RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 LDHBP07195 334 aaKnown RBP16.39■□□□□ 0.21
PTPN7-218ENST00000496197 ADGRA1Q86SQ6 560 aa16.39■□□□□ 0.21
PTPN7-218ENST00000496197 KBTBD3Q8NAB2 608 aa16.39■□□□□ 0.21
PTPN7-218ENST00000496197 RILPL2Q969X0 211 aa16.39■□□□□ 0.21
PTPN7-218ENST00000496197 NSUN4Q96CB9 384 aaKnown RBP16.39■□□□□ 0.21
PTPN7-218ENST00000496197 LRP2BPQ9P2M1 347 aa16.39■□□□□ 0.21
PTPN7-218ENST00000496197 TTF2Q9UNY4 1162 aaKnown RBP16.39■□□□□ 0.21
PTPN7-218ENST00000496197 MYO3BQ8WXR4 1341 aa16.39■□□□□ 0.21
PTPN7-218ENST00000496197 EPS15P42566 896 aa16.38■□□□□ 0.21
PTPN7-218ENST00000496197 ERICH6Q7L0X2 663 aa16.38■□□□□ 0.21
PTPN7-218ENST00000496197 MICALL2Q8IY33 904 aa16.38■□□□□ 0.21
PTPN7-218ENST00000496197 RAI14Q9P0K7 980 aa16.38■□□□□ 0.21
PTPN7-218ENST00000496197 TCRBV5S4A2TA0A5A2 114 aa16.37■□□□□ 0.21
PTPN7-218ENST00000496197 RPS12P25398 132 aaKnown RBP16.37■□□□□ 0.21
PTPN7-218ENST00000496197 TTF1Q15361 905 aaPredicted RBP16.37■□□□□ 0.21
PTPN7-218ENST00000496197 DPY19L2Q6NUT2 758 aa16.37■□□□□ 0.21
PTPN7-218ENST00000496197 ZGPATQ8N5A5 531 aaKnown RBP16.37■□□□□ 0.21
PTPN7-218ENST00000496197 EVI5LQ96CN4 794 aa16.37■□□□□ 0.21
PTPN7-218ENST00000496197 L3MBTL3Q96JM7 780 aaPredicted RBP16.37■□□□□ 0.21
PTPN7-218ENST00000496197 GPRC5DQ9NZD1 345 aa16.37■□□□□ 0.21
PTPN7-218ENST00000496197 CNOT7Q9UIV1 285 aaKnown RBP16.37■□□□□ 0.21
PTPN7-218ENST00000496197 FOCADQ5VW36 1801 aa16.37■□□□□ 0.21
PTPN7-218ENST00000496197 USP17L8P0C7I0 530 aa16.36■□□□□ 0.21
PTPN7-218ENST00000496197 PDE6AP16499 860 aa16.36■□□□□ 0.21
PTPN7-218ENST00000496197 MAGEB6Q8N7X4 407 aa16.36■□□□□ 0.21
PTPN7-218ENST00000496197 DPF2Q92785 391 aa16.36■□□□□ 0.21
PTPN7-218ENST00000496197 FSD1Q9BTV5 496 aa16.36■□□□□ 0.21
PTPN7-218ENST00000496197 SUGT1Q9Y2Z0 365 aa16.36■□□□□ 0.21
PTPN7-218ENST00000496197 ADD2P35612 726 aa16.35■□□□□ 0.21
PTPN7-218ENST00000496197 ZNF280AP59817 542 aaPredicted RBP16.35■□□□□ 0.21
PTPN7-218ENST00000496197 BMP2KLQ5H9B9 411 aa16.35■□□□□ 0.21
PTPN7-218ENST00000496197 SLC9C2Q5TAH2 1124 aa16.35■□□□□ 0.21
PTPN7-218ENST00000496197 SPTY2D1Q68D10 685 aaPredicted RBP16.35■□□□□ 0.21
PTPN7-218ENST00000496197 SAMD7Q7Z3H4 446 aa16.35■□□□□ 0.21
PTPN7-218ENST00000496197 DZIP1Q86YF9 867 aaKnown RBP16.35■□□□□ 0.21
PTPN7-218ENST00000496197 CNTROBQ8N137 903 aa16.35■□□□□ 0.21
PTPN7-218ENST00000496197 ZNF526Q8TF50 670 aaPredicted RBP16.35■□□□□ 0.21
PTPN7-218ENST00000496197 ZNF532Q9HCE3 1301 aa16.35■□□□□ 0.21
PTPN7-218ENST00000496197 CRKP46108 304 aa16.35■□□□□ 0.21
PTPN7-218ENST00000496197 TRPM4Q8TD43 1214 aa16.35■□□□□ 0.21
PTPN7-218ENST00000496197 DAGLAQ9Y4D2 1042 aa16.35■□□□□ 0.21
PTPN7-218ENST00000496197 POLR2AP24928 1970 aaKnown RBP16.34■□□□□ 0.21
PTPN7-218ENST00000496197 MAP3K12Q12852 859 aa16.34■□□□□ 0.21
PTPN7-218ENST00000496197 CFAP100Q494V2 611 aa16.34■□□□□ 0.21
PTPN7-218ENST00000496197 NAA16Q6N069 864 aaPredicted RBP16.34■□□□□ 0.21
PTPN7-218ENST00000496197 SEC62Q99442 399 aaKnown RBP16.34■□□□□ 0.21
PTPN7-218ENST00000496197 IL25Q9H293 177 aa16.34■□□□□ 0.21
PTPN7-218ENST00000496197 MYOZ2Q9NPC6 264 aa16.34■□□□□ 0.21
PTPN7-218ENST00000496197 MROH7-TTC4A0A0A0MT08 1334 aa16.34■□□□□ 0.21
PTPN7-218ENST00000496197 GAKO14976 1311 aa16.34■□□□□ 0.21
PTPN7-218ENST00000496197 ASTN2O75129 1339 aaPredicted RBP16.34■□□□□ 0.21
PTPN7-218ENST00000496197 CYP7A1P22680 504 aa16.33■□□□□ 0.2
PTPN7-218ENST00000496197 HIRAP54198 1017 aaPredicted RBP16.33■□□□□ 0.2
PTPN7-218ENST00000496197 TBC1D10BQ4KMP7 808 aaPredicted RBP16.33■□□□□ 0.2
PTPN7-218ENST00000496197 RBM26Q5T8P6 1007 aaKnown RBP16.33■□□□□ 0.2
PTPN7-218ENST00000496197 ZBED3Q96IU2 234 aaPredicted RBP16.33■□□□□ 0.2
PTPN7-218ENST00000496197 FAM227BQ96M60 508 aa16.33■□□□□ 0.2
PTPN7-218ENST00000496197 NMRK2Q9NPI5 230 aa16.33■□□□□ 0.2
PTPN7-218ENST00000496197 SERPINA10Q9UK55 444 aa16.33■□□□□ 0.2
PTPN7-218ENST00000496197 MAST3O60307 1309 aa16.33■□□□□ 0.2
PTPN7-218ENST00000496197 RFX7Q2KHR2 1363 aa16.33■□□□□ 0.2
PTPN7-218ENST00000496197 A0A0D9SFI3 127 aa16.32■□□□□ 0.2
PTPN7-218ENST00000496197 RNF113AO15541 343 aaKnown RBP16.32■□□□□ 0.2
PTPN7-218ENST00000496197 DYNLL1P63167 89 aaKnown RBP16.32■□□□□ 0.2
PTPN7-218ENST00000496197 NBPF9Q3BBW0 867 aa16.32■□□□□ 0.2
PTPN7-218ENST00000496197 APOBEC3HQ6NTF7 200 aaKnown RBP16.32■□□□□ 0.2
PTPN7-218ENST00000496197 HHIPL2Q6UWX4 724 aa16.32■□□□□ 0.2
PTPN7-218ENST00000496197 MIGA1Q8NAN2 632 aa16.32■□□□□ 0.2
PTPN7-218ENST00000496197 OSBP2Q969R2 916 aa16.32■□□□□ 0.2
PTPN7-218ENST00000496197 TEKT1Q969V4 418 aa16.32■□□□□ 0.2
PTPN7-218ENST00000496197 PRMT6Q96LA8 375 aaPredicted RBP16.32■□□□□ 0.2
PTPN7-218ENST00000496197 PUS7LQ9H0K6 701 aaKnown RBP16.32■□□□□ 0.2
PTPN7-218ENST00000496197 RRAGCQ9HB90 399 aa16.32■□□□□ 0.2
PTPN7-218ENST00000496197 DDX60LQ5H9U9 1706 aaKnown RBP16.32■□□□□ 0.2
PTPN7-218ENST00000496197 M0R2C6 588 aa16.31■□□□□ 0.2
PTPN7-218ENST00000496197 WNT10BO00744 389 aa16.31■□□□□ 0.2
PTPN7-218ENST00000496197 RBM5P52756 815 aaKnown RBP eCLIP16.31■□□□□ 0.2
PTPN7-218ENST00000496197 HDLBPQ00341 1268 aaKnown RBP16.31■□□□□ 0.2
PTPN7-218ENST00000496197 NMIQ13287 307 aaPredicted RBP16.31■□□□□ 0.2
PTPN7-218ENST00000496197 UBE3CQ15386 1083 aa16.31■□□□□ 0.2
PTPN7-218ENST00000496197 KIF4BQ2VIQ3 1234 aa16.31■□□□□ 0.2
PTPN7-218ENST00000496197 OGFOD1Q8N543 542 aa16.31■□□□□ 0.2
PTPN7-218ENST00000496197 NAV1Q8NEY1 1877 aa16.31■□□□□ 0.2
PTPN7-218ENST00000496197 FAM163AQ96GL9 167 aaPredicted RBP16.31■□□□□ 0.2
PTPN7-218ENST00000496197 ZDHHC15Q96MV8 337 aa16.31■□□□□ 0.2
PTPN7-218ENST00000496197 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.31■□□□□ 0.26e-7■■■■□ 19.6
PTPN7-218ENST00000496197 HACL1Q9UJ83 578 aa16.31■□□□□ 0.2
PTPN7-218ENST00000496197 HDAC9Q9UKV0 1011 aa16.31■□□□□ 0.2
PTPN7-218ENST00000496197 BAZ2AQ9UIF9 1905 aaKnown RBP16.31■□□□□ 0.2
PTPN7-218ENST00000496197 SPDYE2BA6NHP3 402 aa16.3■□□□□ 0.2
PTPN7-218ENST00000496197 POTEIP0CG38 1075 aa16.3■□□□□ 0.2
PTPN7-218ENST00000496197 POTEJP0CG39 1038 aa16.3■□□□□ 0.2
PTPN7-218ENST00000496197 SPDYE6P0CI01 402 aa16.3■□□□□ 0.2
PTPN7-218ENST00000496197 LMOD1P29536 600 aaPredicted RBP16.3■□□□□ 0.2
PTPN7-218ENST00000496197 EPHX2P34913 555 aa16.3■□□□□ 0.2
PTPN7-218ENST00000496197 BTDP43251 543 aa16.3■□□□□ 0.2
PTPN7-218ENST00000496197 ZMYM1Q5SVZ6 1142 aa16.3■□□□□ 0.2
PTPN7-218ENST00000496197 MTMR14Q8NCE2 650 aa16.3■□□□□ 0.2
PTPN7-218ENST00000496197 RIOK1Q9BRS2 568 aaKnown RBP16.3■□□□□ 0.2
PTPN7-218ENST00000496197 MRIQ9BWK5 157 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms