RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 RBBP6Q7Z6E9 1792 aaKnown RBP13.78□□□□□ -0.2
TMEM39A-211ENST00000491685 GJA5P36382 358 aa13.78□□□□□ -0.2
TMEM39A-211ENST00000491685 CHAF1AQ13111 956 aaPredicted RBP13.78□□□□□ -0.2
TMEM39A-211ENST00000491685 RASA3Q14644 834 aa13.78□□□□□ -0.2
TMEM39A-211ENST00000491685 PKN2Q16513 984 aaKnown RBP13.78□□□□□ -0.2
TMEM39A-211ENST00000491685 SPDYE2Q495Y8 402 aa13.78□□□□□ -0.2
TMEM39A-211ENST00000491685 ZNF296Q8WUU4 475 aaPredicted RBP13.78□□□□□ -0.2
TMEM39A-211ENST00000491685 FRAT1Q92837 279 aaPredicted RBP13.78□□□□□ -0.2
TMEM39A-211ENST00000491685 WNK4Q96J92 1243 aa13.78□□□□□ -0.2
TMEM39A-211ENST00000491685 ZNF70Q9UC06 446 aaPredicted RBP13.78□□□□□ -0.2
TMEM39A-211ENST00000491685 RCAN3Q9UKA8 241 aa13.78□□□□□ -0.2
TMEM39A-211ENST00000491685 PPP2R3BQ9Y5P8 575 aa13.78□□□□□ -0.2
TMEM39A-211ENST00000491685 KIF16BQ96L93 1317 aa13.78□□□□□ -0.2
TMEM39A-211ENST00000491685 MYO1BO43795 1136 aa13.77□□□□□ -0.21
TMEM39A-211ENST00000491685 PDE8BO95263 885 aa13.77□□□□□ -0.21
TMEM39A-211ENST00000491685 CRKP46108 304 aa13.77□□□□□ -0.21
TMEM39A-211ENST00000491685 BCAMP50895 628 aa13.77□□□□□ -0.21
TMEM39A-211ENST00000491685 HDAC5Q9UQL6 1122 aa13.77□□□□□ -0.21
TMEM39A-211ENST00000491685 GPR25O00155 361 aa13.76□□□□□ -0.21
TMEM39A-211ENST00000491685 USP2O75604 605 aaPredicted RBP13.76□□□□□ -0.21
TMEM39A-211ENST00000491685 FGFR2P21802 821 aa13.76□□□□□ -0.21
TMEM39A-211ENST00000491685 SREBF2Q12772 1141 aa13.76□□□□□ -0.21
TMEM39A-211ENST00000491685 DZIP1LQ8IYY4 767 aaKnown RBP13.76□□□□□ -0.21
TMEM39A-211ENST00000491685 GCC1Q96CN9 775 aa13.76□□□□□ -0.21
TMEM39A-211ENST00000491685 TEPSINQ96N21 525 aa13.76□□□□□ -0.21
TMEM39A-211ENST00000491685 SERPINA10Q9UK55 444 aa13.76□□□□□ -0.21
TMEM39A-211ENST00000491685 ZSWIM8A7E2V4 1837 aa13.76□□□□□ -0.21
TMEM39A-211ENST00000491685 TCP10L2B9ZVM9 353 aa13.75□□□□□ -0.21
TMEM39A-211ENST00000491685 IGF2BP3O00425 579 aaKnown RBP eCLIP13.75□□□□□ -0.21
TMEM39A-211ENST00000491685 BCAR3O75815 825 aa13.75□□□□□ -0.21
TMEM39A-211ENST00000491685 CACNB3P54284 484 aa13.75□□□□□ -0.21
TMEM39A-211ENST00000491685 ZKSCAN2Q63HK3 967 aa13.75□□□□□ -0.21
TMEM39A-211ENST00000491685 TMEM39BQ9GZU3 492 aa13.75□□□□□ -0.21
TMEM39A-211ENST00000491685 EYA2O00167 538 aa13.74□□□□□ -0.21
TMEM39A-211ENST00000491685 PPP1R12BO60237 982 aaPredicted RBP13.74□□□□□ -0.21
TMEM39A-211ENST00000491685 PUM3Q15397 648 aaKnown RBP13.74□□□□□ -0.21
TMEM39A-211ENST00000491685 SUPT20HL1Q3ZLR7 823 aa13.74□□□□□ -0.21
TMEM39A-211ENST00000491685 ATG9AQ7Z3C6 839 aa13.74□□□□□ -0.21
TMEM39A-211ENST00000491685 VPS37DQ86XT2 251 aa13.74□□□□□ -0.21
TMEM39A-211ENST00000491685 CNKSR2Q8WXI2 1034 aa13.74□□□□□ -0.21
TMEM39A-211ENST00000491685 SLC10A4Q96EP9 437 aa13.74□□□□□ -0.21
TMEM39A-211ENST00000491685 CFHR5Q9BXR6 569 aa13.74□□□□□ -0.21
TMEM39A-211ENST00000491685 ZBTB48P10074 688 aaPredicted RBP13.73□□□□□ -0.21
TMEM39A-211ENST00000491685 CAVIN4Q5BKX8 364 aa13.73□□□□□ -0.21
TMEM39A-211ENST00000491685 ATF7IPQ6VMQ6 1270 aa13.73□□□□□ -0.21
TMEM39A-211ENST00000491685 IFNL1Q8IU54 200 aa13.73□□□□□ -0.21
TMEM39A-211ENST00000491685 SIL1Q9H173 461 aa13.73□□□□□ -0.21
TMEM39A-211ENST00000491685 ELP3Q9H9T3 547 aa13.73□□□□□ -0.21
TMEM39A-211ENST00000491685 DOCK2Q92608 1830 aa13.73□□□□□ -0.21
TMEM39A-211ENST00000491685 MYH2Q9UKX2 1941 aa13.72□□□□□ -0.21
TMEM39A-211ENST00000491685 HTTP42858 3142 aa13.72□□□□□ -0.21
TMEM39A-211ENST00000491685 MANSC4A6NHS7 340 aaPredicted RBP13.72□□□□□ -0.21
TMEM39A-211ENST00000491685 FRAT2O75474 233 aaPredicted RBP13.72□□□□□ -0.21
TMEM39A-211ENST00000491685 IREB2P48200 963 aaKnown RBP13.72□□□□□ -0.21
TMEM39A-211ENST00000491685 TNFAIP1Q13829 316 aa13.72□□□□□ -0.21
TMEM39A-211ENST00000491685 NOM1Q5C9Z4 860 aaKnown RBP13.72□□□□□ -0.21
TMEM39A-211ENST00000491685 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.72□□□□□ -0.21
TMEM39A-211ENST00000491685 FTSJ3Q8IY81 847 aaKnown RBP13.72□□□□□ -0.21
TMEM39A-211ENST00000491685 ANKRD13AQ8IZ07 590 aa13.72□□□□□ -0.21
TMEM39A-211ENST00000491685 PTPN18Q99952 460 aa13.72□□□□□ -0.21
TMEM39A-211ENST00000491685 CHMP4BQ9H444 224 aaKnown RBP13.72□□□□□ -0.21
TMEM39A-211ENST00000491685 LRRFIP2Q9Y608 721 aaKnown RBP13.72□□□□□ -0.21
TMEM39A-211ENST00000491685 AK9Q5TCS8 1911 aa13.71□□□□□ -0.21
TMEM39A-211ENST00000491685 FKTNO75072 461 aa13.71□□□□□ -0.21
TMEM39A-211ENST00000491685 IFIT1P09914 478 aaKnown RBP13.71□□□□□ -0.21
TMEM39A-211ENST00000491685 UBTFL1P0CB47 393 aaPredicted RBP13.71□□□□□ -0.21
TMEM39A-211ENST00000491685 CAP1Q01518 475 aa13.71□□□□□ -0.21
TMEM39A-211ENST00000491685 VGLL4Q14135 290 aa13.71□□□□□ -0.21
TMEM39A-211ENST00000491685 FBXO46Q6PJ61 603 aaPredicted RBP13.71□□□□□ -0.21
TMEM39A-211ENST00000491685 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.71□□□□□ -0.21
TMEM39A-211ENST00000491685 TBC1D22AQ8WUA7 517 aa13.71□□□□□ -0.21
TMEM39A-211ENST00000491685 TEKT1Q969V4 418 aa13.71□□□□□ -0.21
TMEM39A-211ENST00000491685 OPTNQ96CV9 577 aa13.71□□□□□ -0.21
TMEM39A-211ENST00000491685 MEIS3Q99687 375 aa13.71□□□□□ -0.21
TMEM39A-211ENST00000491685 PA2G4Q9UQ80 394 aaKnown RBP13.71□□□□□ -0.21
TMEM39A-211ENST00000491685 TNNQ9UQP3 1299 aa13.71□□□□□ -0.21
TMEM39A-211ENST00000491685 MKI67P46013 3256 aaKnown RBP13.71□□□□□ -0.22
TMEM39A-211ENST00000491685 SLC5A1P13866 664 aa13.7□□□□□ -0.22
TMEM39A-211ENST00000491685 HDLBPQ00341 1268 aaKnown RBP13.7□□□□□ -0.22
TMEM39A-211ENST00000491685 APOBEC3HQ6NTF7 200 aaKnown RBP13.7□□□□□ -0.22
TMEM39A-211ENST00000491685 LPIN2Q92539 896 aa13.7□□□□□ -0.22
TMEM39A-211ENST00000491685 ZDHHC15Q96MV8 337 aa13.7□□□□□ -0.22
TMEM39A-211ENST00000491685 UNCXA6NJT0 531 aa13.69□□□□□ -0.22
TMEM39A-211ENST00000491685 CRHR2Q13324 411 aa13.69□□□□□ -0.22
TMEM39A-211ENST00000491685 MS4A4AQ96JQ5 239 aa13.69□□□□□ -0.22
TMEM39A-211ENST00000491685 TESPA1A2RU30 521 aaPredicted RBP13.68□□□□□ -0.22
TMEM39A-211ENST00000491685 CIAO1O76071 339 aa13.68□□□□□ -0.22
TMEM39A-211ENST00000491685 ALDH1A1P00352 501 aa13.68□□□□□ -0.22
TMEM39A-211ENST00000491685 PRDX5P30044 214 aa13.68□□□□□ -0.22
TMEM39A-211ENST00000491685 ADORA1P30542 326 aa13.68□□□□□ -0.22
TMEM39A-211ENST00000491685 PHKA1P46020 1223 aa13.68□□□□□ -0.22
TMEM39A-211ENST00000491685 TNNI2P48788 182 aa13.68□□□□□ -0.22
TMEM39A-211ENST00000491685 DIXDC1Q155Q3 683 aa13.68□□□□□ -0.22
TMEM39A-211ENST00000491685 ATP2B3Q16720 1220 aa13.68□□□□□ -0.22
TMEM39A-211ENST00000491685 HABP4Q5JVS0 413 aaKnown RBP13.68□□□□□ -0.22
TMEM39A-211ENST00000491685 CLUAP1Q96AJ1 413 aa13.68□□□□□ -0.22
TMEM39A-211ENST00000491685 DAGLAQ9Y4D2 1042 aa13.68□□□□□ -0.22
TMEM39A-211ENST00000491685 SNCAIPQ9Y6H5 919 aa13.68□□□□□ -0.22
TMEM39A-211ENST00000491685 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.68□□□□□ -0.22
TMEM39A-211ENST00000491685 RPAP1Q9BWH6 1393 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms