RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 POTECB2RU33 542 aa15.16■□□□□ 0.02
HDAC1-210ENST00000490081 SLF2Q8IX21 1173 aa15.16■□□□□ 0.02
HDAC1-210ENST00000490081 SNRKQ9NRH2 765 aa15.16■□□□□ 0.02
HDAC1-210ENST00000490081 CNOT7Q9UIV1 285 aaKnown RBP15.16■□□□□ 0.02
HDAC1-210ENST00000490081 HDAC9Q9UKV0 1011 aa15.16■□□□□ 0.02
HDAC1-210ENST00000490081 ZBTB12Q9Y330 459 aaPredicted RBP15.16■□□□□ 0.02
HDAC1-210ENST00000490081 GTF3C3Q9Y5Q9 886 aa15.16■□□□□ 0.02
HDAC1-210ENST00000490081 H7C1D1 291 aa15.15■□□□□ 0.02
HDAC1-210ENST00000490081 VEGFAP15692 232 aaPredicted RBP15.15■□□□□ 0.02
HDAC1-210ENST00000490081 MAP3K12Q12852 859 aa15.15■□□□□ 0.02
HDAC1-210ENST00000490081 KBTBD3Q8NAB2 608 aa15.15■□□□□ 0.02
HDAC1-210ENST00000490081 NSUN4Q96CB9 384 aaKnown RBP15.15■□□□□ 0.02
HDAC1-210ENST00000490081 EVI5LQ96CN4 794 aa15.15■□□□□ 0.02
HDAC1-210ENST00000490081 ZBED3Q96IU2 234 aaPredicted RBP15.15■□□□□ 0.02
HDAC1-210ENST00000490081 LRP2BPQ9P2M1 347 aa15.15■□□□□ 0.02
HDAC1-210ENST00000490081 MYH7P12883 1935 aa15.15■□□□□ 0.02
HDAC1-210ENST00000490081 MYH2Q9UKX2 1941 aa15.14■□□□□ 0.01
HDAC1-210ENST00000490081 GOLIM4O00461 696 aa15.14■□□□□ 0.01
HDAC1-210ENST00000490081 MAP4K4O95819 1239 aaPredicted RBP15.14■□□□□ 0.01
HDAC1-210ENST00000490081 LDHCP07864 332 aa15.14■□□□□ 0.01
HDAC1-210ENST00000490081 ZFYP08048 801 aaPredicted RBP15.14■□□□□ 0.01
HDAC1-210ENST00000490081 LMOD1P29536 600 aaPredicted RBP15.14■□□□□ 0.01
HDAC1-210ENST00000490081 PRDX5P30044 214 aa15.14■□□□□ 0.01
HDAC1-210ENST00000490081 GSTO1P78417 241 aa15.14■□□□□ 0.01
HDAC1-210ENST00000490081 GRIK5Q16478 980 aa15.14■□□□□ 0.01
HDAC1-210ENST00000490081 LRRFIP1Q32MZ4 808 aaKnown RBP15.14■□□□□ 0.01
HDAC1-210ENST00000490081 TTC22Q5TAA0 569 aa15.14■□□□□ 0.01
HDAC1-210ENST00000490081 ZSCAN25Q6NSZ9 544 aa15.14■□□□□ 0.01
HDAC1-210ENST00000490081 TBC1D9Q6ZT07 1266 aa15.14■□□□□ 0.01
HDAC1-210ENST00000490081 FBXW7Q969H0 707 aa15.14■□□□□ 0.01
HDAC1-210ENST00000490081 MXD3Q9BW11 206 aa15.14■□□□□ 0.01
HDAC1-210ENST00000490081 ANTXR1Q9H6X2 564 aa15.14■□□□□ 0.01
HDAC1-210ENST00000490081 PIH1D3Q9NQM4 214 aaKnown RBP15.14■□□□□ 0.01
HDAC1-210ENST00000490081 ABCF2Q9UG63 623 aa15.14■□□□□ 0.01
HDAC1-210ENST00000490081 HACL1Q9UJ83 578 aa15.14■□□□□ 0.01
HDAC1-210ENST00000490081 TTF2Q9UNY4 1162 aaKnown RBP15.14■□□□□ 0.01
HDAC1-210ENST00000490081 MECOMQ03112 1051 aa15.13■□□□□ 0.01
HDAC1-210ENST00000490081 TSHZ3Q63HK5 1081 aa15.13■□□□□ 0.01
HDAC1-210ENST00000490081 USP50Q70EL3 339 aaPredicted RBP15.13■□□□□ 0.01
HDAC1-210ENST00000490081 PNMA8AQ86V59 439 aaPredicted RBP15.13■□□□□ 0.01
HDAC1-210ENST00000490081 CERS3Q8IU89 383 aa15.13■□□□□ 0.01
HDAC1-210ENST00000490081 KIAA0825Q8IV33 1275 aa15.13■□□□□ 0.01
HDAC1-210ENST00000490081 MICALL2Q8IY33 904 aa15.13■□□□□ 0.01
HDAC1-210ENST00000490081 ZDHHC15Q96MV8 337 aa15.13■□□□□ 0.01
HDAC1-210ENST00000490081 DNAJC2Q99543 621 aaKnown RBP15.13■□□□□ 0.01
HDAC1-210ENST00000490081 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.13■□□□□ 0.019e-8■■■□□ 16.6
HDAC1-210ENST00000490081 BCL11AQ9H165 835 aa15.13■□□□□ 0.01
HDAC1-210ENST00000490081 ADARB2Q9NS39 739 aaKnown RBP15.13■□□□□ 0.01
HDAC1-210ENST00000490081 PGAP2Q9UHJ9 254 aa15.13■□□□□ 0.01
HDAC1-210ENST00000490081 JAG2Q9Y219 1238 aa15.13■□□□□ 0.01
HDAC1-210ENST00000490081 MAST2Q6P0Q8 1798 aa15.13■□□□□ 0.01
HDAC1-210ENST00000490081 GAKO14976 1311 aa15.13■□□□□ 0.01
HDAC1-210ENST00000490081 RFX7Q2KHR2 1363 aa15.12■□□□□ 0.01
HDAC1-210ENST00000490081 EPS15P42566 896 aa15.12■□□□□ 0.01
HDAC1-210ENST00000490081 UBE3CQ15386 1083 aa15.12■□□□□ 0.01
HDAC1-210ENST00000490081 CNTROBQ8N137 903 aa15.12■□□□□ 0.01
HDAC1-210ENST00000490081 SMC1BQ8NDV3 1235 aa15.12■□□□□ 0.01
HDAC1-210ENST00000490081 ZNF384Q8TF68 577 aa15.12■□□□□ 0.01
HDAC1-210ENST00000490081 ZC3H15Q8WU90 426 aaKnown RBP15.12■□□□□ 0.01
HDAC1-210ENST00000490081 TEKT1Q969V4 418 aa15.12■□□□□ 0.01
HDAC1-210ENST00000490081 MYOZ2Q9NPC6 264 aa15.12■□□□□ 0.01
HDAC1-210ENST00000490081 AK9Q5TCS8 1911 aa15.11■□□□□ 0.01
HDAC1-210ENST00000490081 ECM29Q5VYK3 1845 aa15.11■□□□□ 0.01
HDAC1-210ENST00000490081 GPR75-ASB3A0A0A6YYF3 556 aa15.11■□□□□ 0.01
HDAC1-210ENST00000490081 CRKP46108 304 aa15.11■□□□□ 0.01
HDAC1-210ENST00000490081 PPP4CP60510 307 aa15.11■□□□□ 0.01
HDAC1-210ENST00000490081 HTRA3P83110 453 aa15.11■□□□□ 0.01
HDAC1-210ENST00000490081 BMP2KLQ5H9B9 411 aa15.11■□□□□ 0.01
HDAC1-210ENST00000490081 DZIP1Q86YF9 867 aaKnown RBP15.11■□□□□ 0.01
HDAC1-210ENST00000490081 TAF1DQ9H5J8 278 aaPredicted RBP15.11■□□□□ 0.01
HDAC1-210ENST00000490081 RAI14Q9P0K7 980 aa15.11■□□□□ 0.01
HDAC1-210ENST00000490081 NDUFB9Q9Y6M9 179 aa15.11■□□□□ 0.01
HDAC1-210ENST00000490081 TCRBV5S4A2TA0A5A2 114 aa15.1■□□□□ 0.01
HDAC1-210ENST00000490081 IDH1O75874 414 aaKnown RBP15.1■□□□□ 0.01
HDAC1-210ENST00000490081 EPHX2P34913 555 aa15.1■□□□□ 0.01
HDAC1-210ENST00000490081 ADD2P35612 726 aa15.1■□□□□ 0.01
HDAC1-210ENST00000490081 DLGAP5Q15398 846 aa15.1■□□□□ 0.01
HDAC1-210ENST00000490081 SLC9C2Q5TAH2 1124 aa15.1■□□□□ 0.01
HDAC1-210ENST00000490081 NAA16Q6N069 864 aaPredicted RBP15.1■□□□□ 0.01
HDAC1-210ENST00000490081 EDC3Q96F86 508 aaKnown RBP15.1■□□□□ 0.01
HDAC1-210ENST00000490081 SPDYE2BA6NHP3 402 aa15.09■□□□□ 0.01
HDAC1-210ENST00000490081 NPM3O75607 178 aaKnown RBP15.09■□□□□ 0.01
HDAC1-210ENST00000490081 SPDYE6P0CI01 402 aa15.09■□□□□ 0.01
HDAC1-210ENST00000490081 GSPT1P15170 499 aaKnown RBP15.09■□□□□ 0.01
HDAC1-210ENST00000490081 PDE6AP16499 860 aa15.09■□□□□ 0.01
HDAC1-210ENST00000490081 SDSP20132 328 aa15.09■□□□□ 0.01
HDAC1-210ENST00000490081 CFAP100Q494V2 611 aa15.09■□□□□ 0.01
HDAC1-210ENST00000490081 IFFO2Q5TF58 517 aa15.09■□□□□ 0.01
HDAC1-210ENST00000490081 FKBP1CQ5VVH2 108 aa15.09■□□□□ 0.01
HDAC1-210ENST00000490081 APOBEC3HQ6NTF7 200 aaKnown RBP15.09■□□□□ 0.01
HDAC1-210ENST00000490081 DAGLAQ9Y4D2 1042 aa15.09■□□□□ 0.01
HDAC1-210ENST00000490081 MROH7-TTC4A0A0A0MT08 1334 aa15.09■□□□□ 0.01
HDAC1-210ENST00000490081 ADAMTSL1Q8N6G6 1762 aa15.08■□□□□ 0.01
HDAC1-210ENST00000490081 F8W031 263 aaPredicted RBP15.08■□□□□ 0
HDAC1-210ENST00000490081 HIP1O00291 1037 aa15.08■□□□□ 0
HDAC1-210ENST00000490081 WNT10BO00744 389 aa15.08■□□□□ 0
HDAC1-210ENST00000490081 RNF113AO15541 343 aaKnown RBP15.08■□□□□ 0
HDAC1-210ENST00000490081 PLCG2P16885 1265 aa15.08■□□□□ 0
HDAC1-210ENST00000490081 KIF4BQ2VIQ3 1234 aa15.08■□□□□ 0
HDAC1-210ENST00000490081 MAGEB6Q8N7X4 407 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms