RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 ANKRD13AQ8IZ07 590 aa10.37□□□□□ -0.75
EXOSC3-206ENST00000489414 TSPYL2Q9H2G4 693 aaPredicted RBP10.37□□□□□ -0.75
EXOSC3-206ENST00000489414 POLKQ9UBT6 870 aa10.37□□□□□ -0.75
EXOSC3-206ENST00000489414 POLLQ9UGP5 575 aa10.37□□□□□ -0.75
EXOSC3-206ENST00000489414 UBN2Q6ZU65 1347 aa10.36□□□□□ -0.75
EXOSC3-206ENST00000489414 IREB2P48200 963 aaKnown RBP10.36□□□□□ -0.75
EXOSC3-206ENST00000489414 ADGRE1Q14246 886 aa10.36□□□□□ -0.75
EXOSC3-206ENST00000489414 ZNF790Q6PG37 636 aa10.36□□□□□ -0.75
EXOSC3-206ENST00000489414 PODNQ7Z5L7 613 aa10.36□□□□□ -0.75
EXOSC3-206ENST00000489414 CNTNAP3BQ96NU0 1288 aa10.36□□□□□ -0.75
EXOSC3-206ENST00000489414 NLRP3Q96P20 1036 aa10.36□□□□□ -0.75
EXOSC3-206ENST00000489414 CNTNAP3Q9BZ76 1288 aa10.36□□□□□ -0.75
EXOSC3-206ENST00000489414 CPA4Q9UI42 421 aa10.36□□□□□ -0.75
EXOSC3-206ENST00000489414 OGDHLQ9ULD0 1010 aa10.36□□□□□ -0.75
EXOSC3-206ENST00000489414 RIF1Q5UIP0 2472 aaKnown RBP10.36□□□□□ -0.75
EXOSC3-206ENST00000489414 COL4A1P02462 1669 aa10.35□□□□□ -0.75
EXOSC3-206ENST00000489414 FAM186AA6NE01 2351 aa10.35□□□□□ -0.75
EXOSC3-206ENST00000489414 NTSR2O95665 410 aa10.35□□□□□ -0.75
EXOSC3-206ENST00000489414 ELP3Q9H9T3 547 aa10.35□□□□□ -0.75
EXOSC3-206ENST00000489414 MAST4O15021 2626 aa10.35□□□□□ -0.75
EXOSC3-206ENST00000489414 MED19A0JLT2 244 aaPredicted RBP10.34□□□□□ -0.75
EXOSC3-206ENST00000489414 BTBD19C9JJ37 291 aa10.34□□□□□ -0.75
EXOSC3-206ENST00000489414 TLL1O43897 1013 aa10.34□□□□□ -0.75
EXOSC3-206ENST00000489414 USP2O75604 605 aaPredicted RBP10.34□□□□□ -0.75
EXOSC3-206ENST00000489414 SASH1O94885 1247 aa10.34□□□□□ -0.75
EXOSC3-206ENST00000489414 U2AF1L5P0DN76 240 aaPredicted RBP10.34□□□□□ -0.75
EXOSC3-206ENST00000489414 FCGRTP55899 365 aa10.34□□□□□ -0.75
EXOSC3-206ENST00000489414 U2AF1Q01081 240 aaKnown RBP eCLIP10.34□□□□□ -0.75
EXOSC3-206ENST00000489414 TRIM26Q12899 539 aaPredicted RBP10.34□□□□□ -0.75
EXOSC3-206ENST00000489414 IRF5Q13568 498 aa10.34□□□□□ -0.75
EXOSC3-206ENST00000489414 SUSD4Q5VX71 490 aa10.34□□□□□ -0.75
EXOSC3-206ENST00000489414 PCGF6Q9BYE7 350 aa10.34□□□□□ -0.75
EXOSC3-206ENST00000489414 DEFB129Q9H1M3 183 aa10.34□□□□□ -0.75
EXOSC3-206ENST00000489414 PRDM12Q9H4Q4 367 aa10.34□□□□□ -0.75
EXOSC3-206ENST00000489414 CD320Q9NPF0 282 aa10.34□□□□□ -0.75
EXOSC3-206ENST00000489414 FAM208BQ5VWN6 2430 aa10.34□□□□□ -0.75
EXOSC3-206ENST00000489414 SIPA1L3O60292 1781 aaPredicted RBP10.34□□□□□ -0.75
EXOSC3-206ENST00000489414 CACNA1HO95180 2353 aa10.33□□□□□ -0.76
EXOSC3-206ENST00000489414 C6orf229H3BNL8 230 aa10.33□□□□□ -0.76
EXOSC3-206ENST00000489414 ERC2O15083 957 aa10.33□□□□□ -0.76
EXOSC3-206ENST00000489414 FLT3LGP49771 235 aa10.33□□□□□ -0.76
EXOSC3-206ENST00000489414 GRAPQ13588 217 aa10.33□□□□□ -0.76
EXOSC3-206ENST00000489414 CSPP1Q1MSJ5 1256 aa10.33□□□□□ -0.76
EXOSC3-206ENST00000489414 TMC4Q7Z404 712 aa10.33□□□□□ -0.76
EXOSC3-206ENST00000489414 GRAPLQ8TC17 118 aaPredicted RBP10.33□□□□□ -0.76
EXOSC3-206ENST00000489414 FMNL2Q96PY5 1086 aa10.33□□□□□ -0.76
EXOSC3-206ENST00000489414 EYA3Q99504 573 aa10.33□□□□□ -0.76
EXOSC3-206ENST00000489414 PLSCR2Q9NRY7 297 aa10.33□□□□□ -0.76
EXOSC3-206ENST00000489414 DACH1Q9UI36 760 aa10.33□□□□□ -0.76
EXOSC3-206ENST00000489414 NSFL1CQ9UNZ2 370 aaKnown RBP10.33□□□□□ -0.76
EXOSC3-206ENST00000489414 USP16Q9Y5T5 823 aa10.33□□□□□ -0.76
EXOSC3-206ENST00000489414 MAP1BP46821 2468 aaKnown RBP10.33□□□□□ -0.76
EXOSC3-206ENST00000489414 GALR2O43603 387 aaPredicted RBP10.32□□□□□ -0.76
EXOSC3-206ENST00000489414 ID4P47928 161 aa10.32□□□□□ -0.76
EXOSC3-206ENST00000489414 MTMR14Q8NCE2 650 aa10.32□□□□□ -0.76
EXOSC3-206ENST00000489414 ANKS1AQ92625 1134 aa10.32□□□□□ -0.76
EXOSC3-206ENST00000489414 TIFAQ96CG3 184 aa10.32□□□□□ -0.76
EXOSC3-206ENST00000489414 FLNBO75369 2602 aaKnown RBP10.31□□□□□ -0.76
EXOSC3-206ENST00000489414 SLC10A5Q5PT55 438 aa10.31□□□□□ -0.76
EXOSC3-206ENST00000489414 NBPF10Q6P3W6 841 aaKnown RBP10.31□□□□□ -0.76
EXOSC3-206ENST00000489414 PRSS33Q8NF86 280 aa10.31□□□□□ -0.76
EXOSC3-206ENST00000489414 PPP2R3BQ9Y5P8 575 aa10.31□□□□□ -0.76
EXOSC3-206ENST00000489414 TRIOO75962 3097 aa10.31□□□□□ -0.76
EXOSC3-206ENST00000489414 DMXL1Q9Y485 3027 aa10.31□□□□□ -0.76
EXOSC3-206ENST00000489414 DOCK3Q8IZD9 2030 aa10.3□□□□□ -0.76
EXOSC3-206ENST00000489414 CETPP11597 493 aa10.3□□□□□ -0.76
EXOSC3-206ENST00000489414 IGFBP4P22692 258 aa10.3□□□□□ -0.76
EXOSC3-206ENST00000489414 PTPN5P54829 565 aa10.3□□□□□ -0.76
EXOSC3-206ENST00000489414 SUPT20HL1Q3ZLR7 823 aa10.3□□□□□ -0.76
EXOSC3-206ENST00000489414 ZBED3Q96IU2 234 aaPredicted RBP10.3□□□□□ -0.76
EXOSC3-206ENST00000489414 ZNF292O60281 2723 aa10.3□□□□□ -0.76
EXOSC3-206ENST00000489414 USP24Q9UPU5 2620 aa10.3□□□□□ -0.76
EXOSC3-206ENST00000489414 ECM29Q5VYK3 1845 aa10.29□□□□□ -0.76
EXOSC3-206ENST00000489414 ERVV-1B6SEH8 477 aa10.29□□□□□ -0.76
EXOSC3-206ENST00000489414 GPTP24298 496 aa10.29□□□□□ -0.76
EXOSC3-206ENST00000489414 GPSM2P81274 684 aa10.29□□□□□ -0.76
EXOSC3-206ENST00000489414 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.29□□□□□ -0.76
EXOSC3-206ENST00000489414 DDX46Q7L014 1031 aaKnown RBP10.29□□□□□ -0.76
EXOSC3-206ENST00000489414 OGFOD1Q8N543 542 aa10.29□□□□□ -0.76
EXOSC3-206ENST00000489414 TBC1D16Q8TBP0 767 aa10.29□□□□□ -0.76
EXOSC3-206ENST00000489414 RNPC3Q96LT9 517 aaKnown RBP10.29□□□□□ -0.76
EXOSC3-206ENST00000489414 PRKAG2Q9UGJ0 569 aa10.29□□□□□ -0.76
EXOSC3-206ENST00000489414 VPS13AQ96RL7 3174 aa10.28□□□□□ -0.76
EXOSC3-206ENST00000489414 GVINP1Q7Z2Y8 2422 aa10.28□□□□□ -0.76
EXOSC3-206ENST00000489414 USP17L3A6NCW0 530 aa10.28□□□□□ -0.76
EXOSC3-206ENST00000489414 USP17L4A6NCW7 530 aa10.28□□□□□ -0.76
EXOSC3-206ENST00000489414 BCRP11274 1271 aa10.28□□□□□ -0.76
EXOSC3-206ENST00000489414 ALADP13716 330 aa10.28□□□□□ -0.76
EXOSC3-206ENST00000489414 NBPF12Q5TAG4 269 aaPredicted RBP10.28□□□□□ -0.76
EXOSC3-206ENST00000489414 SULT6B1Q6IMI4 303 aa10.28□□□□□ -0.76
EXOSC3-206ENST00000489414 USP17L1Q7RTZ2 530 aa10.28□□□□□ -0.76
EXOSC3-206ENST00000489414 ZC3H12CQ9C0D7 883 aaKnown RBP10.28□□□□□ -0.76
EXOSC3-206ENST00000489414 TAOK2Q9UL54 1235 aa10.28□□□□□ -0.76
EXOSC3-206ENST00000489414 ASPMQ8IZT6 3477 aa10.27□□□□□ -0.76
EXOSC3-206ENST00000489414 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.27□□□□□ -0.77
EXOSC3-206ENST00000489414 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.27□□□□□ -0.77
EXOSC3-206ENST00000489414 VGLL4Q14135 290 aa10.27□□□□□ -0.77
EXOSC3-206ENST00000489414 RIC3Q7Z5B4 369 aa10.27□□□□□ -0.77
EXOSC3-206ENST00000489414 ZNF34Q8IZ26 560 aa10.27□□□□□ -0.77
EXOSC3-206ENST00000489414 HMX1Q9NP08 348 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 271.9 ms