RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 TSPYL4Q9UJ04 414 aa15.3■□□□□ 0.04
TRIM56-204ENST00000487252 ARAP2Q8WZ64 1704 aa15.29■□□□□ 0.04
TRIM56-204ENST00000487252 SYN1P17600 705 aa15.29■□□□□ 0.04
TRIM56-204ENST00000487252 CFAP100Q494V2 611 aa15.29■□□□□ 0.04
TRIM56-204ENST00000487252 ANKLE1Q8NAG6 615 aa15.29■□□□□ 0.04
TRIM56-204ENST00000487252 PXYLP1Q8TE99 480 aa15.29■□□□□ 0.04
TRIM56-204ENST00000487252 VEZTQ9HBM0 779 aa15.29■□□□□ 0.04
TRIM56-204ENST00000487252 BSDC1Q9NW68 430 aaPredicted RBP15.29■□□□□ 0.04
TRIM56-204ENST00000487252 BABAM1Q9NWV8 329 aa15.29■□□□□ 0.04
TRIM56-204ENST00000487252 PDE8AO60658 829 aa15.28■□□□□ 0.04
TRIM56-204ENST00000487252 ECM2O94769 699 aaPredicted RBP15.28■□□□□ 0.04
TRIM56-204ENST00000487252 INHAP05111 366 aa15.28■□□□□ 0.04
TRIM56-204ENST00000487252 SNAPC2Q13487 334 aa15.28■□□□□ 0.04
TRIM56-204ENST00000487252 CDAN1Q8IWY9 1227 aa15.28■□□□□ 0.04
TRIM56-204ENST00000487252 CDX2Q99626 313 aaPredicted RBP15.28■□□□□ 0.04
TRIM56-204ENST00000487252 GABRQQ9UN88 632 aa15.28■□□□□ 0.04
TRIM56-204ENST00000487252 CSADQ9Y600 493 aa15.28■□□□□ 0.04
TRIM56-204ENST00000487252 SNCAIPQ9Y6H5 919 aa15.28■□□□□ 0.04
TRIM56-204ENST00000487252 SPEF2Q9C093 1822 aa15.27■□□□□ 0.04
TRIM56-204ENST00000487252 SYNGAP1Q96PV0 1343 aa15.27■□□□□ 0.04
TRIM56-204ENST00000487252 IRF6O14896 467 aa15.27■□□□□ 0.04
TRIM56-204ENST00000487252 KLRK1P26718 216 aa15.27■□□□□ 0.04
TRIM56-204ENST00000487252 TNFAIP1Q13829 316 aa15.27■□□□□ 0.04
TRIM56-204ENST00000487252 ERO1BQ86YB8 467 aa15.27■□□□□ 0.04
TRIM56-204ENST00000487252 FAM161BQ96MY7 647 aa15.27■□□□□ 0.04
TRIM56-204ENST00000487252 PLEKHF1Q96S99 279 aa15.27■□□□□ 0.04
TRIM56-204ENST00000487252 CHPF2Q9P2E5 772 aa15.27■□□□□ 0.04
TRIM56-204ENST00000487252 LEMD3Q9Y2U8 911 aa15.27■□□□□ 0.04
TRIM56-204ENST00000487252 ADCY3O60266 1144 aa15.26■□□□□ 0.03
TRIM56-204ENST00000487252 BCRP11274 1271 aa15.26■□□□□ 0.03
TRIM56-204ENST00000487252 NFE2L2Q16236 605 aa15.26■□□□□ 0.03
TRIM56-204ENST00000487252 SPDYE2Q495Y8 402 aa15.26■□□□□ 0.03
TRIM56-204ENST00000487252 ANKRD23Q86SG2 305 aa15.26■□□□□ 0.03
TRIM56-204ENST00000487252 PCCAP05165 728 aaPredicted RBP15.25■□□□□ 0.03
TRIM56-204ENST00000487252 FCGRTP55899 365 aa15.25■□□□□ 0.03
TRIM56-204ENST00000487252 PPIL2Q13356 520 aa15.25■□□□□ 0.03
TRIM56-204ENST00000487252 IRF5Q13568 498 aa15.25■□□□□ 0.03
TRIM56-204ENST00000487252 CCDC85AQ96PX6 553 aaPredicted RBP15.25■□□□□ 0.03
TRIM56-204ENST00000487252 CDC5LQ99459 802 aaKnown RBP15.25■□□□□ 0.03
TRIM56-204ENST00000487252 CD209Q9NNX6 404 aa15.25■□□□□ 0.03
TRIM56-204ENST00000487252 DDX60LQ5H9U9 1706 aaKnown RBP15.25■□□□□ 0.03
TRIM56-204ENST00000487252 NCOR1O75376 2440 aa15.25■□□□□ 0.03
TRIM56-204ENST00000487252 BDP1A6H8Y1 2624 aa15.24■□□□□ 0.03
TRIM56-204ENST00000487252 ELNP15502 786 aa15.24■□□□□ 0.03
TRIM56-204ENST00000487252 FKBP1AP62942 108 aaKnown RBP15.24■□□□□ 0.03
TRIM56-204ENST00000487252 TJAP1Q5JTD0 557 aa15.24■□□□□ 0.03
TRIM56-204ENST00000487252 ZNF697Q5TEC3 545 aa15.24■□□□□ 0.03
TRIM56-204ENST00000487252 NBPF3Q9H094 633 aa15.24■□□□□ 0.03
TRIM56-204ENST00000487252 PDHXO00330 501 aa15.23■□□□□ 0.03
TRIM56-204ENST00000487252 FLT3LGP49771 235 aa15.23■□□□□ 0.03
TRIM56-204ENST00000487252 MOGSQ13724 837 aa15.23■□□□□ 0.03
TRIM56-204ENST00000487252 ZNF70Q9UC06 446 aaPredicted RBP15.23■□□□□ 0.03
TRIM56-204ENST00000487252 ARIH1Q9Y4X5 557 aaPredicted RBP15.23■□□□□ 0.03
TRIM56-204ENST00000487252 PIEZO1Q92508 2521 aa15.22■□□□□ 0.03
TRIM56-204ENST00000487252 CLSPNQ9HAW4 1339 aa15.22■□□□□ 0.03
TRIM56-204ENST00000487252 MAP3K12Q12852 859 aa15.22■□□□□ 0.03
TRIM56-204ENST00000487252 CCDC191Q8NCU4 936 aa15.22■□□□□ 0.03
TRIM56-204ENST00000487252 SEMA6BQ9H3T3 888 aa15.22■□□□□ 0.03
TRIM56-204ENST00000487252 MYH3P11055 1940 aa15.21■□□□□ 0.03
TRIM56-204ENST00000487252 TMEM39BQ9GZU3 492 aa15.21■□□□□ 0.03
TRIM56-204ENST00000487252 DBF4Q9UBU7 674 aaPredicted RBP15.21■□□□□ 0.03
TRIM56-204ENST00000487252 DNAH12Q6ZR08 3092 aa15.2■□□□□ 0.02
TRIM56-204ENST00000487252 TMEM265A0A087WTH1 108 aa15.2■□□□□ 0.02
TRIM56-204ENST00000487252 F8W031 263 aaPredicted RBP15.2■□□□□ 0.02
TRIM56-204ENST00000487252 PPATQ06203 517 aa15.2■□□□□ 0.02
TRIM56-204ENST00000487252 KRT24Q2M2I5 525 aa15.2■□□□□ 0.02
TRIM56-204ENST00000487252 C15orf52Q6ZUT6 534 aaKnown RBP15.2■□□□□ 0.02
TRIM56-204ENST00000487252 TTLL11Q8NHH1 800 aa15.2■□□□□ 0.02
TRIM56-204ENST00000487252 ZKSCAN4Q969J2 545 aaPredicted RBP15.2■□□□□ 0.02
TRIM56-204ENST00000487252 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.2■□□□□ 0.022e-6■□□□□ 10.1
TRIM56-204ENST00000487252 C11orf49Q9H6J7 331 aa15.2■□□□□ 0.02
TRIM56-204ENST00000487252 KCNH4Q9UQ05 1017 aa15.2■□□□□ 0.02
TRIM56-204ENST00000487252 PFASO15067 1338 aa15.19■□□□□ 0.02
TRIM56-204ENST00000487252 DOCK3Q8IZD9 2030 aa15.19■□□□□ 0.02
TRIM56-204ENST00000487252 NEFMP07197 916 aa15.19■□□□□ 0.02
TRIM56-204ENST00000487252 IL1R1P14778 569 aa15.19■□□□□ 0.02
TRIM56-204ENST00000487252 PPP2R1AP30153 589 aa15.19■□□□□ 0.02
TRIM56-204ENST00000487252 CTSWP56202 376 aa15.19■□□□□ 0.02
TRIM56-204ENST00000487252 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.19■□□□□ 0.02
TRIM56-204ENST00000487252 GREM2Q9H772 168 aa15.19■□□□□ 0.02
TRIM56-204ENST00000487252 TDRD3Q9H7E2 651 aaKnown RBP15.19■□□□□ 0.02
TRIM56-204ENST00000487252 HOXB7P09629 217 aa15.18■□□□□ 0.02
TRIM56-204ENST00000487252 MDM2Q00987 491 aaPredicted RBP15.18■□□□□ 0.02
TRIM56-204ENST00000487252 CNGB1Q14028 1251 aaPredicted RBP15.18■□□□□ 0.02
TRIM56-204ENST00000487252 MYLIPQ8WY64 445 aa15.18■□□□□ 0.02
TRIM56-204ENST00000487252 JARID2Q92833 1246 aaPredicted RBP15.18■□□□□ 0.02
TRIM56-204ENST00000487252 WRNIP1Q96S55 665 aa15.18■□□□□ 0.02
TRIM56-204ENST00000487252 PARK7Q99497 189 aaKnown RBP15.18■□□□□ 0.02
TRIM56-204ENST00000487252 ANKRD2Q9GZV1 360 aa15.18■□□□□ 0.02
TRIM56-204ENST00000487252 HYPKQ9NX55 129 aa15.18■□□□□ 0.02
TRIM56-204ENST00000487252 SERPINA10Q9UK55 444 aa15.18■□□□□ 0.02
TRIM56-204ENST00000487252 OGDHLQ9ULD0 1010 aa15.18■□□□□ 0.02
TRIM56-204ENST00000487252 COL6A1P12109 1028 aa15.17■□□□□ 0.02
TRIM56-204ENST00000487252 HDGFL1Q5TGJ6 251 aa15.17■□□□□ 0.02
TRIM56-204ENST00000487252 TTYH1Q9H313 450 aaPredicted RBP15.17■□□□□ 0.02
TRIM56-204ENST00000487252 TCP10L2B9ZVM9 353 aa15.16■□□□□ 0.02
TRIM56-204ENST00000487252 RBM5P52756 815 aaKnown RBP eCLIP15.16■□□□□ 0.02
TRIM56-204ENST00000487252 GPAT2Q6NUI2 795 aa15.16■□□□□ 0.02
TRIM56-204ENST00000487252 CWC25Q9NXE8 425 aaPredicted RBP15.16■□□□□ 0.02
TRIM56-204ENST00000487252 CYP2C8P10632 490 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms