RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 NUDCQ9Y266 331 aa6.27□□□□□ -1.41
CMSS1-209ENST00000497345 RBM19Q9Y4C8 960 aaKnown RBP6.27□□□□□ -1.41
CMSS1-209ENST00000497345 GTF3C3Q9Y5Q9 886 aa6.27□□□□□ -1.41
CMSS1-209ENST00000497345 POLR3AO14802 1390 aaPredicted RBP6.27□□□□□ -1.41
CMSS1-209ENST00000497345 TTC21AQ8NDW8 1320 aa6.26□□□□□ -1.41
CMSS1-209ENST00000497345 MST1RQ04912 1400 aa6.26□□□□□ -1.41
CMSS1-209ENST00000497345 SIN3BO75182 1162 aa6.26□□□□□ -1.41
CMSS1-209ENST00000497345 PIP4K2BP78356 416 aa6.26□□□□□ -1.41
CMSS1-209ENST00000497345 IRX6P78412 446 aaPredicted RBP6.26□□□□□ -1.41
CMSS1-209ENST00000497345 TMEM132AQ24JP5 1023 aa6.26□□□□□ -1.41
CMSS1-209ENST00000497345 TSEN2Q8NCE0 465 aaKnown RBP6.26□□□□□ -1.41
CMSS1-209ENST00000497345 GLMNQ92990 594 aa6.26□□□□□ -1.41
CMSS1-209ENST00000497345 SLC30A3Q99726 388 aa6.26□□□□□ -1.41
CMSS1-209ENST00000497345 MDFIQ99750 246 aa6.26□□□□□ -1.41
CMSS1-209ENST00000497345 PHACTR1Q9C0D0 580 aa6.26□□□□□ -1.41
CMSS1-209ENST00000497345 SLAIN2Q9P270 581 aa6.26□□□□□ -1.41
CMSS1-209ENST00000497345 MAP2P11137 1827 aaKnown RBP6.26□□□□□ -1.41
CMSS1-209ENST00000497345 XIRP1Q702N8 1843 aaKnown RBP6.26□□□□□ -1.41
CMSS1-209ENST00000497345 ZBED9Q6R2W3 1325 aa6.25□□□□□ -1.41
CMSS1-209ENST00000497345 ADARB2-AS1A8MUL3 147 aa6.25□□□□□ -1.41
CMSS1-209ENST00000497345 C21orf2O43822 256 aa6.25□□□□□ -1.41
CMSS1-209ENST00000497345 PPP1R12BO60237 982 aaPredicted RBP6.25□□□□□ -1.41
CMSS1-209ENST00000497345 RASA1P20936 1047 aa6.25□□□□□ -1.41
CMSS1-209ENST00000497345 ZC3H6P61129 1189 aaKnown RBP6.25□□□□□ -1.41
CMSS1-209ENST00000497345 HSP90AB2PQ58FF8 381 aa6.25□□□□□ -1.41
CMSS1-209ENST00000497345 BRINP3Q76B58 766 aa6.25□□□□□ -1.41
CMSS1-209ENST00000497345 CD163Q86VB7 1156 aa6.25□□□□□ -1.41
CMSS1-209ENST00000497345 TRIM11Q96F44 468 aa6.25□□□□□ -1.41
CMSS1-209ENST00000497345 SUSD3Q96L08 255 aa6.25□□□□□ -1.41
CMSS1-209ENST00000497345 CEP63Q96MT8 703 aa6.25□□□□□ -1.41
CMSS1-209ENST00000497345 PLVAPQ9BX97 442 aa6.25□□□□□ -1.41
CMSS1-209ENST00000497345 NRKQ7Z2Y5 1582 aa6.25□□□□□ -1.41
CMSS1-209ENST00000497345 PIK3C2AO00443 1686 aa6.25□□□□□ -1.41
CMSS1-209ENST00000497345 BLMP54132 1417 aaPredicted RBP6.25□□□□□ -1.41
CMSS1-209ENST00000497345 SSH2Q76I76 1423 aa6.25□□□□□ -1.41
CMSS1-209ENST00000497345 MAP3K19Q56UN5 1328 aa6.25□□□□□ -1.41
CMSS1-209ENST00000497345 MAPK8IP3Q9UPT6 1336 aa6.25□□□□□ -1.41
CMSS1-209ENST00000497345 SHPRHQ149N8 1683 aa6.24□□□□□ -1.41
CMSS1-209ENST00000497345 K7ELQ4 463 aaPredicted RBP6.24□□□□□ -1.41
CMSS1-209ENST00000497345 PRKAR2BP31323 418 aa6.24□□□□□ -1.41
CMSS1-209ENST00000497345 IL13P35225 146 aa6.24□□□□□ -1.41
CMSS1-209ENST00000497345 SEC13P55735 322 aa6.24□□□□□ -1.41
CMSS1-209ENST00000497345 SPEM2Q0P670 501 aa6.24□□□□□ -1.41
CMSS1-209ENST00000497345 EIF4A2Q14240 407 aaKnown RBP6.24□□□□□ -1.41
CMSS1-209ENST00000497345 STAG2Q8N3U4 1231 aa6.24□□□□□ -1.41
CMSS1-209ENST00000497345 TCP11L2Q8N4U5 519 aa6.24□□□□□ -1.41
CMSS1-209ENST00000497345 USHBP1Q8N6Y0 703 aa6.24□□□□□ -1.41
CMSS1-209ENST00000497345 ZNF280CQ8ND82 737 aa6.24□□□□□ -1.41
CMSS1-209ENST00000497345 GAS2L2Q8NHY3 880 aa6.24□□□□□ -1.41
CMSS1-209ENST00000497345 TNFRSF25Q93038 417 aa6.24□□□□□ -1.41
CMSS1-209ENST00000497345 RUNDC1Q96C34 613 aa6.24□□□□□ -1.41
CMSS1-209ENST00000497345 HSH2DQ96JZ2 352 aa6.24□□□□□ -1.41
CMSS1-209ENST00000497345 BRD7Q9NPI1 651 aa6.24□□□□□ -1.41
CMSS1-209ENST00000497345 SUPT16HQ9Y5B9 1047 aaKnown RBP6.24□□□□□ -1.41
CMSS1-209ENST00000497345 MAFBQ9Y5Q3 323 aaPredicted RBP6.24□□□□□ -1.41
CMSS1-209ENST00000497345 OVOS2A0A0J9YW53 1432 aa6.24□□□□□ -1.41
CMSS1-209ENST00000497345 OVOS2Q6IE36 1432 aa6.24□□□□□ -1.41
CMSS1-209ENST00000497345 NEFMP07197 916 aa6.23□□□□□ -1.41
CMSS1-209ENST00000497345 FURINP09958 794 aa6.23□□□□□ -1.41
CMSS1-209ENST00000497345 CHRNA4P43681 627 aa6.23□□□□□ -1.41
CMSS1-209ENST00000497345 KCNQ4P56696 695 aa6.23□□□□□ -1.41
CMSS1-209ENST00000497345 CHRNA2Q15822 529 aa6.23□□□□□ -1.41
CMSS1-209ENST00000497345 SULT6B1Q6IMI4 303 aa6.23□□□□□ -1.41
CMSS1-209ENST00000497345 AEBP1Q8IUX7 1158 aa6.23□□□□□ -1.41
CMSS1-209ENST00000497345 ALDH16A1Q8IZ83 802 aa6.23□□□□□ -1.41
CMSS1-209ENST00000497345 SCG3Q8WXD2 468 aaKnown RBP6.23□□□□□ -1.41
CMSS1-209ENST00000497345 C2orf49Q9BVC5 232 aaPredicted RBP6.23□□□□□ -1.41
CMSS1-209ENST00000497345 KCNH4Q9UQ05 1017 aa6.23□□□□□ -1.41
CMSS1-209ENST00000497345 LAS1LQ9Y4W2 734 aaKnown RBP6.23□□□□□ -1.41
CMSS1-209ENST00000497345 NPHP3Q7Z494 1330 aa6.23□□□□□ -1.41
CMSS1-209ENST00000497345 COL3A1P02461 1466 aaPredicted RBP6.22□□□□□ -1.41
CMSS1-209ENST00000497345 PEAK1Q9H792 1746 aa6.22□□□□□ -1.41
CMSS1-209ENST00000497345 USP31Q70CQ4 1352 aa6.22□□□□□ -1.41
CMSS1-209ENST00000497345 GCP02774 474 aa6.22□□□□□ -1.41
CMSS1-209ENST00000497345 HOXC9P31274 260 aa6.22□□□□□ -1.41
CMSS1-209ENST00000497345 LARP1Q6PKG0 1096 aaKnown RBP6.22□□□□□ -1.41
CMSS1-209ENST00000497345 PHACTR3Q96KR7 559 aa6.22□□□□□ -1.41
CMSS1-209ENST00000497345 PPP1R12CQ9BZL4 782 aa6.22□□□□□ -1.41
CMSS1-209ENST00000497345 STARD13Q9Y3M8 1113 aa6.22□□□□□ -1.41
CMSS1-209ENST00000497345 KIF1AQ12756 1690 aa6.22□□□□□ -1.41
CMSS1-209ENST00000497345 NCOA3Q9Y6Q9 1424 aa6.22□□□□□ -1.41
CMSS1-209ENST00000497345 AATKQ6ZMQ8 1374 aa6.21□□□□□ -1.41
CMSS1-209ENST00000497345 A6NJR5 290 aa6.21□□□□□ -1.42
CMSS1-209ENST00000497345 UBAP1LF5GYI3 381 aa6.21□□□□□ -1.42
CMSS1-209ENST00000497345 NEFLP07196 543 aa6.21□□□□□ -1.42
CMSS1-209ENST00000497345 RIPK4P57078 832 aa6.21□□□□□ -1.42
CMSS1-209ENST00000497345 TYRO3Q06418 890 aa6.21□□□□□ -1.42
CMSS1-209ENST00000497345 RAB44Q7Z6P3 723 aaPredicted RBP6.21□□□□□ -1.42
CMSS1-209ENST00000497345 KCNH5Q8NCM2 988 aa6.21□□□□□ -1.42
CMSS1-209ENST00000497345 LRRC59Q96AG4 307 aaKnown RBP6.21□□□□□ -1.42
CMSS1-209ENST00000497345 CALR3Q96L12 384 aaKnown RBP6.21□□□□□ -1.42
CMSS1-209ENST00000497345 HINFPQ9BQA5 517 aa6.21□□□□□ -1.42
CMSS1-209ENST00000497345 THUMPD2Q9BTF0 503 aaKnown RBP6.21□□□□□ -1.42
CMSS1-209ENST00000497345 DCCP43146 1447 aa6.21□□□□□ -1.42
CMSS1-209ENST00000497345 CDK12Q9NYV4 1490 aaPredicted RBP6.21□□□□□ -1.42
CMSS1-209ENST00000497345 SBNO1A3KN83 1393 aa6.2□□□□□ -1.42
CMSS1-209ENST00000497345 FLT4P35916 1363 aa6.2□□□□□ -1.42
CMSS1-209ENST00000497345 MARF1Q9Y4F3 1742 aaKnown RBP6.2□□□□□ -1.42
CMSS1-209ENST00000497345 SPDYE3A6NKU9 549 aa6.2□□□□□ -1.42
CMSS1-209ENST00000497345 M0R082 166 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms