
TOM1-217ENST00000497448 NEURL1BA8MQ27 555 aa13.41□□□□□ -0.26
TOM1-217ENST00000497448 ELL2O00472 640 aaPredicted RBP13.41□□□□□ -0.26
TOM1-217ENST00000497448 BMP8BP34820 402 aa13.41□□□□□ -0.26
TOM1-217ENST00000497448 TNNI2P48788 182 aa13.41□□□□□ -0.26
TOM1-217ENST00000497448 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.41□□□□□ -0.26
TOM1-217ENST00000497448 DZIP1LQ8IYY4 767 aaKnown RBP13.41□□□□□ -0.26
TOM1-217ENST00000497448 ZKSCAN4Q969J2 545 aaPredicted RBP13.41□□□□□ -0.26
TOM1-217ENST00000497448 PLA2G12BQ9BX93 195 aa13.41□□□□□ -0.26
TOM1-217ENST00000497448 TTF2Q9UNY4 1162 aaKnown RBP13.41□□□□□ -0.26
TOM1-217ENST00000497448 DDX60LQ5H9U9 1706 aaKnown RBP13.4□□□□□ -0.26
TOM1-217ENST00000497448 PI4KAP2A4QPH2 592 aa13.4□□□□□ -0.26
TOM1-217ENST00000497448 H7C1W4 665 aa13.4□□□□□ -0.26
TOM1-217ENST00000497448 ZNF853P0CG23 659 aa13.4□□□□□ -0.26
TOM1-217ENST00000497448 LRIT3Q3SXY7 679 aa13.4□□□□□ -0.26
TOM1-217ENST00000497448 MFSD14BQ5SR56 506 aa13.4□□□□□ -0.26
TOM1-217ENST00000497448 KSR2Q6VAB6 950 aa13.4□□□□□ -0.26
TOM1-217ENST00000497448 ANKRD23Q86SG2 305 aa13.4□□□□□ -0.26
TOM1-217ENST00000497448 PI4KAP1Q8N8J0 262 aa13.4□□□□□ -0.26
TOM1-217ENST00000497448 GABRQQ9UN88 632 aa13.4□□□□□ -0.26
TOM1-217ENST00000497448 FAM205AQ6ZU69 1335 aa13.39□□□□□ -0.27
TOM1-217ENST00000497448 PDHXO00330 501 aa13.39□□□□□ -0.27
TOM1-217ENST00000497448 CSF1RP07333 972 aa13.39□□□□□ -0.27
TOM1-217ENST00000497448 BCAMP50895 628 aa13.39□□□□□ -0.27
TOM1-217ENST00000497448 NEXNQ0ZGT2 675 aa13.39□□□□□ -0.27
TOM1-217ENST00000497448 C7orf61Q8IZ16 206 aa13.39□□□□□ -0.27
TOM1-217ENST00000497448 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.39□□□□□ -0.27
TOM1-217ENST00000497448 INHAP05111 366 aa13.38□□□□□ -0.27
TOM1-217ENST00000497448 CRKP46108 304 aa13.38□□□□□ -0.27
TOM1-217ENST00000497448 CACNB3P54284 484 aa13.38□□□□□ -0.27
TOM1-217ENST00000497448 CASP7P55210 303 aa13.38□□□□□ -0.27
TOM1-217ENST00000497448 FCGRTP55899 365 aa13.38□□□□□ -0.27
TOM1-217ENST00000497448 DIS3LQ8TF46 1054 aaKnown RBP13.38□□□□□ -0.27
TOM1-217ENST00000497448 RUNDC1Q96C34 613 aa13.38□□□□□ -0.27
TOM1-217ENST00000497448 PAWRQ96IZ0 340 aaKnown RBP13.38□□□□□ -0.27
TOM1-217ENST00000497448 DEFB118Q96PH6 123 aa13.38□□□□□ -0.27
TOM1-217ENST00000497448 ZMYND8Q9ULU4 1186 aaPredicted RBP13.38□□□□□ -0.27
TOM1-217ENST00000497448 LAMA2P24043 3122 aaKnown RBP13.37□□□□□ -0.27
TOM1-217ENST00000497448 RPAP1Q9BWH6 1393 aaPredicted RBP13.37□□□□□ -0.27
TOM1-217ENST00000497448 ANKRD18BA2A2Z9 1011 aa13.37□□□□□ -0.27
TOM1-217ENST00000497448 TFRCP02786 760 aaKnown RBP13.37□□□□□ -0.27
TOM1-217ENST00000497448 BCRP11274 1271 aa13.37□□□□□ -0.27
TOM1-217ENST00000497448 ELNP15502 786 aa13.37□□□□□ -0.27
TOM1-217ENST00000497448 PPATQ06203 517 aa13.37□□□□□ -0.27
TOM1-217ENST00000497448 MOGSQ13724 837 aa13.37□□□□□ -0.27
TOM1-217ENST00000497448 TDHQ8IZJ6 230 aa13.37□□□□□ -0.27
TOM1-217ENST00000497448 C8orf58Q8NAV2 365 aa13.37□□□□□ -0.27
TOM1-217ENST00000497448 CRISPLD2Q9H0B8 497 aa13.37□□□□□ -0.27
TOM1-217ENST00000497448 PAK6Q9NQU5 681 aaPredicted RBP13.37□□□□□ -0.27
TOM1-217ENST00000497448 ADCY3O60266 1144 aa13.36□□□□□ -0.27
TOM1-217ENST00000497448 CCDC30Q5VVM6 783 aa13.36□□□□□ -0.27
TOM1-217ENST00000497448 PARK7Q99497 189 aaKnown RBP13.36□□□□□ -0.27
TOM1-217ENST00000497448 IFT57Q9NWB7 429 aa13.36□□□□□ -0.27
TOM1-217ENST00000497448 KCNH4Q9UQ05 1017 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms