RNA–Protein interactions for RNA: ENST00000486524.1

SLX4-203, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 2

Gene SLX4, Length 3,075 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-203ENST00000486524 ZNF512BQ96KM6 892 aaPredicted RBP13.19□□□□□ -0.3
SLX4-203ENST00000486524 IGHMBP2P38935 993 aaKnown RBP13.18□□□□□ -0.3
SLX4-203ENST00000486524 UBE3CQ15386 1083 aa13.18□□□□□ -0.3
SLX4-203ENST00000486524 CCDC152Q4G0S7 254 aa13.18□□□□□ -0.3
SLX4-203ENST00000486524 CYB5R4Q7L1T6 521 aa13.18□□□□□ -0.3
SLX4-203ENST00000486524 CLSTN2Q9H4D0 955 aa13.18□□□□□ -0.3
SLX4-203ENST00000486524 ARMT1Q9H993 441 aa13.18□□□□□ -0.3
SLX4-203ENST00000486524 DDX19AQ9NUU7 478 aaKnown RBP13.18□□□□□ -0.3
SLX4-203ENST00000486524 ORC3Q9UBD5 711 aaPredicted RBP13.18□□□□□ -0.3
SLX4-203ENST00000486524 MBD4O95243 580 aa13.18□□□□□ -0.3
SLX4-203ENST00000486524 ADRA2BP18089 450 aa13.18□□□□□ -0.3
SLX4-203ENST00000486524 ME1P48163 572 aa13.18□□□□□ -0.3
SLX4-203ENST00000486524 ILDR1Q86SU0 546 aaPredicted RBP13.18□□□□□ -0.3
SLX4-203ENST00000486524 CCAR1Q8IX12 1150 aaKnown RBP13.18□□□□□ -0.3
SLX4-203ENST00000486524 SPC24Q8NBT2 197 aa13.18□□□□□ -0.3
SLX4-203ENST00000486524 C8orf76Q96K31 380 aa13.18□□□□□ -0.3
SLX4-203ENST00000486524 TTC12Q9H892 705 aaPredicted RBP13.18□□□□□ -0.3
SLX4-203ENST00000486524 SENP2Q9HC62 589 aa13.18□□□□□ -0.3
SLX4-203ENST00000486524 TCRBV5S4A2TA0A5A2 114 aa13.17□□□□□ -0.3
SLX4-203ENST00000486524 CTDSPL2Q05D32 466 aa13.17□□□□□ -0.3
SLX4-203ENST00000486524 MYH14Q7Z406 1995 aaKnown RBP13.17□□□□□ -0.3
SLX4-203ENST00000486524 AHDC1Q5TGY3 1603 aaPredicted RBP13.17□□□□□ -0.3
SLX4-203ENST00000486524 FAM98CQ17RN3 349 aaKnown RBP13.17□□□□□ -0.3
SLX4-203ENST00000486524 STRBPQ96SI9 672 aaKnown RBP13.17□□□□□ -0.3
SLX4-203ENST00000486524 THRAP3Q9Y2W1 955 aaKnown RBP13.17□□□□□ -0.3
SLX4-203ENST00000486524 SPATA31A5Q5VU36 1347 aa13.17□□□□□ -0.3
SLX4-203ENST00000486524 SPATA31A7Q8IWB4 1347 aa13.17□□□□□ -0.3
SLX4-203ENST00000486524 WNK3Q9BYP7 1800 aa13.17□□□□□ -0.3
SLX4-203ENST00000486524 WTIPA6NIX2 430 aaPredicted RBP13.16□□□□□ -0.3
SLX4-203ENST00000486524 DHX16O60231 1041 aaKnown RBP13.16□□□□□ -0.3
SLX4-203ENST00000486524 MAP3K12Q12852 859 aa13.16□□□□□ -0.3
SLX4-203ENST00000486524 SASS6Q6UVJ0 657 aa13.16□□□□□ -0.3
SLX4-203ENST00000486524 MICU3Q86XE3 530 aa13.16□□□□□ -0.3
SLX4-203ENST00000486524 MIGA1Q8NAN2 632 aa13.16□□□□□ -0.3
SLX4-203ENST00000486524 FAM200AQ8TCP9 573 aa13.16□□□□□ -0.3
SLX4-203ENST00000486524 ZNF396Q96N95 335 aaPredicted RBP13.16□□□□□ -0.3
SLX4-203ENST00000486524 GOLPH3LQ9H4A5 285 aa13.16□□□□□ -0.3
SLX4-203ENST00000486524 NEDD4P46934 1319 aa13.16□□□□□ -0.3
SLX4-203ENST00000486524 PRKAB2O43741 272 aa13.16□□□□□ -0.3
SLX4-203ENST00000486524 NTSR2O95665 410 aa13.16□□□□□ -0.3
SLX4-203ENST00000486524 EVCP57679 992 aa13.16□□□□□ -0.3
SLX4-203ENST00000486524 NFXL1Q6ZNB6 911 aa13.16□□□□□ -0.3
SLX4-203ENST00000486524 AIFM3Q96NN9 605 aa13.16□□□□□ -0.3
SLX4-203ENST00000486524 MYL10Q9BUA6 226 aa13.16□□□□□ -0.3
SLX4-203ENST00000486524 TOMM22Q9NS69 142 aa13.16□□□□□ -0.3
SLX4-203ENST00000486524 COL22A1Q8NFW1 1626 aaPredicted RBP13.16□□□□□ -0.3
SLX4-203ENST00000486524 A0A087WWV3 80 aa13.16□□□□□ -0.3
SLX4-203ENST00000486524 ZBTB22O15209 634 aa13.16□□□□□ -0.3
SLX4-203ENST00000486524 ZNF500O60304 480 aaPredicted RBP13.16□□□□□ -0.3
SLX4-203ENST00000486524 CHRNDQ07001 517 aa13.16□□□□□ -0.3
SLX4-203ENST00000486524 PARP10Q53GL7 1025 aa13.16□□□□□ -0.3
SLX4-203ENST00000486524 FBXW7Q969H0 707 aa13.16□□□□□ -0.3
SLX4-203ENST00000486524 NAPBQ9H115 298 aa13.16□□□□□ -0.3
SLX4-203ENST00000486524 DNAJC25Q9H1X3 360 aa13.16□□□□□ -0.3
SLX4-203ENST00000486524 ANGEL1Q9UNK9 670 aaKnown RBP13.16□□□□□ -0.3
SLX4-203ENST00000486524 OFD1O75665 1012 aa13.15□□□□□ -0.3
SLX4-203ENST00000486524 RRP12Q5JTH9 1297 aaKnown RBP13.15□□□□□ -0.3
SLX4-203ENST00000486524 FBXL16Q8N461 479 aa13.15□□□□□ -0.3
SLX4-203ENST00000486524 ERCC4Q92889 916 aaPredicted RBP13.15□□□□□ -0.3
SLX4-203ENST00000486524 AK7Q96M32 723 aa13.15□□□□□ -0.3
SLX4-203ENST00000486524 CBX8Q9HC52 389 aa13.15□□□□□ -0.3
SLX4-203ENST00000486524 EPB41L4AQ9HCS5 686 aaPredicted RBP13.15□□□□□ -0.3
SLX4-203ENST00000486524 RCOR1Q9UKL0 485 aa13.15□□□□□ -0.3
SLX4-203ENST00000486524 R3HCC1Q9Y3T6 440 aaKnown RBP13.15□□□□□ -0.3
SLX4-203ENST00000486524 METAP2P50579 478 aaKnown RBP eCLIP13.15□□□□□ -0.3
SLX4-203ENST00000486524 C3orf67Q6ZVT6 689 aa13.15□□□□□ -0.3
SLX4-203ENST00000486524 IFNL3Q8IZI9 196 aa13.15□□□□□ -0.3
SLX4-203ENST00000486524 C17orf53Q8N3J3 647 aaPredicted RBP13.15□□□□□ -0.3
SLX4-203ENST00000486524 PHKBQ93100 1093 aa13.15□□□□□ -0.3
SLX4-203ENST00000486524 LRP2BPQ9P2M1 347 aa13.15□□□□□ -0.3
SLX4-203ENST00000486524 ERFEQ4G0M1 354 aa13.14□□□□□ -0.31
SLX4-203ENST00000486524 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.14□□□□□ -0.31
SLX4-203ENST00000486524 CCDC73Q6ZRK6 1079 aa13.14□□□□□ -0.31
SLX4-203ENST00000486524 CHMP4CQ96CF2 233 aa13.14□□□□□ -0.31
SLX4-203ENST00000486524 ABCF2Q9UG63 623 aa13.14□□□□□ -0.31
SLX4-203ENST00000486524 PHLPP1O60346 1717 aa13.14□□□□□ -0.31
SLX4-203ENST00000486524 ATRNO75882 1429 aa13.14□□□□□ -0.31
SLX4-203ENST00000486524 RBM10P98175 930 aaKnown RBP13.14□□□□□ -0.31
SLX4-203ENST00000486524 SF3A1Q15459 793 aaKnown RBP13.14□□□□□ -0.31
SLX4-203ENST00000486524 PTF1AQ7RTS3 328 aa13.14□□□□□ -0.31
SLX4-203ENST00000486524 LCORLQ8N3X6 602 aa13.14□□□□□ -0.31
SLX4-203ENST00000486524 FSIP1Q8NA03 581 aa13.14□□□□□ -0.31
SLX4-203ENST00000486524 CLIC4Q9Y696 253 aa13.14□□□□□ -0.31
SLX4-203ENST00000486524 SH2B2O14492 632 aaPredicted RBP13.14□□□□□ -0.31
SLX4-203ENST00000486524 GTF2E1P29083 439 aaPredicted RBP13.14□□□□□ -0.31
SLX4-203ENST00000486524 TDO2P48775 406 aa13.14□□□□□ -0.31
SLX4-203ENST00000486524 KIAA2012Q0VF49 1180 aa13.14□□□□□ -0.31
SLX4-203ENST00000486524 TMEM67Q5HYA8 995 aa13.14□□□□□ -0.31
SLX4-203ENST00000486524 LINC00116Q8NCU8 138 aa13.14□□□□□ -0.31
SLX4-203ENST00000486524 FBXO18Q8NFZ0 1043 aa13.14□□□□□ -0.31
SLX4-203ENST00000486524 ZKSCAN3Q9BRR0 538 aa13.14□□□□□ -0.31
SLX4-203ENST00000486524 KIF28PB7ZC32 967 aa13.13□□□□□ -0.31
SLX4-203ENST00000486524 PATL2C9JE40 543 aaKnown RBP13.13□□□□□ -0.31
SLX4-203ENST00000486524 GYG1P46976 350 aa13.13□□□□□ -0.31
SLX4-203ENST00000486524 HSP90AA2PQ14568 343 aaPredicted RBP13.13□□□□□ -0.31
SLX4-203ENST00000486524 CCDC24Q8N4L8 307 aa13.13□□□□□ -0.31
SLX4-203ENST00000486524 C8orf37Q96NL8 207 aa13.13□□□□□ -0.31
SLX4-203ENST00000486524 ZNF652Q9Y2D9 606 aa13.13□□□□□ -0.31
SLX4-203ENST00000486524 SLC4A4Q9Y6R1 1079 aa13.13□□□□□ -0.31
SLX4-203ENST00000486524 CDC27P30260 824 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms