RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 PKD1L3Q7Z443 1732 aa17.31■□□□□ 0.36
MACF1-223ENST00000496360 IGSF1Q8N6C5 1336 aa17.31■□□□□ 0.36
MACF1-223ENST00000496360 EIF3JO75822 258 aaKnown RBP17.31■□□□□ 0.36
MACF1-223ENST00000496360 CLASRPQ8N2M8 674 aaKnown RBP17.31■□□□□ 0.36
MACF1-223ENST00000496360 SYTL4Q96C24 671 aaPredicted RBP17.31■□□□□ 0.36
MACF1-223ENST00000496360 TMX1Q9H3N1 280 aa17.31■□□□□ 0.36
MACF1-223ENST00000496360 JRKLQ9Y4A0 524 aa17.31■□□□□ 0.36
MACF1-223ENST00000496360 IKBKBO14920 756 aa17.3■□□□□ 0.36
MACF1-223ENST00000496360 LMAN1P49257 510 aa17.3■□□□□ 0.36
MACF1-223ENST00000496360 MAP3K9P80192 1104 aa17.3■□□□□ 0.36
MACF1-223ENST00000496360 TOB2Q14106 344 aaPredicted RBP17.3■□□□□ 0.36
MACF1-223ENST00000496360 GOLGA1Q92805 767 aa17.3■□□□□ 0.36
MACF1-223ENST00000496360 BRF1Q92994 677 aa17.3■□□□□ 0.36
MACF1-223ENST00000496360 XPO4Q9C0E2 1151 aaKnown RBP17.3■□□□□ 0.36
MACF1-223ENST00000496360 SRCAPQ6ZRS2 3230 aa17.3■□□□□ 0.36
MACF1-223ENST00000496360 A0A1W2PQ27 194 aa17.3■□□□□ 0.36
MACF1-223ENST00000496360 A0A1W2PQ64 194 aa17.3■□□□□ 0.36
MACF1-223ENST00000496360 A0A1W2PQD8 194 aa17.3■□□□□ 0.36
MACF1-223ENST00000496360 TRIM66O15016 1216 aa17.3■□□□□ 0.36
MACF1-223ENST00000496360 CYP27B1O15528 508 aa17.3■□□□□ 0.36
MACF1-223ENST00000496360 SEC31AO94979 1220 aaKnown RBP17.3■□□□□ 0.36
MACF1-223ENST00000496360 TUBB2AQ13885 445 aa17.3■□□□□ 0.36
MACF1-223ENST00000496360 SUGP1Q8IWZ8 645 aaKnown RBP17.3■□□□□ 0.36
MACF1-223ENST00000496360 TUBB2BQ9BVA1 445 aa17.3■□□□□ 0.36
MACF1-223ENST00000496360 HDAC5Q9UQL6 1122 aa17.3■□□□□ 0.36
MACF1-223ENST00000496360 CPP00450 1065 aa17.29■□□□□ 0.36
MACF1-223ENST00000496360 TUBBP07437 444 aa17.29■□□□□ 0.36
MACF1-223ENST00000496360 DDX11Q96FC9 970 aa17.29■□□□□ 0.36
MACF1-223ENST00000496360 FAM107BQ9H098 131 aa17.29■□□□□ 0.36
MACF1-223ENST00000496360 DEF6Q9H4E7 631 aa17.29■□□□□ 0.36
MACF1-223ENST00000496360 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.29■□□□□ 0.361e-6■□□□□ 11.1
MACF1-223ENST00000496360 LCMT1Q9UIC8 334 aa17.29■□□□□ 0.36
MACF1-223ENST00000496360 LRP5O75197 1615 aa17.29■□□□□ 0.36
MACF1-223ENST00000496360 ADD1P35611 737 aaKnown RBP17.28■□□□□ 0.36
MACF1-223ENST00000496360 MTX1Q13505 466 aa17.28■□□□□ 0.36
MACF1-223ENST00000496360 GORABQ5T7V8 394 aa17.28■□□□□ 0.36
MACF1-223ENST00000496360 IFNKQ9P0W0 207 aa17.28■□□□□ 0.36
MACF1-223ENST00000496360 MYH15Q9Y2K3 1946 aa17.28■□□□□ 0.36
MACF1-223ENST00000496360 ARHGAP6O43182 974 aa17.28■□□□□ 0.36
MACF1-223ENST00000496360 SRGAP3O43295 1099 aa17.28■□□□□ 0.36
MACF1-223ENST00000496360 TXLNAP40222 546 aa17.28■□□□□ 0.36
MACF1-223ENST00000496360 SMARCC2Q8TAQ2 1214 aa17.28■□□□□ 0.36
MACF1-223ENST00000496360 ZFP91Q96JP5 570 aaPredicted RBP17.28■□□□□ 0.36
MACF1-223ENST00000496360 MRFAP1Q9Y605 127 aa17.28■□□□□ 0.36
MACF1-223ENST00000496360 ERLIN1O75477 346 aa17.27■□□□□ 0.36
MACF1-223ENST00000496360 PPP2R3AQ06190 1150 aa17.27■□□□□ 0.36
MACF1-223ENST00000496360 SWT1Q5T5J6 900 aaKnown RBP17.27■□□□□ 0.36
MACF1-223ENST00000496360 MRPS27Q92552 414 aaKnown RBP17.27■□□□□ 0.36
MACF1-223ENST00000496360 GOLPH3LQ9H4A5 285 aa17.27■□□□□ 0.36
MACF1-223ENST00000496360 ATP2B1P20020 1258 aa17.27■□□□□ 0.35
MACF1-223ENST00000496360 LONRF2Q1L5Z9 754 aa17.27■□□□□ 0.35
MACF1-223ENST00000496360 HDXQ7Z353 690 aa17.27■□□□□ 0.35
MACF1-223ENST00000496360 FSIP1Q8NA03 581 aa17.27■□□□□ 0.35
MACF1-223ENST00000496360 KIAA1468Q9P260 1216 aa17.27■□□□□ 0.35
MACF1-223ENST00000496360 USP5P45974 858 aa17.26■□□□□ 0.35
MACF1-223ENST00000496360 CORO7P57737 925 aa17.26■□□□□ 0.35
MACF1-223ENST00000496360 NLRP12P59046 1061 aa17.26■□□□□ 0.35
MACF1-223ENST00000496360 FMR1NBQ8N0W7 255 aaPredicted RBP17.26■□□□□ 0.35
MACF1-223ENST00000496360 PARD6BQ9BYG5 372 aa17.26■□□□□ 0.35
MACF1-223ENST00000496360 ZCCHC17Q9NP64 241 aaKnown RBP17.26■□□□□ 0.35
MACF1-223ENST00000496360 STK32BQ9NY57 414 aa17.26■□□□□ 0.35
MACF1-223ENST00000496360 CLGNO14967 610 aa17.25■□□□□ 0.35
MACF1-223ENST00000496360 NKX1-1Q15270 411 aaPredicted RBP17.25■□□□□ 0.35
MACF1-223ENST00000496360 ADALQ6DHV7 355 aa17.25■□□□□ 0.35
MACF1-223ENST00000496360 CERS3Q8IU89 383 aa17.25■□□□□ 0.35
MACF1-223ENST00000496360 ACBD3Q9H3P7 528 aa17.25■□□□□ 0.35
MACF1-223ENST00000496360 MED23Q9ULK4 1368 aa17.25■□□□□ 0.35
MACF1-223ENST00000496360 APOBRQ0VD83 1088 aa17.25■□□□□ 0.35
MACF1-223ENST00000496360 USPL1Q5W0Q7 1092 aa17.25■□□□□ 0.35
MACF1-223ENST00000496360 EFCAB13Q8IY85 973 aa17.25■□□□□ 0.35
MACF1-223ENST00000496360 SDF4Q9BRK5 362 aa17.25■□□□□ 0.35
MACF1-223ENST00000496360 GBP3Q9H0R5 595 aa17.25■□□□□ 0.35
MACF1-223ENST00000496360 IFIT2P09913 472 aaKnown RBP17.24■□□□□ 0.35
MACF1-223ENST00000496360 SLC27A3Q5K4L6 730 aa17.24■□□□□ 0.35
MACF1-223ENST00000496360 CCDC91Q7Z6B0 441 aa17.24■□□□□ 0.35
MACF1-223ENST00000496360 KDRP35968 1356 aa17.24■□□□□ 0.35
MACF1-223ENST00000496360 FANCCQ00597 558 aa17.24■□□□□ 0.35
MACF1-223ENST00000496360 SLC15A2Q16348 729 aa17.24■□□□□ 0.35
MACF1-223ENST00000496360 RPAINQ86UA6 219 aa17.24■□□□□ 0.35
MACF1-223ENST00000496360 IFNL2Q8IZJ0 200 aa17.24■□□□□ 0.35
MACF1-223ENST00000496360 CCDC34Q96HJ3 373 aa17.24■□□□□ 0.35
MACF1-223ENST00000496360 LRRC4BQ9NT99 713 aa17.24■□□□□ 0.35
MACF1-223ENST00000496360 TOGARAM1Q9Y4F4 1720 aa17.23■□□□□ 0.35
MACF1-223ENST00000496360 PAPPAQ13219 1627 aa17.23■□□□□ 0.35
MACF1-223ENST00000496360 EIF3CLB5ME19 914 aaKnown RBP17.23■□□□□ 0.35
MACF1-223ENST00000496360 PHKG2P15735 406 aa17.23■□□□□ 0.35
MACF1-223ENST00000496360 OS9Q13438 667 aaPredicted RBP17.23■□□□□ 0.35
MACF1-223ENST00000496360 CEP89Q96ST8 783 aa17.23■□□□□ 0.35
MACF1-223ENST00000496360 EIF3CQ99613 913 aaKnown RBP17.23■□□□□ 0.35
MACF1-223ENST00000496360 RAB21Q9UL25 225 aa17.23■□□□□ 0.35
MACF1-223ENST00000496360 RFX7Q2KHR2 1363 aa17.22■□□□□ 0.35
MACF1-223ENST00000496360 VWA3AA6NCI4 1184 aa17.22■□□□□ 0.35
MACF1-223ENST00000496360 NMIQ13287 307 aaPredicted RBP17.22■□□□□ 0.35
MACF1-223ENST00000496360 GNL2Q13823 731 aaKnown RBP17.22■□□□□ 0.35
MACF1-223ENST00000496360 FAM71BQ8TC56 605 aa17.22■□□□□ 0.35
MACF1-223ENST00000496360 UTP14AQ9BVJ6 771 aaKnown RBP17.22■□□□□ 0.35
MACF1-223ENST00000496360 RTEL1Q9NZ71 1219 aa17.22■□□□□ 0.35
MACF1-223ENST00000496360 PPP2R2CQ9Y2T4 447 aa17.22■□□□□ 0.35
MACF1-223ENST00000496360 H3BQF6 201 aa17.22■□□□□ 0.35
MACF1-223ENST00000496360 PFKFB2O60825 505 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms