RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 HOMER1Q86YM7 354 aa17.77■□□□□ 0.44
SDF4-207ENST00000494748 SRRTQ9BXP5 876 aaKnown RBP17.77■□□□□ 0.44
SDF4-207ENST00000494748 ISM2Q6H9L7 571 aa17.77■□□□□ 0.44
SDF4-207ENST00000494748 KIF23Q02241 960 aaPredicted RBP17.77■□□□□ 0.43
SDF4-207ENST00000494748 CC2D1AQ6P1N0 951 aaPredicted RBP17.77■□□□□ 0.43
SDF4-207ENST00000494748 RSRC2Q7L4I2 434 aaKnown RBP17.77■□□□□ 0.43
SDF4-207ENST00000494748 ARHGEF25Q86VW2 580 aa17.77■□□□□ 0.43
SDF4-207ENST00000494748 ATP8B1O43520 1251 aa17.76■□□□□ 0.43
SDF4-207ENST00000494748 TBX2Q13207 712 aaPredicted RBP17.76■□□□□ 0.43
SDF4-207ENST00000494748 ANO1Q5XXA6 986 aa17.76■□□□□ 0.43
SDF4-207ENST00000494748 FCHSD1Q86WN1 690 aa17.76■□□□□ 0.43
SDF4-207ENST00000494748 UTP14AQ9BVJ6 771 aaKnown RBP17.76■□□□□ 0.43
SDF4-207ENST00000494748 MAP3K9P80192 1104 aa17.76■□□□□ 0.43
SDF4-207ENST00000494748 BRAPQ7Z569 592 aa17.76■□□□□ 0.43
SDF4-207ENST00000494748 KCNH5Q8NCM2 988 aa17.76■□□□□ 0.43
SDF4-207ENST00000494748 NEK11Q8NG66 645 aa17.76■□□□□ 0.43
SDF4-207ENST00000494748 SMARCE1Q969G3 411 aa17.76■□□□□ 0.43
SDF4-207ENST00000494748 C8orf76Q96K31 380 aa17.76■□□□□ 0.43
SDF4-207ENST00000494748 WDR24Q96S15 920 aa17.76■□□□□ 0.43
SDF4-207ENST00000494748 FAM237AA0A1B0GTK4 181 aa17.76■□□□□ 0.43
SDF4-207ENST00000494748 CCP110O43303 1012 aa17.76■□□□□ 0.43
SDF4-207ENST00000494748 FOXO4P98177 505 aa17.76■□□□□ 0.43
SDF4-207ENST00000494748 TICAM2Q86XR7 235 aa17.76■□□□□ 0.43
SDF4-207ENST00000494748 KIFC2Q96AC6 838 aa17.76■□□□□ 0.43
SDF4-207ENST00000494748 NAP1L2Q9ULW6 460 aaPredicted RBP17.76■□□□□ 0.43
SDF4-207ENST00000494748 TRPM3Q9HCF6 1732 aaPredicted RBP17.75■□□□□ 0.43
SDF4-207ENST00000494748 ANTXR2P58335 489 aa17.75■□□□□ 0.43
SDF4-207ENST00000494748 ANKRD13DQ6ZTN6 518 aa17.75■□□□□ 0.43
SDF4-207ENST00000494748 ZCCHC17Q9NP64 241 aaKnown RBP17.75■□□□□ 0.43
SDF4-207ENST00000494748 URI1O94763 535 aaPredicted RBP17.75■□□□□ 0.43
SDF4-207ENST00000494748 UBASH3AP57075 661 aa17.75■□□□□ 0.43
SDF4-207ENST00000494748 SHC4Q6S5L8 630 aa17.75■□□□□ 0.43
SDF4-207ENST00000494748 CCDC9Q9Y3X0 531 aaKnown RBP17.75■□□□□ 0.43
SDF4-207ENST00000494748 PIP4K2AP48426 406 aaPredicted RBP17.75■□□□□ 0.43
SDF4-207ENST00000494748 RAD51AP2Q09MP3 1159 aa17.75■□□□□ 0.43
SDF4-207ENST00000494748 SF3A1Q15459 793 aaKnown RBP17.75■□□□□ 0.43
SDF4-207ENST00000494748 MB21D2Q8IYB1 491 aaPredicted RBP17.75■□□□□ 0.43
SDF4-207ENST00000494748 AXIN2Q9Y2T1 843 aa17.75■□□□□ 0.43
SDF4-207ENST00000494748 PPP2R2CQ9Y2T4 447 aa17.75■□□□□ 0.43
SDF4-207ENST00000494748 BMP6P22004 513 aa17.74■□□□□ 0.43
SDF4-207ENST00000494748 SLC39A14Q15043 492 aa17.74■□□□□ 0.43
SDF4-207ENST00000494748 MUM1L1Q5H9M0 696 aa17.74■□□□□ 0.43
SDF4-207ENST00000494748 FOXP4Q8IVH2 680 aaPredicted RBP17.74■□□□□ 0.43
SDF4-207ENST00000494748 ANKRD24Q8TF21 1146 aa17.74■□□□□ 0.43
SDF4-207ENST00000494748 OSBP2Q969R2 916 aa17.74■□□□□ 0.43
SDF4-207ENST00000494748 ARGLU1Q9NWB6 273 aaPredicted RBP17.74■□□□□ 0.43
SDF4-207ENST00000494748 MRFAP1Q9Y605 127 aa17.74■□□□□ 0.43
SDF4-207ENST00000494748 VGLL3A8MV65 326 aa17.74■□□□□ 0.43
SDF4-207ENST00000494748 POLR3GO15318 223 aaPredicted RBP17.74■□□□□ 0.43
SDF4-207ENST00000494748 TPM4P67936 248 aa17.74■□□□□ 0.43
SDF4-207ENST00000494748 MYL5Q02045 173 aa17.74■□□□□ 0.43
SDF4-207ENST00000494748 PTPAQ15257 358 aa17.74■□□□□ 0.43
SDF4-207ENST00000494748 CDC27P30260 824 aa17.73■□□□□ 0.43
SDF4-207ENST00000494748 RNF113AO15541 343 aaKnown RBP17.73■□□□□ 0.43
SDF4-207ENST00000494748 TIMM10P62072 90 aa17.73■□□□□ 0.43
SDF4-207ENST00000494748 PNOCQ13519 176 aa17.73■□□□□ 0.43
SDF4-207ENST00000494748 METTL16Q86W50 562 aaKnown RBP17.73■□□□□ 0.43
SDF4-207ENST00000494748 OAS2P29728 719 aaKnown RBP17.73■□□□□ 0.43
SDF4-207ENST00000494748 PDE4BQ07343 736 aa17.73■□□□□ 0.43
SDF4-207ENST00000494748 MNS1Q8NEH6 495 aa17.73■□□□□ 0.43
SDF4-207ENST00000494748 NKX2-3Q8TAU0 364 aa17.73■□□□□ 0.43
SDF4-207ENST00000494748 FUT8Q9BYC5 575 aa17.73■□□□□ 0.43
SDF4-207ENST00000494748 SLC52A2Q9HAB3 445 aa17.73■□□□□ 0.43
SDF4-207ENST00000494748 FEZ2Q9UHY8 353 aaPredicted RBP17.73■□□□□ 0.43
SDF4-207ENST00000494748 ZRSR1Q15695 479 aaKnown RBP17.72■□□□□ 0.43
SDF4-207ENST00000494748 ZNF496Q96IT1 587 aaPredicted RBP17.72■□□□□ 0.43
SDF4-207ENST00000494748 MAP3K14Q99558 947 aa17.72■□□□□ 0.43
SDF4-207ENST00000494748 PKD1L3Q7Z443 1732 aa17.72■□□□□ 0.43
SDF4-207ENST00000494748 PARP4Q9UKK3 1724 aaKnown RBP17.72■□□□□ 0.43
SDF4-207ENST00000494748 ATP5J2-PTCD1G3V325 749 aa17.72■□□□□ 0.43
SDF4-207ENST00000494748 PTCD1O75127 700 aaKnown RBP17.72■□□□□ 0.43
SDF4-207ENST00000494748 MARCKSP29966 332 aaPredicted RBP17.72■□□□□ 0.43
SDF4-207ENST00000494748 MPHOSPH8Q99549 860 aa17.72■□□□□ 0.43
SDF4-207ENST00000494748 GPR108Q9NPR9 543 aa17.72■□□□□ 0.43
SDF4-207ENST00000494748 MYO5AQ9Y4I1 1855 aaKnown RBP17.72■□□□□ 0.43
SDF4-207ENST00000494748 LMBR1LQ6UX01 489 aa17.72■□□□□ 0.43
SDF4-207ENST00000494748 FANCLQ9NW38 375 aa17.72■□□□□ 0.43
SDF4-207ENST00000494748 ARHGAP6O43182 974 aa17.71■□□□□ 0.43
SDF4-207ENST00000494748 NRDCO43847 1150 aa17.71■□□□□ 0.43
SDF4-207ENST00000494748 TOGARAM2Q6ZUX3 1019 aa17.71■□□□□ 0.43
SDF4-207ENST00000494748 GPR161Q8N6U8 529 aaKnown RBP17.71■□□□□ 0.43
SDF4-207ENST00000494748 A0A087WZG4 1122 aa17.71■□□□□ 0.43
SDF4-207ENST00000494748 KLF18A0A0U1RQI7 1052 aa17.71■□□□□ 0.43
SDF4-207ENST00000494748 GCP02774 474 aa17.71■□□□□ 0.43
SDF4-207ENST00000494748 TPM1P09493 284 aa17.71■□□□□ 0.43
SDF4-207ENST00000494748 RAB11FIP4Q86YS3 637 aa17.71■□□□□ 0.43
SDF4-207ENST00000494748 TC2NQ8N9U0 490 aa17.71■□□□□ 0.43
SDF4-207ENST00000494748 AIFM3Q96NN9 605 aa17.71■□□□□ 0.43
SDF4-207ENST00000494748 SYKP43405 635 aa17.71■□□□□ 0.42
SDF4-207ENST00000494748 SMC1AQ14683 1233 aaKnown RBP17.71■□□□□ 0.42
SDF4-207ENST00000494748 AKAP11Q9UKA4 1901 aa17.7■□□□□ 0.42
SDF4-207ENST00000494748 CBFA2T2O43439 604 aa17.7■□□□□ 0.42
SDF4-207ENST00000494748 RESP18Q5W5W9 173 aa17.7■□□□□ 0.42
SDF4-207ENST00000494748 RGS22Q8NE09 1264 aa17.7■□□□□ 0.42
SDF4-207ENST00000494748 GOLGA8BA8MQT2 603 aa17.7■□□□□ 0.42
SDF4-207ENST00000494748 PRC1O43663 620 aa17.7■□□□□ 0.42
SDF4-207ENST00000494748 SERPINC1P01008 464 aa17.7■□□□□ 0.42
SDF4-207ENST00000494748 MDM2Q00987 491 aaPredicted RBP17.7■□□□□ 0.42
SDF4-207ENST00000494748 CFAP100Q494V2 611 aa17.7■□□□□ 0.42
SDF4-207ENST00000494748 CHMP4CQ96CF2 233 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms