RNA–Protein interactions for RNA: ENST00000495787.1

ECHDC3-204, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 3

Gene ECHDC3, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-204ENST00000495787 WBP1LQ9NX94 342 aa12.87□□□□□ -0.35
ECHDC3-204ENST00000495787 PODXL2Q9NZ53 605 aa12.87□□□□□ -0.35
ECHDC3-204ENST00000495787 PALD1Q9ULE6 856 aa12.87□□□□□ -0.35
ECHDC3-204ENST00000495787 RBM8AQ9Y5S9 174 aaKnown RBP12.87□□□□□ -0.35
ECHDC3-204ENST00000495787 PDS5AQ29RF7 1337 aaKnown RBP12.87□□□□□ -0.35
ECHDC3-204ENST00000495787 SCN4AP35499 1836 aa12.86□□□□□ -0.35
ECHDC3-204ENST00000495787 PPEF1O14829 653 aaPredicted RBP12.86□□□□□ -0.35
ECHDC3-204ENST00000495787 LBX1P52954 281 aa12.86□□□□□ -0.35
ECHDC3-204ENST00000495787 GPSM2P81274 684 aa12.86□□□□□ -0.35
ECHDC3-204ENST00000495787 MAP3K12Q12852 859 aa12.86□□□□□ -0.35
ECHDC3-204ENST00000495787 WASHC4Q2M389 1173 aa12.86□□□□□ -0.35
ECHDC3-204ENST00000495787 CCDC129Q6ZRS4 1044 aa12.86□□□□□ -0.35
ECHDC3-204ENST00000495787 DSCC1Q9BVC3 393 aa12.86□□□□□ -0.35
ECHDC3-204ENST00000495787 SNX14Q9Y5W7 946 aa12.86□□□□□ -0.35
ECHDC3-204ENST00000495787 U3KPZ7 1027 aaPredicted RBP12.86□□□□□ -0.35
ECHDC3-204ENST00000495787 MAST3O60307 1309 aa12.86□□□□□ -0.35
ECHDC3-204ENST00000495787 LTBP1Q14766 1721 aa12.85□□□□□ -0.35
ECHDC3-204ENST00000495787 CACNA1SQ13698 1873 aa12.85□□□□□ -0.35
ECHDC3-204ENST00000495787 M0R2C6 588 aa12.85□□□□□ -0.35
ECHDC3-204ENST00000495787 ST18O60284 1047 aa12.85□□□□□ -0.35
ECHDC3-204ENST00000495787 IDH1O75874 414 aaKnown RBP12.85□□□□□ -0.35
ECHDC3-204ENST00000495787 ITGBL1O95965 494 aaPredicted RBP12.85□□□□□ -0.35
ECHDC3-204ENST00000495787 PDE6AP16499 860 aa12.85□□□□□ -0.35
ECHDC3-204ENST00000495787 KLRK1P26718 216 aa12.85□□□□□ -0.35
ECHDC3-204ENST00000495787 SLFNL1Q499Z3 407 aa12.85□□□□□ -0.35
ECHDC3-204ENST00000495787 SLC9C2Q5TAH2 1124 aa12.85□□□□□ -0.35
ECHDC3-204ENST00000495787 RNF20Q5VTR2 975 aa12.85□□□□□ -0.35
ECHDC3-204ENST00000495787 CREB3L3Q68CJ9 461 aa12.85□□□□□ -0.35
ECHDC3-204ENST00000495787 OSBP2Q969R2 916 aa12.85□□□□□ -0.35
ECHDC3-204ENST00000495787 GGA1Q9UJY5 639 aa12.85□□□□□ -0.35
ECHDC3-204ENST00000495787 ATP6V0A2Q9Y487 856 aa12.85□□□□□ -0.35
ECHDC3-204ENST00000495787 SLX4Q8IY92 1834 aa12.84□□□□□ -0.35
ECHDC3-204ENST00000495787 SLC27A2O14975 620 aa12.84□□□□□ -0.35
ECHDC3-204ENST00000495787 ZKSCAN1P17029 563 aaPredicted RBP12.84□□□□□ -0.35
ECHDC3-204ENST00000495787 CCDC93Q567U6 631 aa12.84□□□□□ -0.35
ECHDC3-204ENST00000495787 EAPPQ56P03 285 aaPredicted RBP12.84□□□□□ -0.35
ECHDC3-204ENST00000495787 RASEFQ8IZ41 740 aa12.84□□□□□ -0.35
ECHDC3-204ENST00000495787 ABHD8Q96I13 439 aa12.84□□□□□ -0.35
ECHDC3-204ENST00000495787 NSFL1CQ9UNZ2 370 aaKnown RBP12.84□□□□□ -0.35
ECHDC3-204ENST00000495787 IQSEC3Q9UPP2 1182 aaPredicted RBP12.84□□□□□ -0.35
ECHDC3-204ENST00000495787 ZNF532Q9HCE3 1301 aa12.84□□□□□ -0.35
ECHDC3-204ENST00000495787 COL1A1P02452 1464 aaPredicted RBP12.84□□□□□ -0.35
ECHDC3-204ENST00000495787 TCRBV5S4A2TA0A5A2 114 aa12.83□□□□□ -0.36
ECHDC3-204ENST00000495787 RASSF10A6NK89 507 aa12.83□□□□□ -0.36
ECHDC3-204ENST00000495787 K7ELQ4 463 aaPredicted RBP12.83□□□□□ -0.36
ECHDC3-204ENST00000495787 IGSF3O75054 1194 aa12.83□□□□□ -0.36
ECHDC3-204ENST00000495787 FRAT2O75474 233 aaPredicted RBP12.83□□□□□ -0.36
ECHDC3-204ENST00000495787 UFL1O94874 794 aa12.83□□□□□ -0.36
ECHDC3-204ENST00000495787 HSPA8P11142 646 aaKnown RBP12.83□□□□□ -0.36
ECHDC3-204ENST00000495787 MAP2K1Q02750 393 aaPredicted RBP12.83□□□□□ -0.36
ECHDC3-204ENST00000495787 DEFB115Q30KQ5 88 aa12.83□□□□□ -0.36
ECHDC3-204ENST00000495787 TSGA10IPQ3SY00 556 aa12.83□□□□□ -0.36
ECHDC3-204ENST00000495787 ERICH6Q7L0X2 663 aa12.83□□□□□ -0.36
ECHDC3-204ENST00000495787 ZNF804AQ7Z570 1209 aa12.83□□□□□ -0.36
ECHDC3-204ENST00000495787 PNMA8AQ86V59 439 aaPredicted RBP12.83□□□□□ -0.36
ECHDC3-204ENST00000495787 TXNRD3Q86VQ6 643 aa12.83□□□□□ -0.36
ECHDC3-204ENST00000495787 TM6SF1Q9BZW5 370 aa12.83□□□□□ -0.36
ECHDC3-204ENST00000495787 PUS7LQ9H0K6 701 aaKnown RBP12.83□□□□□ -0.36
ECHDC3-204ENST00000495787 LRP2BPQ9P2M1 347 aa12.83□□□□□ -0.36
ECHDC3-204ENST00000495787 HACL1Q9UJ83 578 aa12.83□□□□□ -0.36
ECHDC3-204ENST00000495787 CLEC11AQ9Y240 323 aa12.83□□□□□ -0.36
ECHDC3-204ENST00000495787 CD2BP2O95400 341 aaKnown RBP12.82□□□□□ -0.36
ECHDC3-204ENST00000495787 HSPD1P10809 573 aaKnown RBP12.82□□□□□ -0.36
ECHDC3-204ENST00000495787 EPHX2P34913 555 aa12.82□□□□□ -0.36
ECHDC3-204ENST00000495787 MCM2P49736 904 aa12.82□□□□□ -0.36
ECHDC3-204ENST00000495787 NEK4P51957 841 aa12.82□□□□□ -0.36
ECHDC3-204ENST00000495787 SLC51AQ86UW1 340 aa12.82□□□□□ -0.36
ECHDC3-204ENST00000495787 MAGEB6Q8N7X4 407 aa12.82□□□□□ -0.36
ECHDC3-204ENST00000495787 TDRD7Q8NHU6 1098 aaKnown RBP12.82□□□□□ -0.36
ECHDC3-204ENST00000495787 TBC1D16Q8TBP0 767 aa12.82□□□□□ -0.36
ECHDC3-204ENST00000495787 C7orf43Q8WVR3 580 aa12.82□□□□□ -0.36
ECHDC3-204ENST00000495787 TMX4Q9H1E5 349 aaPredicted RBP12.82□□□□□ -0.36
ECHDC3-204ENST00000495787 MAST2Q6P0Q8 1798 aa12.81□□□□□ -0.36
ECHDC3-204ENST00000495787 GPAA1O43292 621 aa12.81□□□□□ -0.36
ECHDC3-204ENST00000495787 PSMA5P28066 241 aa12.81□□□□□ -0.36
ECHDC3-204ENST00000495787 KRT32Q14532 448 aa12.81□□□□□ -0.36
ECHDC3-204ENST00000495787 VPS53Q5VIR6 699 aa12.81□□□□□ -0.36
ECHDC3-204ENST00000495787 TMED8Q6PL24 325 aaPredicted RBP12.81□□□□□ -0.36
ECHDC3-204ENST00000495787 MPNDQ8N594 471 aa12.81□□□□□ -0.36
ECHDC3-204ENST00000495787 ABCF2Q9UG63 623 aa12.81□□□□□ -0.36
ECHDC3-204ENST00000495787 POLLQ9UGP5 575 aa12.81□□□□□ -0.36
ECHDC3-204ENST00000495787 CTNNA3Q9UI47 895 aa12.81□□□□□ -0.36
ECHDC3-204ENST00000495787 WDR33Q9C0J8 1336 aaKnown RBP12.81□□□□□ -0.36
ECHDC3-204ENST00000495787 ZNF541Q9H0D2 1346 aa12.81□□□□□ -0.36
ECHDC3-204ENST00000495787 SALL1Q9NSC2 1324 aa12.81□□□□□ -0.36
ECHDC3-204ENST00000495787 DUOX1Q9NRD9 1551 aa12.81□□□□□ -0.36
ECHDC3-204ENST00000495787 ADAMTSL1Q8N6G6 1762 aa12.8□□□□□ -0.36
ECHDC3-204ENST00000495787 C6orf229H3BNL8 230 aa12.8□□□□□ -0.36
ECHDC3-204ENST00000495787 MAP1SQ66K74 1059 aaPredicted RBP12.8□□□□□ -0.36
ECHDC3-204ENST00000495787 SPTY2D1Q68D10 685 aaPredicted RBP12.8□□□□□ -0.36
ECHDC3-204ENST00000495787 ZGPATQ8N5A5 531 aaKnown RBP12.8□□□□□ -0.36
ECHDC3-204ENST00000495787 WDR66Q8TBY9 1149 aa12.8□□□□□ -0.36
ECHDC3-204ENST00000495787 JAKMIP1Q96N16 626 aaKnown RBP12.8□□□□□ -0.36
ECHDC3-204ENST00000495787 ZSWIM6Q9HCJ5 1215 aa12.8□□□□□ -0.36
ECHDC3-204ENST00000495787 RAI14Q9P0K7 980 aa12.8□□□□□ -0.36
ECHDC3-204ENST00000495787 ABT1Q9ULW3 272 aaKnown RBP12.8□□□□□ -0.36
ECHDC3-204ENST00000495787 RPAP1Q9BWH6 1393 aaPredicted RBP12.8□□□□□ -0.36
ECHDC3-204ENST00000495787 IL1R1P14778 569 aa12.79□□□□□ -0.36
ECHDC3-204ENST00000495787 CASTP20810 708 aaKnown RBP12.79□□□□□ -0.36
ECHDC3-204ENST00000495787 CYP7A1P22680 504 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms