RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 ZNF804AQ7Z570 1209 aa10.17□□□□□ -0.78
HDAC6-234ENST00000493923 OGFOD1Q8N543 542 aa10.17□□□□□ -0.78
HDAC6-234ENST00000493923 TDRD7Q8NHU6 1098 aaKnown RBP10.17□□□□□ -0.78
HDAC6-234ENST00000493923 CCDC102AQ96A19 550 aa10.17□□□□□ -0.78
HDAC6-234ENST00000493923 ZMYND15Q9H091 742 aa10.17□□□□□ -0.78
HDAC6-234ENST00000493923 R3HDMLQ9H3Y0 253 aa10.17□□□□□ -0.78
HDAC6-234ENST00000493923 TNNQ9UQP3 1299 aa10.17□□□□□ -0.78
HDAC6-234ENST00000493923 ARAP2Q8WZ64 1704 aa10.16□□□□□ -0.78
HDAC6-234ENST00000493923 UBE4AQ14139 1066 aa10.16□□□□□ -0.78
HDAC6-234ENST00000493923 TTLL12Q14166 644 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-234ENST00000493923 DLGAP5Q15398 846 aa10.16□□□□□ -0.78
HDAC6-234ENST00000493923 FBXO33Q7Z6M2 555 aa10.16□□□□□ -0.78
HDAC6-234ENST00000493923 MTMR14Q8NCE2 650 aa10.16□□□□□ -0.78
HDAC6-234ENST00000493923 CLMNQ96JQ2 1002 aa10.16□□□□□ -0.78
HDAC6-234ENST00000493923 OTOFQ9HC10 1997 aa10.15□□□□□ -0.78
HDAC6-234ENST00000493923 PTPRCP08575 1304 aa10.15□□□□□ -0.78
HDAC6-234ENST00000493923 CA12O43570 354 aa10.15□□□□□ -0.78
HDAC6-234ENST00000493923 HIBADHP31937 336 aaKnown RBP10.15□□□□□ -0.78
HDAC6-234ENST00000493923 BCAMP50895 628 aa10.15□□□□□ -0.78
HDAC6-234ENST00000493923 FKBP1BP68106 108 aa10.15□□□□□ -0.78
HDAC6-234ENST00000493923 DGKZQ13574 1117 aa10.15□□□□□ -0.78
HDAC6-234ENST00000493923 LDLRAD1Q5T700 205 aa10.15□□□□□ -0.78
HDAC6-234ENST00000493923 NBPF12Q5TAG4 269 aaPredicted RBP10.15□□□□□ -0.78
HDAC6-234ENST00000493923 APOBEC3FQ8IUX4 373 aaKnown RBP10.15□□□□□ -0.78
HDAC6-234ENST00000493923 DEFB129Q9H1M3 183 aa10.15□□□□□ -0.78
HDAC6-234ENST00000493923 SMC4Q9NTJ3 1288 aa10.15□□□□□ -0.78
HDAC6-234ENST00000493923 HDAC9Q9UKV0 1011 aa10.15□□□□□ -0.78
HDAC6-234ENST00000493923 NOB1Q9ULX3 412 aaKnown RBP10.15□□□□□ -0.78
HDAC6-234ENST00000493923 TNRC18O15417 2968 aaPredicted RBP10.15□□□□□ -0.78
HDAC6-234ENST00000493923 COL1A1P02452 1464 aaPredicted RBP10.15□□□□□ -0.78
HDAC6-234ENST00000493923 CCDC85CA6NKD9 419 aa10.14□□□□□ -0.79
HDAC6-234ENST00000493923 TBC1D8O95759 1140 aa10.14□□□□□ -0.79
HDAC6-234ENST00000493923 FGFR2P21802 821 aa10.14□□□□□ -0.79
HDAC6-234ENST00000493923 GJA5P36382 358 aa10.14□□□□□ -0.79
HDAC6-234ENST00000493923 FKBP1AP62942 108 aaKnown RBP10.14□□□□□ -0.79
HDAC6-234ENST00000493923 EVX2Q03828 476 aa10.14□□□□□ -0.79
HDAC6-234ENST00000493923 CHAF1AQ13111 956 aaPredicted RBP10.14□□□□□ -0.79
HDAC6-234ENST00000493923 ALDH1L2Q3SY69 923 aa10.14□□□□□ -0.79
HDAC6-234ENST00000493923 METTL24Q5JXM2 366 aa10.14□□□□□ -0.79
HDAC6-234ENST00000493923 MFSD14BQ5SR56 506 aa10.14□□□□□ -0.79
HDAC6-234ENST00000493923 B4GALNT3Q6L9W6 998 aa10.14□□□□□ -0.79
HDAC6-234ENST00000493923 ATG9AQ7Z3C6 839 aa10.14□□□□□ -0.79
HDAC6-234ENST00000493923 TDRD3Q9H7E2 651 aaKnown RBP10.14□□□□□ -0.79
HDAC6-234ENST00000493923 VEZTQ9HBM0 779 aa10.14□□□□□ -0.79
HDAC6-234ENST00000493923 ZNF70Q9UC06 446 aaPredicted RBP10.14□□□□□ -0.79
HDAC6-234ENST00000493923 ANGEL1Q9UNK9 670 aaKnown RBP10.14□□□□□ -0.79
HDAC6-234ENST00000493923 MROH5Q6ZUA9 1318 aa10.13□□□□□ -0.79
HDAC6-234ENST00000493923 HTTP42858 3142 aa10.13□□□□□ -0.79
HDAC6-234ENST00000493923 C19orf67A6NJJ6 358 aa10.13□□□□□ -0.79
HDAC6-234ENST00000493923 CACNB3P54284 484 aa10.13□□□□□ -0.79
HDAC6-234ENST00000493923 TEPSINQ96N21 525 aa10.13□□□□□ -0.79
HDAC6-234ENST00000493923 SAGE1Q9NXZ1 904 aa10.13□□□□□ -0.79
HDAC6-234ENST00000493923 TTF2Q9UNY4 1162 aaKnown RBP10.13□□□□□ -0.79
HDAC6-234ENST00000493923 PA2G4Q9UQ80 394 aaKnown RBP10.13□□□□□ -0.79
HDAC6-234ENST00000493923 PDE4DIPQ5VU43 2346 aa10.13□□□□□ -0.79
HDAC6-234ENST00000493923 USP2O75604 605 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-234ENST00000493923 PDE8BO95263 885 aa10.12□□□□□ -0.79
HDAC6-234ENST00000493923 HSP90AA1P07900 732 aaKnown RBP10.12□□□□□ -0.79
HDAC6-234ENST00000493923 CRKP46108 304 aa10.12□□□□□ -0.79
HDAC6-234ENST00000493923 RBM5P52756 815 aaKnown RBP eCLIP10.12□□□□□ -0.79
HDAC6-234ENST00000493923 RARSP54136 660 aaKnown RBP10.12□□□□□ -0.79
HDAC6-234ENST00000493923 HSP90AA2PQ14568 343 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-234ENST00000493923 RASA3Q14644 834 aa10.12□□□□□ -0.79
HDAC6-234ENST00000493923 L1TD1Q5T7N2 865 aaKnown RBP10.12□□□□□ -0.79
HDAC6-234ENST00000493923 SPRYD7Q5W111 196 aa10.12□□□□□ -0.79
HDAC6-234ENST00000493923 DZIP1LQ8IYY4 767 aaKnown RBP10.12□□□□□ -0.79
HDAC6-234ENST00000493923 MEIS3Q99687 375 aa10.12□□□□□ -0.79
HDAC6-234ENST00000493923 SIL1Q9H173 461 aa10.12□□□□□ -0.79
HDAC6-234ENST00000493923 BRPF3Q9ULD4 1205 aa10.12□□□□□ -0.79
HDAC6-234ENST00000493923 LRRFIP2Q9Y608 721 aaKnown RBP10.12□□□□□ -0.79
HDAC6-234ENST00000493923 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-234ENST00000493923 MYH13Q9UKX3 1938 aa10.11□□□□□ -0.79
HDAC6-234ENST00000493923 TCP10L2B9ZVM9 353 aa10.11□□□□□ -0.79
HDAC6-234ENST00000493923 EYA2O00167 538 aa10.11□□□□□ -0.79
HDAC6-234ENST00000493923 TM4SF4P48230 202 aa10.11□□□□□ -0.79
HDAC6-234ENST00000493923 MMP14P50281 582 aa10.11□□□□□ -0.79
HDAC6-234ENST00000493923 IRX6P78412 446 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-234ENST00000493923 CAP1Q01518 475 aa10.11□□□□□ -0.79
HDAC6-234ENST00000493923 MAP3K11Q16584 847 aa10.11□□□□□ -0.79
HDAC6-234ENST00000493923 ARMC9Q7Z3E5 817 aa10.11□□□□□ -0.79
HDAC6-234ENST00000493923 ZNF296Q8WUU4 475 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-234ENST00000493923 WNK4Q96J92 1243 aa10.11□□□□□ -0.79
HDAC6-234ENST00000493923 TMEM39BQ9GZU3 492 aa10.11□□□□□ -0.79
HDAC6-234ENST00000493923 LAMB1P07942 1786 aa10.11□□□□□ -0.79
HDAC6-234ENST00000493923 IGF2BP3O00425 579 aaKnown RBP eCLIP10.1□□□□□ -0.79
HDAC6-234ENST00000493923 BCAR3O75815 825 aa10.1□□□□□ -0.79
HDAC6-234ENST00000493923 ADORA1P30542 326 aa10.1□□□□□ -0.79
HDAC6-234ENST00000493923 NF2P35240 595 aa10.1□□□□□ -0.79
HDAC6-234ENST00000493923 SERPINA10Q9UK55 444 aa10.1□□□□□ -0.79
HDAC6-234ENST00000493923 UBTFL1P0CB47 393 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-234ENST00000493923 PUM3Q15397 648 aaKnown RBP10.09□□□□□ -0.79
HDAC6-234ENST00000493923 APOBEC3HQ6NTF7 200 aaKnown RBP10.09□□□□□ -0.79
HDAC6-234ENST00000493923 SLC10A4Q96EP9 437 aa10.09□□□□□ -0.79
HDAC6-234ENST00000493923 PTPN18Q99952 460 aa10.09□□□□□ -0.79
HDAC6-234ENST00000493923 GPR25O00155 361 aa10.08□□□□□ -0.8
HDAC6-234ENST00000493923 PHKA1P46020 1223 aa10.08□□□□□ -0.8
HDAC6-234ENST00000493923 RGS19P49795 217 aa10.08□□□□□ -0.8
HDAC6-234ENST00000493923 SOX10P56693 466 aa10.08□□□□□ -0.8
HDAC6-234ENST00000493923 DIXDC1Q155Q3 683 aa10.08□□□□□ -0.8
HDAC6-234ENST00000493923 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms