RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 ANKLE1Q8NAG6 615 aa15.03■□□□□ -0
HDAC6-233ENST00000489352 DIS3LQ8TF46 1054 aaKnown RBP15.03■□□□□ -0
HDAC6-233ENST00000489352 TAOK2Q9UL54 1235 aa15.03■□□□□ -0
HDAC6-233ENST00000489352 ADGRA2Q96PE1 1338 aa15.02■□□□□ -0
HDAC6-233ENST00000489352 SPDYE5A6NIY4 337 aa15.02■□□□□ -0
HDAC6-233ENST00000489352 PER1O15534 1290 aaPredicted RBP15.02■□□□□ -0
HDAC6-233ENST00000489352 ELNP15502 786 aa15.02■□□□□ -0
HDAC6-233ENST00000489352 MAP3K12Q12852 859 aa15.02■□□□□ -0
HDAC6-233ENST00000489352 TJAP1Q5JTD0 557 aa15.02■□□□□ -0
HDAC6-233ENST00000489352 CRISPLD2Q9H0B8 497 aa15.02■□□□□ -0
HDAC6-233ENST00000489352 TIMELESSQ9UNS1 1208 aa15.02■□□□□ -0
HDAC6-233ENST00000489352 MINPP1Q9UNW1 487 aa15.02■□□□□ -0
HDAC6-233ENST00000489352 LEMD3Q9Y2U8 911 aa15.02■□□□□ -0
HDAC6-233ENST00000489352 PCDHAC2Q9Y5I4 1007 aa15.02■□□□□ -0
HDAC6-233ENST00000489352 PDHXO00330 501 aa15.01□□□□□ -0.01
HDAC6-233ENST00000489352 KCNJ4P48050 445 aa15.01□□□□□ -0.01
HDAC6-233ENST00000489352 TNNI2P48788 182 aa15.01□□□□□ -0.01
HDAC6-233ENST00000489352 TRIM28Q13263 835 aaKnown RBP15.01□□□□□ -0.01
HDAC6-233ENST00000489352 TXNRD3Q86VQ6 643 aa15.01□□□□□ -0.01
HDAC6-233ENST00000489352 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.01□□□□□ -0.01
HDAC6-233ENST00000489352 PXYLP1Q8TE99 480 aa15.01□□□□□ -0.01
HDAC6-233ENST00000489352 PAK6Q9NQU5 681 aaPredicted RBP15.01□□□□□ -0.01
HDAC6-233ENST00000489352 BSDC1Q9NW68 430 aaPredicted RBP15.01□□□□□ -0.01
HDAC6-233ENST00000489352 GABRQQ9UN88 632 aa15.01□□□□□ -0.01
HDAC6-233ENST00000489352 IRF6O14896 467 aa15□□□□□ -0.01
HDAC6-233ENST00000489352 MDM2Q00987 491 aaPredicted RBP15□□□□□ -0.01
HDAC6-233ENST00000489352 C11orf49Q9H6J7 331 aa15□□□□□ -0.01
HDAC6-233ENST00000489352 CHPF2Q9P2E5 772 aa15□□□□□ -0.01
HDAC6-233ENST00000489352 FLT3LGP49771 235 aa14.99□□□□□ -0.01
HDAC6-233ENST00000489352 PPIL2Q13356 520 aa14.99□□□□□ -0.01
HDAC6-233ENST00000489352 ANKRD23Q86SG2 305 aa14.99□□□□□ -0.01
HDAC6-233ENST00000489352 DDX60LQ5H9U9 1706 aaKnown RBP14.99□□□□□ -0.01
HDAC6-233ENST00000489352 MYH3P11055 1940 aa14.98□□□□□ -0.01
HDAC6-233ENST00000489352 FOSL2P15408 326 aa14.98□□□□□ -0.01
HDAC6-233ENST00000489352 NFE2L2Q16236 605 aa14.98□□□□□ -0.01
HDAC6-233ENST00000489352 RIC3Q7Z5B4 369 aa14.98□□□□□ -0.01
HDAC6-233ENST00000489352 MYLIPQ8WY64 445 aa14.98□□□□□ -0.01
HDAC6-233ENST00000489352 LBHD1Q9BQE6 289 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-233ENST00000489352 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.98□□□□□ -0.01
HDAC6-233ENST00000489352 ZNF70Q9UC06 446 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-233ENST00000489352 TCP10L2B9ZVM9 353 aa14.97□□□□□ -0.01
HDAC6-233ENST00000489352 CERS5Q8N5B7 392 aa14.97□□□□□ -0.01
HDAC6-233ENST00000489352 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.97□□□□□ -0.01
HDAC6-233ENST00000489352 ZKSCAN4Q969J2 545 aaPredicted RBP14.97□□□□□ -0.01
HDAC6-233ENST00000489352 WRNIP1Q96S55 665 aa14.97□□□□□ -0.01
HDAC6-233ENST00000489352 PARK7Q99497 189 aaKnown RBP14.97□□□□□ -0.01
HDAC6-233ENST00000489352 ANKRD2Q9GZV1 360 aa14.97□□□□□ -0.01
HDAC6-233ENST00000489352 SEMA6BQ9H3T3 888 aa14.97□□□□□ -0.01
HDAC6-233ENST00000489352 CD209Q9NNX6 404 aa14.97□□□□□ -0.01
HDAC6-233ENST00000489352 TNPO2O14787 897 aaKnown RBP14.96□□□□□ -0.01
HDAC6-233ENST00000489352 PCCAP05165 728 aaPredicted RBP14.96□□□□□ -0.01
HDAC6-233ENST00000489352 IGHMBP2P38935 993 aaKnown RBP14.96□□□□□ -0.01
HDAC6-233ENST00000489352 ARAP2Q8WZ64 1704 aa14.96□□□□□ -0.01
HDAC6-233ENST00000489352 JARID2Q92833 1246 aaPredicted RBP14.96□□□□□ -0.01
HDAC6-233ENST00000489352 HOOK2Q96ED9 719 aa14.96□□□□□ -0.01
HDAC6-233ENST00000489352 TMEM39BQ9GZU3 492 aa14.96□□□□□ -0.01
HDAC6-233ENST00000489352 TDRD3Q9H7E2 651 aaKnown RBP14.96□□□□□ -0.01
HDAC6-233ENST00000489352 DBF4Q9UBU7 674 aaPredicted RBP14.96□□□□□ -0.01
HDAC6-233ENST00000489352 SNCAIPQ9Y6H5 919 aa14.96□□□□□ -0.01
HDAC6-233ENST00000489352 MAPK8IP3Q9UPT6 1336 aa14.95□□□□□ -0.02
HDAC6-233ENST00000489352 PPATQ06203 517 aa14.95□□□□□ -0.02
HDAC6-233ENST00000489352 GOLGA2Q08379 1002 aa14.95□□□□□ -0.02
HDAC6-233ENST00000489352 IRF5Q13568 498 aa14.95□□□□□ -0.02
HDAC6-233ENST00000489352 SPDYE2Q495Y8 402 aa14.95□□□□□ -0.02
HDAC6-233ENST00000489352 HDGFL1Q5TGJ6 251 aa14.95□□□□□ -0.02
HDAC6-233ENST00000489352 TEPSINQ96N21 525 aa14.95□□□□□ -0.02
HDAC6-233ENST00000489352 BABAM1Q9NWV8 329 aa14.95□□□□□ -0.02
HDAC6-233ENST00000489352 HYPKQ9NX55 129 aa14.95□□□□□ -0.02
HDAC6-233ENST00000489352 BDP1A6H8Y1 2624 aa14.95□□□□□ -0.02
HDAC6-233ENST00000489352 NCOR1O75376 2440 aa14.94□□□□□ -0.02
HDAC6-233ENST00000489352 CCDC191Q8NCU4 936 aa14.94□□□□□ -0.02
HDAC6-233ENST00000489352 COA7Q96BR5 231 aa14.94□□□□□ -0.02
HDAC6-233ENST00000489352 PNNQ9H307 717 aaKnown RBP14.94□□□□□ -0.02
HDAC6-233ENST00000489352 CWC25Q9NXE8 425 aaPredicted RBP14.94□□□□□ -0.02
HDAC6-233ENST00000489352 AK9Q5TCS8 1911 aa14.94□□□□□ -0.02
HDAC6-233ENST00000489352 DOCK3Q8IZD9 2030 aa14.93□□□□□ -0.02
HDAC6-233ENST00000489352 AOX1Q06278 1338 aa14.93□□□□□ -0.02
HDAC6-233ENST00000489352 KLRK1P26718 216 aa14.93□□□□□ -0.02
HDAC6-233ENST00000489352 CTSWP56202 376 aa14.93□□□□□ -0.02
HDAC6-233ENST00000489352 FKBP1AP62942 108 aaKnown RBP14.93□□□□□ -0.02
HDAC6-233ENST00000489352 CDAN1Q8IWY9 1227 aa14.93□□□□□ -0.02
HDAC6-233ENST00000489352 MPHOSPH8Q99549 860 aa14.93□□□□□ -0.02
HDAC6-233ENST00000489352 MYD88Q99836 296 aa14.93□□□□□ -0.02
HDAC6-233ENST00000489352 HMX1Q9NP08 348 aaPredicted RBP14.93□□□□□ -0.02
HDAC6-233ENST00000489352 HCN4Q9Y3Q4 1203 aa14.93□□□□□ -0.02
HDAC6-233ENST00000489352 CDH23Q9H251 3354 aa14.92□□□□□ -0.02
HDAC6-233ENST00000489352 BCRP11274 1271 aa14.92□□□□□ -0.02
HDAC6-233ENST00000489352 ZNF804AQ7Z570 1209 aa14.92□□□□□ -0.02
HDAC6-233ENST00000489352 IL27Q8NEV9 243 aa14.92□□□□□ -0.02
HDAC6-233ENST00000489352 COL2A1P02458 1487 aaPredicted RBP14.91□□□□□ -0.02
HDAC6-233ENST00000489352 CYP2C8P10632 490 aa14.91□□□□□ -0.02
HDAC6-233ENST00000489352 DCAF15Q66K64 600 aa14.91□□□□□ -0.02
HDAC6-233ENST00000489352 C1QTNF1Q9BXJ1 281 aa14.91□□□□□ -0.02
HDAC6-233ENST00000489352 GREM2Q9H772 168 aa14.91□□□□□ -0.02
HDAC6-233ENST00000489352 PRKAG2Q9UGJ0 569 aa14.91□□□□□ -0.02
HDAC6-233ENST00000489352 SERPINA10Q9UK55 444 aa14.91□□□□□ -0.02
HDAC6-233ENST00000489352 DZIP1LQ8IYY4 767 aaKnown RBP14.9□□□□□ -0.02
HDAC6-233ENST00000489352 TTLL11Q8NHH1 800 aa14.9□□□□□ -0.02
HDAC6-233ENST00000489352 TTF2Q9UNY4 1162 aaKnown RBP14.9□□□□□ -0.02
HDAC6-233ENST00000489352 JAG2Q9Y219 1238 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms