RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 EN2P19622 333 aaPredicted RBP13.94□□□□□ -0.18
SND1-215ENST00000492772 HIBADHP31937 336 aaKnown RBP13.94□□□□□ -0.18
SND1-215ENST00000492772 VGLL4Q14135 290 aa13.94□□□□□ -0.18
SND1-215ENST00000492772 CCL15Q16663 113 aa13.94□□□□□ -0.18
SND1-215ENST00000492772 SLC9C1Q4G0N8 1177 aa13.94□□□□□ -0.18
SND1-215ENST00000492772 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.94□□□□□ -0.18
SND1-215ENST00000492772 NBPF11Q86T75 865 aa13.94□□□□□ -0.18
SND1-215ENST00000492772 DZIP1LQ8IYY4 767 aaKnown RBP13.94□□□□□ -0.18
SND1-215ENST00000492772 BRI3BPQ8WY22 251 aa13.94□□□□□ -0.18
SND1-215ENST00000492772 TDRD3Q9H7E2 651 aaKnown RBP13.94□□□□□ -0.18
SND1-215ENST00000492772 F6X3S4 739 aa13.93□□□□□ -0.18
SND1-215ENST00000492772 CRKP46108 304 aa13.93□□□□□ -0.18
SND1-215ENST00000492772 MAP3K9P80192 1104 aa13.93□□□□□ -0.18
SND1-215ENST00000492772 EPHA10Q5JZY3 1008 aa13.93□□□□□ -0.18
SND1-215ENST00000492772 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.93□□□□□ -0.183e-6■■■■□ 21.3
SND1-215ENST00000492772 TMEM39BQ9GZU3 492 aa13.93□□□□□ -0.18
SND1-215ENST00000492772 ZCCHC17Q9NP64 241 aaKnown RBP13.93□□□□□ -0.18
SND1-215ENST00000492772 TCP10L2B9ZVM9 353 aa13.92□□□□□ -0.18
SND1-215ENST00000492772 GYG1P46976 350 aa13.92□□□□□ -0.18
SND1-215ENST00000492772 CAP1Q01518 475 aa13.92□□□□□ -0.18
SND1-215ENST00000492772 EXOSC9Q06265 439 aaKnown RBP13.92□□□□□ -0.18
SND1-215ENST00000492772 WDR63Q8IWG1 891 aa13.92□□□□□ -0.18
SND1-215ENST00000492772 CDAN1Q8IWY9 1227 aa13.92□□□□□ -0.18
SND1-215ENST00000492772 OTUD5Q96G74 571 aa13.92□□□□□ -0.18
SND1-215ENST00000492772 FAM84BQ96KN1 310 aaPredicted RBP13.92□□□□□ -0.18
SND1-215ENST00000492772 C9orf78Q9NZ63 289 aaPredicted RBP13.92□□□□□ -0.18
SND1-215ENST00000492772 PTCH2Q9Y6C5 1203 aa13.92□□□□□ -0.18
SND1-215ENST00000492772 MROH5Q6ZUA9 1318 aa13.91□□□□□ -0.18
SND1-215ENST00000492772 SPDYE5A6NIY4 337 aa13.91□□□□□ -0.18
SND1-215ENST00000492772 ALDH1L1O75891 902 aa13.91□□□□□ -0.18
SND1-215ENST00000492772 HDLBPQ00341 1268 aaKnown RBP13.91□□□□□ -0.18
SND1-215ENST00000492772 KIF22Q14807 665 aa13.91□□□□□ -0.18
SND1-215ENST00000492772 VPS37DQ86XT2 251 aa13.91□□□□□ -0.18
SND1-215ENST00000492772 FAM43AQ8N2R8 423 aa13.91□□□□□ -0.18
SND1-215ENST00000492772 TBC1D22AQ8WUA7 517 aa13.91□□□□□ -0.18
SND1-215ENST00000492772 CNKSR2Q8WXI2 1034 aa13.91□□□□□ -0.18
SND1-215ENST00000492772 HOOK2Q96ED9 719 aa13.91□□□□□ -0.18
SND1-215ENST00000492772 ZSWIM8A7E2V4 1837 aa13.91□□□□□ -0.18
SND1-215ENST00000492772 RPAP1Q9BWH6 1393 aaPredicted RBP13.91□□□□□ -0.18
SND1-215ENST00000492772 GNRH1P01148 92 aa13.9□□□□□ -0.18
SND1-215ENST00000492772 CETPP11597 493 aa13.9□□□□□ -0.18
SND1-215ENST00000492772 SLC4A8Q2Y0W8 1093 aa13.9□□□□□ -0.18
SND1-215ENST00000492772 CCDC184Q52MB2 194 aa13.9□□□□□ -0.18
SND1-215ENST00000492772 TEKT1Q969V4 418 aa13.9□□□□□ -0.18
SND1-215ENST00000492772 SRCIN1Q9C0H9 1055 aa13.9□□□□□ -0.18
SND1-215ENST00000492772 TMOD2Q9NZR1 351 aa13.9□□□□□ -0.18
SND1-215ENST00000492772 MYH13Q9UKX3 1938 aa13.9□□□□□ -0.18
SND1-215ENST00000492772 MAST3O60307 1309 aa13.9□□□□□ -0.19
SND1-215ENST00000492772 TLR2O60603 784 aa13.89□□□□□ -0.19
SND1-215ENST00000492772 FXR1P51114 621 aaKnown RBP eCLIP13.89□□□□□ -0.19
SND1-215ENST00000492772 PRMT2P55345 433 aa13.89□□□□□ -0.19
SND1-215ENST00000492772 SNAPC2Q13487 334 aa13.89□□□□□ -0.19
SND1-215ENST00000492772 ERO1BQ86YB8 467 aa13.89□□□□□ -0.19
SND1-215ENST00000492772 SNCAIPQ9Y6H5 919 aa13.89□□□□□ -0.19
SND1-215ENST00000492772 LACTBP83111 547 aaPredicted RBP13.88□□□□□ -0.19
SND1-215ENST00000492772 CHAF1AQ13111 956 aaPredicted RBP13.88□□□□□ -0.19
SND1-215ENST00000492772 PPIL2Q13356 520 aa13.88□□□□□ -0.19
SND1-215ENST00000492772 CAVIN4Q5BKX8 364 aa13.88□□□□□ -0.19
SND1-215ENST00000492772 FKBP1CQ5VVH2 108 aa13.88□□□□□ -0.19
SND1-215ENST00000492772 DCAF15Q66K64 600 aa13.88□□□□□ -0.19
SND1-215ENST00000492772 SLC4A10Q6U841 1118 aa13.88□□□□□ -0.19
SND1-215ENST00000492772 FBXO33Q7Z6M2 555 aa13.88□□□□□ -0.19
SND1-215ENST00000492772 FAM83AQ86UY5 434 aa13.88□□□□□ -0.19
SND1-215ENST00000492772 WRNIP1Q96S55 665 aa13.88□□□□□ -0.19
SND1-215ENST00000492772 PUS3Q9BZE2 481 aaKnown RBP13.88□□□□□ -0.19
SND1-215ENST00000492772 RIPOR2Q9Y4F9 1068 aa13.88□□□□□ -0.19
SND1-215ENST00000492772 BTBD19C9JJ37 291 aa13.87□□□□□ -0.19
SND1-215ENST00000492772 FRAT2O75474 233 aaPredicted RBP13.87□□□□□ -0.19
SND1-215ENST00000492772 SUCLG2Q96I99 432 aa13.87□□□□□ -0.19
SND1-215ENST00000492772 ZDHHC15Q96MV8 337 aa13.87□□□□□ -0.19
SND1-215ENST00000492772 IQSEC3Q9UPP2 1182 aaPredicted RBP13.87□□□□□ -0.19
SND1-215ENST00000492772 SUGT1Q9Y2Z0 365 aa13.87□□□□□ -0.19
SND1-215ENST00000492772 UTYO14607 1347 aa13.87□□□□□ -0.19
SND1-215ENST00000492772 KIF16BQ96L93 1317 aa13.87□□□□□ -0.19
SND1-215ENST00000492772 IRF6O14896 467 aa13.86□□□□□ -0.19
SND1-215ENST00000492772 CACNB3P54284 484 aa13.86□□□□□ -0.19
SND1-215ENST00000492772 GRIK5Q16478 980 aa13.86□□□□□ -0.19
SND1-215ENST00000492772 METTL24Q5JXM2 366 aa13.86□□□□□ -0.19
SND1-215ENST00000492772 SH3TC2Q8TF17 1288 aa13.86□□□□□ -0.19
SND1-215ENST00000492772 KAZALD1Q96I82 304 aa13.86□□□□□ -0.19
SND1-215ENST00000492772 MRIQ9BWK5 157 aa13.86□□□□□ -0.19
SND1-215ENST00000492772 ARHGAP39Q9C0H5 1083 aa13.86□□□□□ -0.19
SND1-215ENST00000492772 MRS2Q9HD23 443 aa13.86□□□□□ -0.19
SND1-215ENST00000492772 COLQQ9Y215 455 aaPredicted RBP13.86□□□□□ -0.19
SND1-215ENST00000492772 PPATQ06203 517 aa13.85□□□□□ -0.19
SND1-215ENST00000492772 RABL6Q3YEC7 729 aaPredicted RBP13.85□□□□□ -0.19
SND1-215ENST00000492772 ZKSCAN4Q969J2 545 aaPredicted RBP13.85□□□□□ -0.19
SND1-215ENST00000492772 ZNF341Q9BYN7 854 aa13.85□□□□□ -0.19
SND1-215ENST00000492772 CEP290O15078 2479 aa13.85□□□□□ -0.19
SND1-215ENST00000492772 PDE8BO95263 885 aa13.84□□□□□ -0.19
SND1-215ENST00000492772 MYCP01106 439 aaPredicted RBP13.84□□□□□ -0.19
SND1-215ENST00000492772 NBPF7P0C2Y1 421 aaPredicted RBP13.84□□□□□ -0.19
SND1-215ENST00000492772 APOBEC3HQ6NTF7 200 aaKnown RBP13.84□□□□□ -0.19
SND1-215ENST00000492772 HHIPL2Q6UWX4 724 aa13.84□□□□□ -0.19
SND1-215ENST00000492772 ANKRD23Q86SG2 305 aa13.84□□□□□ -0.19
SND1-215ENST00000492772 VGLL2Q8N8G2 317 aa13.84□□□□□ -0.19
SND1-215ENST00000492772 BICC1Q9H694 974 aaKnown RBP13.84□□□□□ -0.19
SND1-215ENST00000492772 SALL2Q9Y467 1007 aaPredicted RBP13.84□□□□□ -0.19
SND1-215ENST00000492772 H0YGN5 161 aa13.83□□□□□ -0.2
SND1-215ENST00000492772 HOXD10P28358 340 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms