RNA–Protein interactions for RNA: ENST00000489839.1

GABBR1-217, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 3

Gene GABBR1, Length 407 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-217ENST00000489839 API5Q9BZZ5 524 aaKnown RBP13.84□□□□□ -0.19
GABBR1-217ENST00000489839 SERPINA10Q9UK55 444 aa13.84□□□□□ -0.19
GABBR1-217ENST00000489839 LAMB1P07942 1786 aa13.83□□□□□ -0.19
GABBR1-217ENST00000489839 TCP10L2B9ZVM9 353 aa13.83□□□□□ -0.2
GABBR1-217ENST00000489839 MYO1BO43795 1136 aa13.83□□□□□ -0.2
GABBR1-217ENST00000489839 GJA5P36382 358 aa13.83□□□□□ -0.2
GABBR1-217ENST00000489839 TM4SF4P48230 202 aa13.83□□□□□ -0.2
GABBR1-217ENST00000489839 CAVIN4Q5BKX8 364 aa13.83□□□□□ -0.2
GABBR1-217ENST00000489839 PPP2R3BQ9Y5P8 575 aa13.83□□□□□ -0.2
GABBR1-217ENST00000489839 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.83□□□□□ -0.2
GABBR1-217ENST00000489839 INTS3Q68E01 1043 aaKnown RBP13.82□□□□□ -0.2
GABBR1-217ENST00000489839 TMEM39BQ9GZU3 492 aa13.82□□□□□ -0.2
GABBR1-217ENST00000489839 KIF16BQ96L93 1317 aa13.82□□□□□ -0.2
GABBR1-217ENST00000489839 FRAT2O75474 233 aaPredicted RBP13.81□□□□□ -0.2
GABBR1-217ENST00000489839 IFIT1P09914 478 aaKnown RBP13.81□□□□□ -0.2
GABBR1-217ENST00000489839 SLC5A1P13866 664 aa13.81□□□□□ -0.2
GABBR1-217ENST00000489839 TRIM27P14373 513 aa13.81□□□□□ -0.2
GABBR1-217ENST00000489839 ADORA1P30542 326 aa13.81□□□□□ -0.2
GABBR1-217ENST00000489839 APOBEC3HQ6NTF7 200 aaKnown RBP13.81□□□□□ -0.2
GABBR1-217ENST00000489839 REM2Q8IYK8 340 aaPredicted RBP13.81□□□□□ -0.2
GABBR1-217ENST00000489839 LPIN2Q92539 896 aa13.81□□□□□ -0.2
GABBR1-217ENST00000489839 ARHGAP45Q92619 1136 aa13.81□□□□□ -0.2
GABBR1-217ENST00000489839 SLC10A4Q96EP9 437 aa13.81□□□□□ -0.2
GABBR1-217ENST00000489839 WNK4Q96J92 1243 aa13.81□□□□□ -0.2
GABBR1-217ENST00000489839 PPP1R12BO60237 982 aaPredicted RBP13.8□□□□□ -0.2
GABBR1-217ENST00000489839 CIAO1O76071 339 aa13.8□□□□□ -0.2
GABBR1-217ENST00000489839 PHKA1P46020 1223 aa13.8□□□□□ -0.2
GABBR1-217ENST00000489839 ATP2B3Q16720 1220 aa13.8□□□□□ -0.2
GABBR1-217ENST00000489839 SUPT20HL1Q3ZLR7 823 aa13.8□□□□□ -0.2
GABBR1-217ENST00000489839 TBC1D22AQ8WUA7 517 aa13.8□□□□□ -0.2
GABBR1-217ENST00000489839 ZNF296Q8WUU4 475 aaPredicted RBP13.8□□□□□ -0.2
GABBR1-217ENST00000489839 CNKSR2Q8WXI2 1034 aa13.8□□□□□ -0.2
GABBR1-217ENST00000489839 COPRSQ9NQ92 184 aa13.8□□□□□ -0.2
GABBR1-217ENST00000489839 IGF2BP3O00425 579 aaKnown RBP eCLIP13.79□□□□□ -0.2
GABBR1-217ENST00000489839 HDLBPQ00341 1268 aaKnown RBP13.79□□□□□ -0.2
GABBR1-217ENST00000489839 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.79□□□□□ -0.2
GABBR1-217ENST00000489839 TEKT1Q969V4 418 aa13.79□□□□□ -0.2
GABBR1-217ENST00000489839 CLUAP1Q96AJ1 413 aa13.79□□□□□ -0.2
GABBR1-217ENST00000489839 CEP126Q9P2H0 1117 aa13.79□□□□□ -0.2
GABBR1-217ENST00000489839 MYH2Q9UKX2 1941 aa13.78□□□□□ -0.2
GABBR1-217ENST00000489839 GPR25O00155 361 aa13.78□□□□□ -0.2
GABBR1-217ENST00000489839 PRDX5P30044 214 aa13.78□□□□□ -0.2
GABBR1-217ENST00000489839 DIXDC1Q155Q3 683 aa13.78□□□□□ -0.2
GABBR1-217ENST00000489839 FRAT1Q92837 279 aaPredicted RBP13.78□□□□□ -0.2
GABBR1-217ENST00000489839 ZDHHC15Q96MV8 337 aa13.78□□□□□ -0.2
GABBR1-217ENST00000489839 ELP3Q9H9T3 547 aa13.78□□□□□ -0.2
GABBR1-217ENST00000489839 FBXO3Q9UK99 471 aa13.78□□□□□ -0.2
GABBR1-217ENST00000489839 AK9Q5TCS8 1911 aa13.78□□□□□ -0.2
GABBR1-217ENST00000489839 IL15P40933 162 aaPredicted RBP13.77□□□□□ -0.21
GABBR1-217ENST00000489839 IREB2P48200 963 aaKnown RBP13.77□□□□□ -0.21
GABBR1-217ENST00000489839 TIMM10P62072 90 aa13.77□□□□□ -0.21
GABBR1-217ENST00000489839 SREBF2Q12772 1141 aa13.77□□□□□ -0.21
GABBR1-217ENST00000489839 TNFAIP1Q13829 316 aa13.77□□□□□ -0.21
GABBR1-217ENST00000489839 DIEXFQ68CQ4 756 aaKnown RBP13.77□□□□□ -0.21
GABBR1-217ENST00000489839 HHIPL2Q6UWX4 724 aa13.77□□□□□ -0.21
GABBR1-217ENST00000489839 ATF7IPQ6VMQ6 1270 aa13.77□□□□□ -0.21
GABBR1-217ENST00000489839 CTU1Q7Z7A3 348 aaKnown RBP13.77□□□□□ -0.21
GABBR1-217ENST00000489839 IFNL1Q8IU54 200 aa13.77□□□□□ -0.21
GABBR1-217ENST00000489839 PTPN18Q99952 460 aa13.77□□□□□ -0.21
GABBR1-217ENST00000489839 MRIQ9BWK5 157 aa13.77□□□□□ -0.21
GABBR1-217ENST00000489839 DAGLAQ9Y4D2 1042 aa13.77□□□□□ -0.21
GABBR1-217ENST00000489839 PNMA6EA0A0J9YXQ4 647 aa13.76□□□□□ -0.21
GABBR1-217ENST00000489839 SRGAP3O43295 1099 aa13.76□□□□□ -0.21
GABBR1-217ENST00000489839 ZBTB48P10074 688 aaPredicted RBP13.76□□□□□ -0.21
GABBR1-217ENST00000489839 RGS19P49795 217 aa13.76□□□□□ -0.21
GABBR1-217ENST00000489839 HNRNPUQ00839 825 aaKnown RBP eCLIP13.76□□□□□ -0.21
GABBR1-217ENST00000489839 CAP1Q01518 475 aa13.76□□□□□ -0.21
GABBR1-217ENST00000489839 TFCP2Q12800 502 aa13.76□□□□□ -0.21
GABBR1-217ENST00000489839 MTX1Q13505 466 aa13.76□□□□□ -0.21
GABBR1-217ENST00000489839 CCDC102BQ68D86 513 aa13.76□□□□□ -0.21
GABBR1-217ENST00000489839 ANKRD13AQ8IZ07 590 aa13.76□□□□□ -0.21
GABBR1-217ENST00000489839 TMEM57Q8N5G2 664 aa13.76□□□□□ -0.21
GABBR1-217ENST00000489839 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.76□□□□□ -0.21
GABBR1-217ENST00000489839 WDR66Q8TBY9 1149 aa13.76□□□□□ -0.21
GABBR1-217ENST00000489839 CFHR5Q9BXR6 569 aa13.76□□□□□ -0.21
GABBR1-217ENST00000489839 SUGT1Q9Y2Z0 365 aa13.76□□□□□ -0.21
GABBR1-217ENST00000489839 MANSC4A6NHS7 340 aaPredicted RBP13.75□□□□□ -0.21
GABBR1-217ENST00000489839 GNAI3P08754 354 aa13.75□□□□□ -0.21
GABBR1-217ENST00000489839 NFIAQ12857 509 aa13.75□□□□□ -0.21
GABBR1-217ENST00000489839 VGLL4Q14135 290 aa13.75□□□□□ -0.21
GABBR1-217ENST00000489839 CDC42EP5Q6NZY7 148 aa13.75□□□□□ -0.21
GABBR1-217ENST00000489839 OPTNQ96CV9 577 aa13.75□□□□□ -0.21
GABBR1-217ENST00000489839 MS4A4AQ96JQ5 239 aa13.75□□□□□ -0.21
GABBR1-217ENST00000489839 PDE4DIPQ5VU43 2346 aa13.74□□□□□ -0.21
GABBR1-217ENST00000489839 MAST3O60307 1309 aa13.74□□□□□ -0.21
GABBR1-217ENST00000489839 UNCXA6NJT0 531 aa13.74□□□□□ -0.21
GABBR1-217ENST00000489839 RLBP1P12271 317 aa13.74□□□□□ -0.21
GABBR1-217ENST00000489839 TNNI2P48788 182 aa13.74□□□□□ -0.21
GABBR1-217ENST00000489839 MAP3K9P80192 1104 aa13.74□□□□□ -0.21
GABBR1-217ENST00000489839 RASGRF1Q13972 1273 aa13.74□□□□□ -0.21
GABBR1-217ENST00000489839 ZFPM1Q8IX07 1006 aa13.74□□□□□ -0.21
GABBR1-217ENST00000489839 SNCAIPQ9Y6H5 919 aa13.74□□□□□ -0.21
GABBR1-217ENST00000489839 SALL1Q9NSC2 1324 aa13.73□□□□□ -0.21
GABBR1-217ENST00000489839 A0A1B0GUL7 405 aa13.73□□□□□ -0.21
GABBR1-217ENST00000489839 TESPA1A2RU30 521 aaPredicted RBP13.73□□□□□ -0.21
GABBR1-217ENST00000489839 IPO8O15397 1037 aaKnown RBP13.73□□□□□ -0.21
GABBR1-217ENST00000489839 FKTNO75072 461 aa13.73□□□□□ -0.21
GABBR1-217ENST00000489839 SOX10P56693 466 aa13.73□□□□□ -0.21
GABBR1-217ENST00000489839 TCP10Q12799 353 aa13.73□□□□□ -0.21
GABBR1-217ENST00000489839 NOM1Q5C9Z4 860 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms