RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 OGFOD1Q8N543 542 aa26.37■■□□□ 1.81
C9orf3-222ENST00000496567 TTF2Q9UNY4 1162 aaKnown RBP26.37■■□□□ 1.81
C9orf3-222ENST00000496567 F8W031 263 aaPredicted RBP26.36■■□□□ 1.81
C9orf3-222ENST00000496567 GRIK5Q16478 980 aa26.36■■□□□ 1.81
C9orf3-222ENST00000496567 HDAC9Q9UKV0 1011 aa26.36■■□□□ 1.81
C9orf3-222ENST00000496567 DOCK2Q92608 1830 aa26.36■■□□□ 1.81
C9orf3-222ENST00000496567 USP17L8P0C7I0 530 aa26.35■■□□□ 1.81
C9orf3-222ENST00000496567 BMP2KLQ5H9B9 411 aa26.35■■□□□ 1.81
C9orf3-222ENST00000496567 ZSCAN25Q6NSZ9 544 aa26.35■■□□□ 1.81
C9orf3-222ENST00000496567 TICAM2Q86XR7 235 aa26.35■■□□□ 1.81
C9orf3-222ENST00000496567 FSD1Q9BTV5 496 aa26.35■■□□□ 1.81
C9orf3-222ENST00000496567 SLF2Q8IX21 1173 aa26.34■■□□□ 1.81
C9orf3-222ENST00000496567 SDSP20132 328 aa26.33■■□□□ 1.81
C9orf3-222ENST00000496567 GSTO1P78417 241 aa26.33■■□□□ 1.81
C9orf3-222ENST00000496567 HDLBPQ00341 1268 aaKnown RBP26.33■■□□□ 1.81
C9orf3-222ENST00000496567 MECOMQ03112 1051 aa26.33■■□□□ 1.81
C9orf3-222ENST00000496567 NSUN4Q96CB9 384 aaKnown RBP26.33■■□□□ 1.81
C9orf3-222ENST00000496567 L3MBTL3Q96JM7 780 aaPredicted RBP26.33■■□□□ 1.81
C9orf3-222ENST00000496567 MRIQ9BWK5 157 aa26.33■■□□□ 1.81
C9orf3-222ENST00000496567 LMOD1P29536 600 aaPredicted RBP26.33■■□□□ 1.8
C9orf3-222ENST00000496567 SLC9C2Q5TAH2 1124 aa26.33■■□□□ 1.8
C9orf3-222ENST00000496567 GPRC5DQ9NZD1 345 aa26.33■■□□□ 1.8
C9orf3-222ENST00000496567 CNOT7Q9UIV1 285 aaKnown RBP26.33■■□□□ 1.8
C9orf3-222ENST00000496567 MYO5AQ9Y4I1 1855 aaKnown RBP26.32■■□□□ 1.8
C9orf3-222ENST00000496567 ZFYP08048 801 aaPredicted RBP26.32■■□□□ 1.8
C9orf3-222ENST00000496567 SCNN1DP51172 638 aa26.32■■□□□ 1.8
C9orf3-222ENST00000496567 NAA16Q6N069 864 aaPredicted RBP26.32■■□□□ 1.8
C9orf3-222ENST00000496567 SERPINA10Q9UK55 444 aa26.32■■□□□ 1.8
C9orf3-222ENST00000496567 H7C1D1 291 aa26.31■■□□□ 1.8
C9orf3-222ENST00000496567 LDHCP07864 332 aa26.31■■□□□ 1.8
C9orf3-222ENST00000496567 MICALL2Q8IY33 904 aa26.31■■□□□ 1.8
C9orf3-222ENST00000496567 MAGEB6Q8N7X4 407 aa26.31■■□□□ 1.8
C9orf3-222ENST00000496567 MAST2Q6P0Q8 1798 aa26.31■■□□□ 1.8
C9orf3-222ENST00000496567 AK9Q5TCS8 1911 aa26.3■■□□□ 1.8
C9orf3-222ENST00000496567 RFX7Q2KHR2 1363 aa26.3■■□□□ 1.8
C9orf3-222ENST00000496567 ZNF280AP59817 542 aaPredicted RBP26.3■■□□□ 1.8
C9orf3-222ENST00000496567 TEKT1Q969V4 418 aa26.3■■□□□ 1.8
C9orf3-222ENST00000496567 PDE6AP16499 860 aa26.29■■□□□ 1.8
C9orf3-222ENST00000496567 ADD2P35612 726 aa26.29■■□□□ 1.8
C9orf3-222ENST00000496567 HHIPL2Q6UWX4 724 aa26.29■■□□□ 1.8
C9orf3-222ENST00000496567 RNF113AO15541 343 aaKnown RBP26.29■■□□□ 1.8
C9orf3-222ENST00000496567 UBE3CQ15386 1083 aa26.29■■□□□ 1.8
C9orf3-222ENST00000496567 DIXDC1Q155Q3 683 aa26.29■■□□□ 1.8
C9orf3-222ENST00000496567 FAM163AQ96GL9 167 aaPredicted RBP26.29■■□□□ 1.8
C9orf3-222ENST00000496567 MYH7P12883 1935 aa26.28■■□□□ 1.8
C9orf3-222ENST00000496567 IQCA1LA6NCM1 817 aa26.28■■□□□ 1.8
C9orf3-222ENST00000496567 HIP1O00291 1037 aa26.28■■□□□ 1.8
C9orf3-222ENST00000496567 CYP7A1P22680 504 aa26.28■■□□□ 1.8
C9orf3-222ENST00000496567 CRKP46108 304 aa26.28■■□□□ 1.8
C9orf3-222ENST00000496567 RBM5P52756 815 aaKnown RBP eCLIP26.28■■□□□ 1.8
C9orf3-222ENST00000496567 ZNF384Q8TF68 577 aa26.28■■□□□ 1.8
C9orf3-222ENST00000496567 WDR90Q96KV7 1748 aa26.27■■□□□ 1.8
C9orf3-222ENST00000496567 MYOZ2Q9NPC6 264 aa26.27■■□□□ 1.8
C9orf3-222ENST00000496567 HACL1Q9UJ83 578 aa26.27■■□□□ 1.8
C9orf3-222ENST00000496567 MROH7-TTC4A0A0A0MT08 1334 aa26.27■■□□□ 1.8
C9orf3-222ENST00000496567 ZNF532Q9HCE3 1301 aa26.27■■□□□ 1.8
C9orf3-222ENST00000496567 MYH2Q9UKX2 1941 aa26.26■■□□□ 1.79
C9orf3-222ENST00000496567 EPS15P42566 896 aa26.26■■□□□ 1.79
C9orf3-222ENST00000496567 CFAP100Q494V2 611 aa26.26■■□□□ 1.79
C9orf3-222ENST00000496567 ZDHHC15Q96MV8 337 aa26.26■■□□□ 1.79
C9orf3-222ENST00000496567 TCRBV5S4A2TA0A5A2 114 aa26.25■■□□□ 1.79
C9orf3-222ENST00000496567 SHTN1A0MZ66 631 aa26.25■■□□□ 1.79
C9orf3-222ENST00000496567 DLGAP5Q15398 846 aa26.25■■□□□ 1.79
C9orf3-222ENST00000496567 MTMR14Q8NCE2 650 aa26.25■■□□□ 1.79
C9orf3-222ENST00000496567 NOL10Q9BSC4 688 aaKnown RBP26.25■■□□□ 1.79
C9orf3-222ENST00000496567 ADARB2Q9NS39 739 aaKnown RBP26.25■■□□□ 1.79
C9orf3-222ENST00000496567 DAGLAQ9Y4D2 1042 aa26.25■■□□□ 1.79
C9orf3-222ENST00000496567 GAKO14976 1311 aa26.25■■□□□ 1.79
C9orf3-222ENST00000496567 SCN4AP35499 1836 aa26.25■■□□□ 1.79
C9orf3-222ENST00000496567 APPBP2Q92624 585 aa26.24■■□□□ 1.79
C9orf3-222ENST00000496567 DIAPH3Q9NSV4 1193 aa26.24■■□□□ 1.79
C9orf3-222ENST00000496567 BAG3O95817 575 aa26.23■■□□□ 1.79
C9orf3-222ENST00000496567 SAMD7Q7Z3H4 446 aa26.23■■□□□ 1.79
C9orf3-222ENST00000496567 CERS3Q8IU89 383 aa26.23■■□□□ 1.79
C9orf3-222ENST00000496567 GPR75-ASB3A0A0A6YYF3 556 aa26.22■■□□□ 1.79
C9orf3-222ENST00000496567 KIF4BQ2VIQ3 1234 aa26.22■■□□□ 1.79
C9orf3-222ENST00000496567 TBC1D10BQ4KMP7 808 aaPredicted RBP26.22■■□□□ 1.79
C9orf3-222ENST00000496567 RBM26Q5T8P6 1007 aaKnown RBP26.22■■□□□ 1.79
C9orf3-222ENST00000496567 ADGRA1Q86SQ6 560 aa26.22■■□□□ 1.79
C9orf3-222ENST00000496567 SPDYE2BA6NHP3 402 aa26.21■■□□□ 1.79
C9orf3-222ENST00000496567 SPDYE6P0CI01 402 aa26.21■■□□□ 1.79
C9orf3-222ENST00000496567 VEGFAP15692 232 aaPredicted RBP26.21■■□□□ 1.79
C9orf3-222ENST00000496567 EPHX2P34913 555 aa26.21■■□□□ 1.79
C9orf3-222ENST00000496567 ZMYM1Q5SVZ6 1142 aa26.21■■□□□ 1.79
C9orf3-222ENST00000496567 POTECB2RU33 542 aa26.2■■□□□ 1.79
C9orf3-222ENST00000496567 CHGBP05060 677 aa26.2■■□□□ 1.79
C9orf3-222ENST00000496567 BTDP43251 543 aa26.2■■□□□ 1.79
C9orf3-222ENST00000496567 SLFNL1Q499Z3 407 aa26.2■■□□□ 1.79
C9orf3-222ENST00000496567 APOBEC3HQ6NTF7 200 aaKnown RBP26.2■■□□□ 1.79
C9orf3-222ENST00000496567 ZBED3Q96IU2 234 aaPredicted RBP26.2■■□□□ 1.79
C9orf3-222ENST00000496567 HELLSQ9NRZ9 838 aa26.2■■□□□ 1.79
C9orf3-222ENST00000496567 WNT10BO00744 389 aa26.2■■□□□ 1.78
C9orf3-222ENST00000496567 MYO1BO43795 1136 aa26.2■■□□□ 1.78
C9orf3-222ENST00000496567 PLCG2P16885 1265 aa26.2■■□□□ 1.78
C9orf3-222ENST00000496567 CHMLP26374 656 aa26.2■■□□□ 1.78
C9orf3-222ENST00000496567 PPP4CP60510 307 aa26.2■■□□□ 1.78
C9orf3-222ENST00000496567 USP50Q70EL3 339 aaPredicted RBP26.2■■□□□ 1.78
C9orf3-222ENST00000496567 ZNF526Q8TF50 670 aaPredicted RBP26.2■■□□□ 1.78
C9orf3-222ENST00000496567 PRMT6Q96LA8 375 aaPredicted RBP26.2■■□□□ 1.78
C9orf3-222ENST00000496567 TAF1DQ9H5J8 278 aaPredicted RBP26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms