RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 VN1R5Q7Z5H4 357 aa9.22□□□□□ -0.93
SMC2-205ENST00000493955 SLITRK4Q8IW52 837 aa9.22□□□□□ -0.93
SMC2-205ENST00000493955 LRRC3Q9BY71 257 aa9.22□□□□□ -0.93
SMC2-205ENST00000493955 ADAM19Q9H013 955 aa9.22□□□□□ -0.93
SMC2-205ENST00000493955 SMG9Q9H0W8 520 aaKnown RBP9.22□□□□□ -0.93
SMC2-205ENST00000493955 MIR1-1HGQ9H1L0 117 aa9.22□□□□□ -0.93
SMC2-205ENST00000493955 FAM177BA6PVY3 158 aa9.21□□□□□ -0.94
SMC2-205ENST00000493955 ADARB2-AS1A8MUL3 147 aa9.21□□□□□ -0.94
SMC2-205ENST00000493955 PIF1Q9H611 641 aa9.21□□□□□ -0.94
SMC2-205ENST00000493955 FRRS1LQ9P0K9 344 aa9.21□□□□□ -0.94
SMC2-205ENST00000493955 CYP8B1Q9UNU6 501 aa9.21□□□□□ -0.94
SMC2-205ENST00000493955 F13A1P00488 732 aa9.2□□□□□ -0.94
SMC2-205ENST00000493955 HMGB1P09429 215 aaKnown RBP9.2□□□□□ -0.94
SMC2-205ENST00000493955 BMP6P22004 513 aa9.2□□□□□ -0.94
SMC2-205ENST00000493955 ZNF423Q2M1K9 1284 aa9.2□□□□□ -0.94
SMC2-205ENST00000493955 ADAMTSL4Q6UY14 1074 aa9.2□□□□□ -0.94
SMC2-205ENST00000493955 BNC2Q6ZN30 1099 aaPredicted RBP9.2□□□□□ -0.94
SMC2-205ENST00000493955 SULF2Q8IWU5 870 aa9.2□□□□□ -0.94
SMC2-205ENST00000493955 CPLX3Q8WVH0 158 aa9.2□□□□□ -0.94
SMC2-205ENST00000493955 GATAD2BQ8WXI9 593 aa9.2□□□□□ -0.94
SMC2-205ENST00000493955 LPIN3Q9BQK8 851 aa9.2□□□□□ -0.94
SMC2-205ENST00000493955 LACRTQ9GZZ8 138 aa9.2□□□□□ -0.94
SMC2-205ENST00000493955 KLF15Q9UIH9 416 aa9.2□□□□□ -0.94
SMC2-205ENST00000493955 TRIM33Q9UPN9 1127 aa9.2□□□□□ -0.94
SMC2-205ENST00000493955 PCDHB5Q9Y5E4 795 aa9.2□□□□□ -0.94
SMC2-205ENST00000493955 MRVI1Q9Y6F6 885 aa9.2□□□□□ -0.94
SMC2-205ENST00000493955 ETFBP38117 255 aa9.19□□□□□ -0.94
SMC2-205ENST00000493955 BMS1Q14692 1282 aaKnown RBP9.19□□□□□ -0.94
SMC2-205ENST00000493955 LRRC14Q15048 493 aa9.19□□□□□ -0.94
SMC2-205ENST00000493955 SEZ6Q53EL9 994 aa9.19□□□□□ -0.94
SMC2-205ENST00000493955 RASIP1Q5U651 963 aa9.19□□□□□ -0.94
SMC2-205ENST00000493955 DIEXFQ68CQ4 756 aaKnown RBP9.19□□□□□ -0.94
SMC2-205ENST00000493955 MDFIQ99750 246 aa9.19□□□□□ -0.94
SMC2-205ENST00000493955 SRRTQ9BXP5 876 aaKnown RBP9.19□□□□□ -0.94
SMC2-205ENST00000493955 ESRRAP11474 423 aaPredicted RBP9.18□□□□□ -0.94
SMC2-205ENST00000493955 HSP90B1P14625 803 aaKnown RBP9.18□□□□□ -0.94
SMC2-205ENST00000493955 SERINC3Q13530 473 aa9.18□□□□□ -0.94
SMC2-205ENST00000493955 MPP2Q14168 576 aa9.18□□□□□ -0.94
SMC2-205ENST00000493955 GAS6Q14393 721 aa9.18□□□□□ -0.94
SMC2-205ENST00000493955 NFE2L2Q16236 605 aa9.18□□□□□ -0.94
SMC2-205ENST00000493955 LLGL2Q6P1M3 1020 aa9.18□□□□□ -0.94
SMC2-205ENST00000493955 NSFL1CQ9UNZ2 370 aaKnown RBP9.18□□□□□ -0.94
SMC2-205ENST00000493955 FAM221AA4D161 298 aa9.17□□□□□ -0.94
SMC2-205ENST00000493955 TLR3O15455 904 aaKnown RBP9.17□□□□□ -0.94
SMC2-205ENST00000493955 MAP2K3P46734 347 aa9.17□□□□□ -0.94
SMC2-205ENST00000493955 CABP4P57796 275 aa9.17□□□□□ -0.94
SMC2-205ENST00000493955 SEPT6Q14141 434 aa9.17□□□□□ -0.94
SMC2-205ENST00000493955 CWF19L2Q2TBE0 894 aaKnown RBP9.17□□□□□ -0.94
SMC2-205ENST00000493955 PSAPL1Q6NUJ1 521 aa9.17□□□□□ -0.94
SMC2-205ENST00000493955 ANKS3Q6ZW76 656 aa9.17□□□□□ -0.94
SMC2-205ENST00000493955 FCHSD1Q86WN1 690 aa9.17□□□□□ -0.94
SMC2-205ENST00000493955 FBXO27Q8NI29 283 aa9.17□□□□□ -0.94
SMC2-205ENST00000493955 DDX54Q8TDD1 881 aaKnown RBP9.17□□□□□ -0.94
SMC2-205ENST00000493955 JARID2Q92833 1246 aaPredicted RBP9.17□□□□□ -0.94
SMC2-205ENST00000493955 EMILIN2Q9BXX0 1053 aa9.17□□□□□ -0.94
SMC2-205ENST00000493955 TLDC2A0PJX2 215 aa9.16□□□□□ -0.94
SMC2-205ENST00000493955 ARNTP27540 789 aa9.16□□□□□ -0.94
SMC2-205ENST00000493955 CDC27P30260 824 aa9.16□□□□□ -0.94
SMC2-205ENST00000493955 IKBKEQ14164 716 aa9.16□□□□□ -0.94
SMC2-205ENST00000493955 CACTIN-AS1Q8N1I8 211 aa9.16□□□□□ -0.94
SMC2-205ENST00000493955 STK35Q8TDR2 534 aa9.16□□□□□ -0.94
SMC2-205ENST00000493955 TTC9Q92623 222 aa9.16□□□□□ -0.94
SMC2-205ENST00000493955 ANAPC16Q96DE5 110 aa9.16□□□□□ -0.94
SMC2-205ENST00000493955 CBX8Q9HC52 389 aa9.16□□□□□ -0.94
SMC2-205ENST00000493955 SH2B1Q9NRF2 756 aaPredicted RBP9.16□□□□□ -0.94
SMC2-205ENST00000493955 PPT2Q9UMR5 302 aa9.16□□□□□ -0.94
SMC2-205ENST00000493955 ELOA3CA0A087WX78 387 aaPredicted RBP9.15□□□□□ -0.94
SMC2-205ENST00000493955 ELOA3DA6NLF2 546 aaPredicted RBP9.15□□□□□ -0.94
SMC2-205ENST00000493955 NEURL1BA8MQ27 555 aa9.15□□□□□ -0.94
SMC2-205ENST00000493955 K7ELQ4 463 aaPredicted RBP9.15□□□□□ -0.94
SMC2-205ENST00000493955 CILPO75339 1184 aa9.15□□□□□ -0.94
SMC2-205ENST00000493955 EPHA1P21709 976 aa9.15□□□□□ -0.94
SMC2-205ENST00000493955 ELOA3BQ3SY89 546 aa9.15□□□□□ -0.94
SMC2-205ENST00000493955 GDF6Q6KF10 455 aaPredicted RBP9.15□□□□□ -0.94
SMC2-205ENST00000493955 CCDC81Q6ZN84 652 aa9.15□□□□□ -0.94
SMC2-205ENST00000493955 ELOA3Q8NG57 546 aa9.15□□□□□ -0.94
SMC2-205ENST00000493955 GAL3ST3Q96A11 431 aa9.15□□□□□ -0.94
SMC2-205ENST00000493955 SHDQ96IW2 340 aa9.15□□□□□ -0.94
SMC2-205ENST00000493955 TRIM55Q9BYV6 548 aa9.15□□□□□ -0.94
SMC2-205ENST00000493955 MBIPQ9NS73 344 aa9.15□□□□□ -0.94
SMC2-205ENST00000493955 PRKAG3Q9UGI9 489 aa9.15□□□□□ -0.94
SMC2-205ENST00000493955 CDK11AQ9UQ88 783 aaPredicted RBP9.15□□□□□ -0.94
SMC2-205ENST00000493955 TBX22Q9Y458 520 aa9.15□□□□□ -0.94
SMC2-205ENST00000493955 KLF4O43474 513 aa9.14□□□□□ -0.95
SMC2-205ENST00000493955 BPNT1O95861 308 aa9.14□□□□□ -0.95
SMC2-205ENST00000493955 SCARA3Q6AZY7 606 aa9.14□□□□□ -0.95
SMC2-205ENST00000493955 ZNF746Q6NUN9 644 aaPredicted RBP9.14□□□□□ -0.95
SMC2-205ENST00000493955 REC114Q7Z4M0 266 aa9.14□□□□□ -0.95
SMC2-205ENST00000493955 MRFAP1L1Q96HT8 127 aa9.14□□□□□ -0.95
SMC2-205ENST00000493955 SIRPGQ9P1W8 387 aa9.14□□□□□ -0.95
SMC2-205ENST00000493955 H3BRJ5 948 aa9.14□□□□□ -0.95
SMC2-205ENST00000493955 U2SURPO15042 1029 aaKnown RBP9.14□□□□□ -0.95
SMC2-205ENST00000493955 RGS9O75916 674 aaPredicted RBP9.14□□□□□ -0.95
SMC2-205ENST00000493955 MCM4P33991 863 aa9.14□□□□□ -0.95
SMC2-205ENST00000493955 ZNF165P49910 485 aa9.14□□□□□ -0.95
SMC2-205ENST00000493955 ZNF252P-AS1Q0IIN9 211 aa9.14□□□□□ -0.95
SMC2-205ENST00000493955 AP3B2Q13367 1082 aa9.14□□□□□ -0.95
SMC2-205ENST00000493955 RAB33AQ14088 237 aa9.14□□□□□ -0.95
SMC2-205ENST00000493955 GRIN3AQ8TCU5 1115 aa9.14□□□□□ -0.95
SMC2-205ENST00000493955 HNRNPLLQ8WVV9 542 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms