RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 MAP3K9P80192 1104 aa13.91□□□□□ -0.18
SNRNP200-207ENST00000493271 TAF1CQ15572 869 aaPredicted RBP13.91□□□□□ -0.18
SNRNP200-207ENST00000493271 SLC9C1Q4G0N8 1177 aa13.91□□□□□ -0.18
SNRNP200-207ENST00000493271 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.91□□□□□ -0.18
SNRNP200-207ENST00000493271 TEPSINQ96N21 525 aa13.91□□□□□ -0.18
SNRNP200-207ENST00000493271 TDRD3Q9H7E2 651 aaKnown RBP13.91□□□□□ -0.18
SNRNP200-207ENST00000493271 C9orf78Q9NZ63 289 aaPredicted RBP13.91□□□□□ -0.18
SNRNP200-207ENST00000493271 CENPFP49454 3210 aa13.91□□□□□ -0.18
SNRNP200-207ENST00000493271 MROH5Q6ZUA9 1318 aa13.9□□□□□ -0.18
SNRNP200-207ENST00000493271 CCL15-CCL14A0A0B4J2E2 113 aa13.9□□□□□ -0.18
SNRNP200-207ENST00000493271 PLIN1O60240 522 aa13.9□□□□□ -0.18
SNRNP200-207ENST00000493271 CRKP46108 304 aa13.9□□□□□ -0.18
SNRNP200-207ENST00000493271 PRMT2P55345 433 aa13.9□□□□□ -0.18
SNRNP200-207ENST00000493271 VGLL4Q14135 290 aa13.9□□□□□ -0.18
SNRNP200-207ENST00000493271 KIF22Q14807 665 aa13.9□□□□□ -0.18
SNRNP200-207ENST00000493271 CCL15Q16663 113 aa13.9□□□□□ -0.18
SNRNP200-207ENST00000493271 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.9□□□□□ -0.18
SNRNP200-207ENST00000493271 MRIQ9BWK5 157 aa13.9□□□□□ -0.18
SNRNP200-207ENST00000493271 JAG2Q9Y219 1238 aa13.9□□□□□ -0.18
SNRNP200-207ENST00000493271 OTOFQ9HC10 1997 aa13.9□□□□□ -0.18
SNRNP200-207ENST00000493271 SPDYE5A6NIY4 337 aa13.89□□□□□ -0.19
SNRNP200-207ENST00000493271 EN2P19622 333 aaPredicted RBP13.89□□□□□ -0.19
SNRNP200-207ENST00000493271 CAVIN4Q5BKX8 364 aa13.89□□□□□ -0.19
SNRNP200-207ENST00000493271 FKBP1CQ5VVH2 108 aa13.89□□□□□ -0.19
SNRNP200-207ENST00000493271 VPS37DQ86XT2 251 aa13.89□□□□□ -0.19
SNRNP200-207ENST00000493271 BRI3BPQ8WY22 251 aa13.89□□□□□ -0.19
SNRNP200-207ENST00000493271 ZNF594Q96JF6 807 aaPredicted RBP13.89□□□□□ -0.19
SNRNP200-207ENST00000493271 FAM84BQ96KN1 310 aaPredicted RBP13.89□□□□□ -0.19
SNRNP200-207ENST00000493271 TMOD2Q9NZR1 351 aa13.89□□□□□ -0.19
SNRNP200-207ENST00000493271 SUGT1Q9Y2Z0 365 aa13.89□□□□□ -0.19
SNRNP200-207ENST00000493271 MAST3O60307 1309 aa13.89□□□□□ -0.19
SNRNP200-207ENST00000493271 AOX1Q06278 1338 aa13.89□□□□□ -0.19
SNRNP200-207ENST00000493271 F6X3S4 739 aa13.88□□□□□ -0.19
SNRNP200-207ENST00000493271 TLR2O60603 784 aa13.88□□□□□ -0.19
SNRNP200-207ENST00000493271 CETPP11597 493 aa13.88□□□□□ -0.19
SNRNP200-207ENST00000493271 GYG1P46976 350 aa13.88□□□□□ -0.19
SNRNP200-207ENST00000493271 EXOSC9Q06265 439 aaKnown RBP13.88□□□□□ -0.19
SNRNP200-207ENST00000493271 EPHA10Q5JZY3 1008 aa13.88□□□□□ -0.19
SNRNP200-207ENST00000493271 FAM83AQ86UY5 434 aa13.88□□□□□ -0.19
SNRNP200-207ENST00000493271 ERO1BQ86YB8 467 aa13.88□□□□□ -0.19
SNRNP200-207ENST00000493271 TEKT1Q969V4 418 aa13.88□□□□□ -0.19
SNRNP200-207ENST00000493271 SRCIN1Q9C0H9 1055 aa13.88□□□□□ -0.19
SNRNP200-207ENST00000493271 RPAP1Q9BWH6 1393 aaPredicted RBP13.87□□□□□ -0.19
SNRNP200-207ENST00000493271 BRCA2P51587 3418 aa13.87□□□□□ -0.19
SNRNP200-207ENST00000493271 TCP10L2B9ZVM9 353 aa13.87□□□□□ -0.19
SNRNP200-207ENST00000493271 SNAPC2Q13487 334 aa13.87□□□□□ -0.19
SNRNP200-207ENST00000493271 SLC4A8Q2Y0W8 1093 aa13.87□□□□□ -0.19
SNRNP200-207ENST00000493271 DCAF15Q66K64 600 aa13.87□□□□□ -0.19
SNRNP200-207ENST00000493271 FBXO33Q7Z6M2 555 aa13.87□□□□□ -0.19
SNRNP200-207ENST00000493271 FAM43AQ8N2R8 423 aa13.87□□□□□ -0.19
SNRNP200-207ENST00000493271 OTUD5Q96G74 571 aa13.87□□□□□ -0.19
SNRNP200-207ENST00000493271 TMEM39BQ9GZU3 492 aa13.87□□□□□ -0.19
SNRNP200-207ENST00000493271 PTCH2Q9Y6C5 1203 aa13.87□□□□□ -0.19
SNRNP200-207ENST00000493271 KIAA0100Q14667 2235 aaKnown RBP13.87□□□□□ -0.19
SNRNP200-207ENST00000493271 KIF16BQ96L93 1317 aa13.87□□□□□ -0.19
SNRNP200-207ENST00000493271 FRAT2O75474 233 aaPredicted RBP13.86□□□□□ -0.19
SNRNP200-207ENST00000493271 ZDHHC15Q96MV8 337 aa13.86□□□□□ -0.19
SNRNP200-207ENST00000493271 RIPOR2Q9Y4F9 1068 aa13.86□□□□□ -0.19
SNRNP200-207ENST00000493271 UTYO14607 1347 aa13.86□□□□□ -0.19
SNRNP200-207ENST00000493271 LACTBP83111 547 aaPredicted RBP13.85□□□□□ -0.19
SNRNP200-207ENST00000493271 PPIL2Q13356 520 aa13.85□□□□□ -0.19
SNRNP200-207ENST00000493271 RABL6Q3YEC7 729 aaPredicted RBP13.85□□□□□ -0.19
SNRNP200-207ENST00000493271 WRNIP1Q96S55 665 aa13.85□□□□□ -0.19
SNRNP200-207ENST00000493271 SNCAIPQ9Y6H5 919 aa13.85□□□□□ -0.19
SNRNP200-207ENST00000493271 PDE8BO95263 885 aa13.84□□□□□ -0.19
SNRNP200-207ENST00000493271 HOXD10P28358 340 aa13.84□□□□□ -0.19
SNRNP200-207ENST00000493271 FXR1P51114 621 aaKnown RBP eCLIP13.84□□□□□ -0.199e-6■■■□□ 16.8
SNRNP200-207ENST00000493271 CAP1Q01518 475 aa13.84□□□□□ -0.19
SNRNP200-207ENST00000493271 PPATQ06203 517 aa13.84□□□□□ -0.19
SNRNP200-207ENST00000493271 SLC4A10Q6U841 1118 aa13.84□□□□□ -0.19
SNRNP200-207ENST00000493271 HHIPL2Q6UWX4 724 aa13.84□□□□□ -0.19
SNRNP200-207ENST00000493271 CDAN1Q8IWY9 1227 aa13.84□□□□□ -0.19
SNRNP200-207ENST00000493271 NKX2-3Q8TAU0 364 aa13.84□□□□□ -0.19
SNRNP200-207ENST00000493271 CNKSR2Q8WXI2 1034 aa13.84□□□□□ -0.19
SNRNP200-207ENST00000493271 IRF6O14896 467 aa13.83□□□□□ -0.2
SNRNP200-207ENST00000493271 CCDC184Q52MB2 194 aa13.83□□□□□ -0.2
SNRNP200-207ENST00000493271 METTL24Q5JXM2 366 aa13.83□□□□□ -0.2
SNRNP200-207ENST00000493271 SUCLG2Q96I99 432 aa13.83□□□□□ -0.2
SNRNP200-207ENST00000493271 ZNF341Q9BYN7 854 aa13.83□□□□□ -0.2
SNRNP200-207ENST00000493271 PUS3Q9BZE2 481 aaKnown RBP13.83□□□□□ -0.2
SNRNP200-207ENST00000493271 MRS2Q9HD23 443 aa13.83□□□□□ -0.2
SNRNP200-207ENST00000493271 BTBD19C9JJ37 291 aa13.82□□□□□ -0.2
SNRNP200-207ENST00000493271 IFIT1P09914 478 aaKnown RBP13.82□□□□□ -0.2
SNRNP200-207ENST00000493271 CAPN2P17655 700 aa13.82□□□□□ -0.2
SNRNP200-207ENST00000493271 CHAF1AQ13111 956 aaPredicted RBP13.82□□□□□ -0.2
SNRNP200-207ENST00000493271 ANKRD23Q86SG2 305 aa13.82□□□□□ -0.2
SNRNP200-207ENST00000493271 KAZALD1Q96I82 304 aa13.82□□□□□ -0.2
SNRNP200-207ENST00000493271 NBPF7P0C2Y1 421 aaPredicted RBP13.81□□□□□ -0.2
SNRNP200-207ENST00000493271 PUM3Q15397 648 aaKnown RBP13.81□□□□□ -0.2
SNRNP200-207ENST00000493271 APOBEC3HQ6NTF7 200 aaKnown RBP13.81□□□□□ -0.2
SNRNP200-207ENST00000493271 C17orf99Q6UX52 265 aa13.81□□□□□ -0.2
SNRNP200-207ENST00000493271 VGLL2Q8N8G2 317 aa13.81□□□□□ -0.2
SNRNP200-207ENST00000493271 WDR66Q8TBY9 1149 aa13.81□□□□□ -0.2
SNRNP200-207ENST00000493271 BICC1Q9H694 974 aaKnown RBP13.81□□□□□ -0.2
SNRNP200-207ENST00000493271 COLQQ9Y215 455 aaPredicted RBP13.81□□□□□ -0.2
SNRNP200-207ENST00000493271 GRIK5Q16478 980 aa13.8□□□□□ -0.2
SNRNP200-207ENST00000493271 SH3TC2Q8TF17 1288 aa13.8□□□□□ -0.2
SNRNP200-207ENST00000493271 FAM151AQ8WW52 585 aa13.8□□□□□ -0.2
SNRNP200-207ENST00000493271 ZKSCAN4Q969J2 545 aaPredicted RBP13.8□□□□□ -0.2
SNRNP200-207ENST00000493271 SRRDQ9UH36 339 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms