RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 UBE2Q2LH0YL09 131 aa29.35■■■□□ 2.29
RNF38-208ENST00000488058 MS4A1P11836 297 aa29.35■■■□□ 2.29
RNF38-208ENST00000488058 ATP8B2P98198 1209 aa29.35■■■□□ 2.29
RNF38-208ENST00000488058 NOGQ13253 232 aa29.35■■■□□ 2.29
RNF38-208ENST00000488058 COL13A1Q5TAT6 717 aaPredicted RBP29.35■■■□□ 2.29
RNF38-208ENST00000488058 NEUROD6Q96NK8 337 aa29.35■■■□□ 2.29
RNF38-208ENST00000488058 CTCFP49711 727 aaPredicted RBP29.34■■■□□ 2.29
RNF38-208ENST00000488058 OS9Q13438 667 aaPredicted RBP29.34■■■□□ 2.29
RNF38-208ENST00000488058 CCDC102BQ68D86 513 aa29.34■■■□□ 2.29
RNF38-208ENST00000488058 TEKT1Q969V4 418 aa29.34■■■□□ 2.29
RNF38-208ENST00000488058 CCDC102AQ96A19 550 aa29.34■■■□□ 2.29
RNF38-208ENST00000488058 ZNF70Q9UC06 446 aaPredicted RBP29.34■■■□□ 2.29
RNF38-208ENST00000488058 PCNTO95613 3336 aa29.33■■■□□ 2.29
RNF38-208ENST00000488058 POLA2Q14181 598 aa29.33■■■□□ 2.29
RNF38-208ENST00000488058 XAGE2Q96GT9 111 aa29.33■■■□□ 2.29
RNF38-208ENST00000488058 ZIC5Q96T25 663 aa29.33■■■□□ 2.29
RNF38-208ENST00000488058 DENND2AQ9ULE3 1009 aa29.33■■■□□ 2.29
RNF38-208ENST00000488058 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.33■■■□□ 2.29
RNF38-208ENST00000488058 MAST3O60307 1309 aa29.33■■■□□ 2.29
RNF38-208ENST00000488058 FAM155AB1AL88 458 aaPredicted RBP29.32■■■□□ 2.28
RNF38-208ENST00000488058 SPDYE2Q495Y8 402 aa29.32■■■□□ 2.28
RNF38-208ENST00000488058 SUGT1Q9Y2Z0 365 aa29.32■■■□□ 2.28
RNF38-208ENST00000488058 PPP2R3BQ9Y5P8 575 aa29.32■■■□□ 2.28
RNF38-208ENST00000488058 HDLBPQ00341 1268 aaKnown RBP29.31■■■□□ 2.28
RNF38-208ENST00000488058 ARMC9Q7Z3E5 817 aa29.31■■■□□ 2.28
RNF38-208ENST00000488058 SSH3Q8TE77 659 aa29.31■■■□□ 2.28
RNF38-208ENST00000488058 SEMA3EO15041 775 aa29.3■■■□□ 2.28
RNF38-208ENST00000488058 SURF6O75683 361 aaKnown RBP29.3■■■□□ 2.28
RNF38-208ENST00000488058 SLC10A3P09131 477 aa29.3■■■□□ 2.28
RNF38-208ENST00000488058 TNFAIP1Q13829 316 aa29.3■■■□□ 2.28
RNF38-208ENST00000488058 RASA3Q14644 834 aa29.3■■■□□ 2.28
RNF38-208ENST00000488058 MVPQ14764 893 aaKnown RBP29.3■■■□□ 2.28
RNF38-208ENST00000488058 FZD1Q9UP38 647 aa29.3■■■□□ 2.28
RNF38-208ENST00000488058 TCP10L2B9ZVM9 353 aa29.29■■■□□ 2.28
RNF38-208ENST00000488058 LBX1P52954 281 aa29.29■■■□□ 2.28
RNF38-208ENST00000488058 GORABQ5T7V8 394 aa29.29■■■□□ 2.28
RNF38-208ENST00000488058 RASAL3Q86YV0 1011 aa29.29■■■□□ 2.28
RNF38-208ENST00000488058 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.29■■■□□ 2.28
RNF38-208ENST00000488058 ANGEL1Q9UNK9 670 aaKnown RBP29.29■■■□□ 2.28
RNF38-208ENST00000488058 COG6Q9Y2V7 657 aa29.29■■■□□ 2.28
RNF38-208ENST00000488058 PRDX5P30044 214 aa29.28■■■□□ 2.28
RNF38-208ENST00000488058 KIF23Q02241 960 aaPredicted RBP29.28■■■□□ 2.28
RNF38-208ENST00000488058 LDHBP07195 334 aaKnown RBP29.27■■■□□ 2.28
RNF38-208ENST00000488058 HSPA8P11142 646 aaKnown RBP29.27■■■□□ 2.28
RNF38-208ENST00000488058 SUPT20HL1Q3ZLR7 823 aa29.27■■■□□ 2.28
RNF38-208ENST00000488058 NBPF12Q5TAG4 269 aaPredicted RBP29.27■■■□□ 2.28
RNF38-208ENST00000488058 ZDHHC15Q96MV8 337 aa29.27■■■□□ 2.28
RNF38-208ENST00000488058 TSKSQ9UJT2 592 aa29.27■■■□□ 2.28
RNF38-208ENST00000488058 TNNI2P48788 182 aa29.26■■■□□ 2.27
RNF38-208ENST00000488058 CACNB3P54284 484 aa29.26■■■□□ 2.27
RNF38-208ENST00000488058 RASGRF1Q13972 1273 aa29.26■■■□□ 2.27
RNF38-208ENST00000488058 IFFO2Q5TF58 517 aa29.26■■■□□ 2.27
RNF38-208ENST00000488058 CEP85Q6P2H3 762 aa29.26■■■□□ 2.27
RNF38-208ENST00000488058 TMOD2Q9NZR1 351 aa29.26■■■□□ 2.27
RNF38-208ENST00000488058 SSC5DA1L4H1 1573 aa29.26■■■□□ 2.27
RNF38-208ENST00000488058 MRIQ9BWK5 157 aa29.25■■■□□ 2.27
RNF38-208ENST00000488058 SALL1Q9NSC2 1324 aa29.24■■■□□ 2.27
RNF38-208ENST00000488058 PPP1R12BO60237 982 aaPredicted RBP29.24■■■□□ 2.27
RNF38-208ENST00000488058 DIXDC1Q155Q3 683 aa29.24■■■□□ 2.27
RNF38-208ENST00000488058 HHIPL2Q6UWX4 724 aa29.24■■■□□ 2.27
RNF38-208ENST00000488058 ABCF2Q9UG63 623 aa29.24■■■□□ 2.27
RNF38-208ENST00000488058 DDX19BQ9UMR2 479 aa29.24■■■□□ 2.27
RNF38-208ENST00000488058 APOBEC3HQ6NTF7 200 aaKnown RBP29.23■■■□□ 2.27
RNF38-208ENST00000488058 TNS4Q8IZW8 715 aa29.23■■■□□ 2.27
RNF38-208ENST00000488058 ZGPATQ8N5A5 531 aaKnown RBP29.23■■■□□ 2.27
RNF38-208ENST00000488058 PRDM10Q9NQV6 1147 aa29.23■■■□□ 2.27
RNF38-208ENST00000488058 MKRN3Q13064 507 aaKnown RBP29.22■■■□□ 2.27
RNF38-208ENST00000488058 TNNI3KQ59H18 835 aa29.22■■■□□ 2.27
RNF38-208ENST00000488058 TMEM39BQ9GZU3 492 aa29.22■■■□□ 2.27
RNF38-208ENST00000488058 DAGLAQ9Y4D2 1042 aa29.22■■■□□ 2.27
RNF38-208ENST00000488058 FPGT-TNNI3KV9GXZ4 949 aa29.22■■■□□ 2.27
RNF38-208ENST00000488058 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.21■■■□□ 2.27
RNF38-208ENST00000488058 YTHDC1Q96MU7 727 aaKnown RBP29.21■■■□□ 2.27
RNF38-208ENST00000488058 CA12O43570 354 aa29.2■■■□□ 2.26
RNF38-208ENST00000488058 DZIP1Q86YF9 867 aaKnown RBP29.2■■■□□ 2.26
RNF38-208ENST00000488058 CDAN1Q8IWY9 1227 aa29.2■■■□□ 2.26
RNF38-208ENST00000488058 NOP58Q9Y2X3 529 aaKnown RBP29.2■■■□□ 2.26
RNF38-208ENST00000488058 PDS5AQ29RF7 1337 aaKnown RBP29.2■■■□□ 2.26
RNF38-208ENST00000488058 ZBTB22O15209 634 aa29.19■■■□□ 2.26
RNF38-208ENST00000488058 LDLRAD1Q5T700 205 aa29.19■■■□□ 2.26
RNF38-208ENST00000488058 GPR108Q9NPR9 543 aa29.19■■■□□ 2.26
RNF38-208ENST00000488058 HMG20BQ9P0W2 317 aa29.19■■■□□ 2.26
RNF38-208ENST00000488058 MYH2Q9UKX2 1941 aa29.19■■■□□ 2.26
RNF38-208ENST00000488058 AKAP11Q9UKA4 1901 aa29.18■■■□□ 2.26
RNF38-208ENST00000488058 IREB2P48200 963 aaKnown RBP29.18■■■□□ 2.26
RNF38-208ENST00000488058 SPTY2D1Q68D10 685 aaPredicted RBP29.18■■■□□ 2.26
RNF38-208ENST00000488058 PI16Q6UXB8 463 aa29.18■■■□□ 2.26
RNF38-208ENST00000488058 TEPSINQ96N21 525 aa29.18■■■□□ 2.26
RNF38-208ENST00000488058 CSRNP1Q96S65 589 aa29.18■■■□□ 2.26
RNF38-208ENST00000488058 DBNDD2Q9BQY9 259 aa29.18■■■□□ 2.26
RNF38-208ENST00000488058 EXOC6BQ9Y2D4 811 aa29.18■■■□□ 2.26
RNF38-208ENST00000488058 UQCRFS1P1P0C7P4 283 aa29.17■■■□□ 2.26
RNF38-208ENST00000488058 ARID4AP29374 1257 aaPredicted RBP29.17■■■□□ 2.26
RNF38-208ENST00000488058 MAP3K11Q16584 847 aa29.17■■■□□ 2.26
RNF38-208ENST00000488058 TTC39AQ5SRH9 613 aa29.17■■■□□ 2.26
RNF38-208ENST00000488058 C20orf194Q5TEA3 1177 aa29.17■■■□□ 2.26
RNF38-208ENST00000488058 SPATA5Q8NB90 893 aa29.17■■■□□ 2.26
RNF38-208ENST00000488058 USP2O75604 605 aaPredicted RBP29.16■■■□□ 2.26
RNF38-208ENST00000488058 CDC42EP5Q6NZY7 148 aa29.16■■■□□ 2.26
RNF38-208ENST00000488058 ERICH6Q7L0X2 663 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms