RNA–Protein interactions for RNA: ENST00000486964.5

POLR1A-208, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5

Gene POLR1A, Length 1,427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-208ENST00000486964 CCDC129Q6ZRS4 1044 aa11.38□□□□□ -0.59
POLR1A-208ENST00000486964 TXNRD3Q86VQ6 643 aa11.38□□□□□ -0.59
POLR1A-208ENST00000486964 TMEM87AQ8NBN3 555 aa11.38□□□□□ -0.59
POLR1A-208ENST00000486964 GPT2Q8TD30 523 aa11.38□□□□□ -0.59
POLR1A-208ENST00000486964 SLC16A10Q8TF71 515 aa11.38□□□□□ -0.59
POLR1A-208ENST00000486964 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.38□□□□□ -0.594e-7■■■■□ 23.1
POLR1A-208ENST00000486964 SPON1Q9HCB6 807 aa11.38□□□□□ -0.59
POLR1A-208ENST00000486964 GNL3LQ9NVN8 582 aaKnown RBP11.38□□□□□ -0.59
POLR1A-208ENST00000486964 ZDHHC9Q9Y397 364 aa11.38□□□□□ -0.59
POLR1A-208ENST00000486964 ATP6V0A2Q9Y487 856 aa11.38□□□□□ -0.59
POLR1A-208ENST00000486964 QSER1Q2KHR3 1735 aa11.37□□□□□ -0.59
POLR1A-208ENST00000486964 M0R2C6 588 aa11.37□□□□□ -0.59
POLR1A-208ENST00000486964 SLC27A2O14975 620 aa11.37□□□□□ -0.59
POLR1A-208ENST00000486964 HSPD1P10809 573 aaKnown RBP11.37□□□□□ -0.59
POLR1A-208ENST00000486964 PDE6AP16499 860 aa11.37□□□□□ -0.59
POLR1A-208ENST00000486964 ATP2B4P23634 1241 aa11.37□□□□□ -0.59
POLR1A-208ENST00000486964 HIBADHP31937 336 aaKnown RBP11.37□□□□□ -0.59
POLR1A-208ENST00000486964 SLC9C2Q5TAH2 1124 aa11.37□□□□□ -0.59
POLR1A-208ENST00000486964 PRPF40BQ6NWY9 871 aaKnown RBP11.37□□□□□ -0.59
POLR1A-208ENST00000486964 TDRD7Q8NHU6 1098 aaKnown RBP11.37□□□□□ -0.59
POLR1A-208ENST00000486964 MASTLQ96GX5 879 aa11.37□□□□□ -0.59
POLR1A-208ENST00000486964 TTC14Q96N46 770 aa11.37□□□□□ -0.59
POLR1A-208ENST00000486964 PDGFDQ9GZP0 370 aaPredicted RBP11.37□□□□□ -0.59
POLR1A-208ENST00000486964 PUS7LQ9H0K6 701 aaKnown RBP11.37□□□□□ -0.59
POLR1A-208ENST00000486964 TSPY26PQ9H489 355 aa11.37□□□□□ -0.59
POLR1A-208ENST00000486964 ZSWIM6Q9HCJ5 1215 aa11.37□□□□□ -0.59
POLR1A-208ENST00000486964 DENND2AQ9ULE3 1009 aa11.37□□□□□ -0.59
POLR1A-208ENST00000486964 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.37□□□□□ -0.59
POLR1A-208ENST00000486964 U3KPZ7 1027 aaPredicted RBP11.37□□□□□ -0.59
POLR1A-208ENST00000486964 TAF1P21675 1872 aa11.37□□□□□ -0.59
POLR1A-208ENST00000486964 ALDH1B1P30837 517 aa11.36□□□□□ -0.59
POLR1A-208ENST00000486964 PKP1Q13835 747 aa11.36□□□□□ -0.59
POLR1A-208ENST00000486964 UVSSAQ2YD98 709 aa11.36□□□□□ -0.59
POLR1A-208ENST00000486964 VPS53Q5VIR6 699 aa11.36□□□□□ -0.59
POLR1A-208ENST00000486964 MSL1Q68DK7 614 aa11.36□□□□□ -0.59
POLR1A-208ENST00000486964 STYK1Q6J9G0 422 aa11.36□□□□□ -0.59
POLR1A-208ENST00000486964 ALDH8A1Q9H2A2 487 aaPredicted RBP11.36□□□□□ -0.59
POLR1A-208ENST00000486964 PPP1R1BQ9UD71 204 aaPredicted RBP11.36□□□□□ -0.59
POLR1A-208ENST00000486964 WWC3Q9ULE0 1092 aa11.36□□□□□ -0.59
POLR1A-208ENST00000486964 COL1A1P02452 1464 aaPredicted RBP11.36□□□□□ -0.59
POLR1A-208ENST00000486964 A0A1B0GUL6 1792 aa11.36□□□□□ -0.59
POLR1A-208ENST00000486964 AK9Q5TCS8 1911 aa11.35□□□□□ -0.59
POLR1A-208ENST00000486964 MAP3K12Q12852 859 aa11.35□□□□□ -0.59
POLR1A-208ENST00000486964 HSP90AA2PQ14568 343 aaPredicted RBP11.35□□□□□ -0.59
POLR1A-208ENST00000486964 ADCK5Q3MIX3 580 aa11.35□□□□□ -0.59
POLR1A-208ENST00000486964 TMED8Q6PL24 325 aaPredicted RBP11.35□□□□□ -0.59
POLR1A-208ENST00000486964 C7orf43Q8WVR3 580 aa11.35□□□□□ -0.59
POLR1A-208ENST00000486964 STRBPQ96SI9 672 aaKnown RBP11.35□□□□□ -0.59
POLR1A-208ENST00000486964 MAP7D2Q96T17 732 aa11.35□□□□□ -0.59
POLR1A-208ENST00000486964 RBSNQ9H1K0 784 aa11.35□□□□□ -0.59
POLR1A-208ENST00000486964 POLLQ9UGP5 575 aa11.35□□□□□ -0.59
POLR1A-208ENST00000486964 ZKSCAN5Q9Y2L8 839 aa11.35□□□□□ -0.59
POLR1A-208ENST00000486964 TAF6LQ9Y6J9 622 aa11.35□□□□□ -0.59
POLR1A-208ENST00000486964 CEP350Q5VT06 3117 aa11.35□□□□□ -0.59
POLR1A-208ENST00000486964 RPAP1Q9BWH6 1393 aaPredicted RBP11.35□□□□□ -0.59
POLR1A-208ENST00000486964 ZNF532Q9HCE3 1301 aa11.35□□□□□ -0.59
POLR1A-208ENST00000486964 SALL1Q9NSC2 1324 aa11.35□□□□□ -0.59
POLR1A-208ENST00000486964 ANKRD31Q8N7Z5 1873 aa11.35□□□□□ -0.59
POLR1A-208ENST00000486964 IDH1O75874 414 aaKnown RBP11.35□□□□□ -0.59
POLR1A-208ENST00000486964 IL1R1P14778 569 aa11.35□□□□□ -0.59
POLR1A-208ENST00000486964 KCNJ4P48050 445 aa11.35□□□□□ -0.59
POLR1A-208ENST00000486964 ALX1Q15699 326 aa11.35□□□□□ -0.59
POLR1A-208ENST00000486964 TBC1D16Q8TBP0 767 aa11.35□□□□□ -0.59
POLR1A-208ENST00000486964 ZNF384Q8TF68 577 aa11.35□□□□□ -0.59
POLR1A-208ENST00000486964 TMEM63CQ9P1W3 806 aa11.35□□□□□ -0.59
POLR1A-208ENST00000486964 ANKIB1Q9P2G1 1089 aa11.35□□□□□ -0.59
POLR1A-208ENST00000486964 GGA1Q9UJY5 639 aa11.35□□□□□ -0.59
POLR1A-208ENST00000486964 SYCE3A1L190 88 aa11.34□□□□□ -0.59
POLR1A-208ENST00000486964 PPEF1O14829 653 aaPredicted RBP11.34□□□□□ -0.59
POLR1A-208ENST00000486964 GPAA1O43292 621 aa11.34□□□□□ -0.59
POLR1A-208ENST00000486964 CYP21A2P08686 494 aa11.34□□□□□ -0.59
POLR1A-208ENST00000486964 ZKSCAN1P17029 563 aaPredicted RBP11.34□□□□□ -0.59
POLR1A-208ENST00000486964 WASHC4Q2M389 1173 aa11.34□□□□□ -0.59
POLR1A-208ENST00000486964 CCDC183Q5T5S1 534 aa11.34□□□□□ -0.59
POLR1A-208ENST00000486964 RNF20Q5VTR2 975 aa11.34□□□□□ -0.59
POLR1A-208ENST00000486964 C2CD5Q86YS7 1000 aa11.34□□□□□ -0.59
POLR1A-208ENST00000486964 ZSCAN31Q96LW9 406 aaPredicted RBP11.34□□□□□ -0.59
POLR1A-208ENST00000486964 SH2B1Q9NRF2 756 aaPredicted RBP11.34□□□□□ -0.59
POLR1A-208ENST00000486964 NSFL1CQ9UNZ2 370 aaKnown RBP11.34□□□□□ -0.59
POLR1A-208ENST00000486964 IQSEC3Q9UPP2 1182 aaPredicted RBP11.34□□□□□ -0.59
POLR1A-208ENST00000486964 H0YIN7 160 aa11.33□□□□□ -0.6
POLR1A-208ENST00000486964 FGAP02671 866 aa11.33□□□□□ -0.6
POLR1A-208ENST00000486964 COL9A3Q14050 684 aaPredicted RBP11.33□□□□□ -0.6
POLR1A-208ENST00000486964 RUFY3Q7L099 469 aa11.33□□□□□ -0.6
POLR1A-208ENST00000486964 MTERF4Q7Z6M4 381 aaKnown RBP11.33□□□□□ -0.6
POLR1A-208ENST00000486964 VPS37DQ86XT2 251 aa11.33□□□□□ -0.6
POLR1A-208ENST00000486964 MAGEB6Q8N7X4 407 aa11.33□□□□□ -0.6
POLR1A-208ENST00000486964 CD209Q9NNX6 404 aa11.33□□□□□ -0.6
POLR1A-208ENST00000486964 LIMCH1Q9UPQ0 1083 aa11.33□□□□□ -0.6
POLR1A-208ENST00000486964 GOLGB1Q14789 3259 aaKnown RBP11.32□□□□□ -0.6
POLR1A-208ENST00000486964 PATL2C9JE40 543 aaKnown RBP11.32□□□□□ -0.6
POLR1A-208ENST00000486964 UFL1O94874 794 aa11.32□□□□□ -0.6
POLR1A-208ENST00000486964 PSMA5P28066 241 aa11.32□□□□□ -0.6
POLR1A-208ENST00000486964 UBE2HP62256 183 aa11.32□□□□□ -0.6
POLR1A-208ENST00000486964 KRT32Q14532 448 aa11.32□□□□□ -0.6
POLR1A-208ENST00000486964 NSUN4Q96CB9 384 aaKnown RBP11.32□□□□□ -0.6
POLR1A-208ENST00000486964 UPF3BQ9BZI7 483 aaKnown RBP11.32□□□□□ -0.6
POLR1A-208ENST00000486964 LRP2BPQ9P2M1 347 aa11.32□□□□□ -0.6
POLR1A-208ENST00000486964 RBM27Q9P2N5 1060 aaKnown RBP11.32□□□□□ -0.6
POLR1A-208ENST00000486964 CTNNA3Q9UI47 895 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms