RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 SRGAP3O43295 1099 aa14.89□□□□□ -0.03
HLA-DOA-204ENST00000485901 CIAO1O76071 339 aa14.89□□□□□ -0.03
HLA-DOA-204ENST00000485901 PDE8BO95263 885 aa14.89□□□□□ -0.03
HLA-DOA-204ENST00000485901 PRAMEF18Q5VWM3 479 aa14.89□□□□□ -0.03
HLA-DOA-204ENST00000485901 ZNF804AQ7Z570 1209 aa14.89□□□□□ -0.03
HLA-DOA-204ENST00000485901 IFNL1Q8IU54 200 aa14.89□□□□□ -0.03
HLA-DOA-204ENST00000485901 FBXW7Q969H0 707 aa14.89□□□□□ -0.03
HLA-DOA-204ENST00000485901 CHMP4BQ9H444 224 aaKnown RBP14.89□□□□□ -0.03
HLA-DOA-204ENST00000485901 COPRSQ9NQ92 184 aa14.89□□□□□ -0.03
HLA-DOA-204ENST00000485901 ANGEL1Q9UNK9 670 aaKnown RBP14.89□□□□□ -0.03
HLA-DOA-204ENST00000485901 IRS2Q9Y4H2 1338 aa14.89□□□□□ -0.03
HLA-DOA-204ENST00000485901 SASH1O94885 1247 aa14.88□□□□□ -0.03
HLA-DOA-204ENST00000485901 PDE3AQ14432 1141 aa14.88□□□□□ -0.03
HLA-DOA-204ENST00000485901 MXD3Q9BW11 206 aa14.88□□□□□ -0.03
HLA-DOA-204ENST00000485901 MKI67P46013 3256 aaKnown RBP14.87□□□□□ -0.03
HLA-DOA-204ENST00000485901 HTTP42858 3142 aa14.87□□□□□ -0.03
HLA-DOA-204ENST00000485901 TESPA1A2RU30 521 aaPredicted RBP14.87□□□□□ -0.03
HLA-DOA-204ENST00000485901 KLRK1P26718 216 aa14.87□□□□□ -0.03
HLA-DOA-204ENST00000485901 IL15P40933 162 aaPredicted RBP14.87□□□□□ -0.03
HLA-DOA-204ENST00000485901 IREB2P48200 963 aaKnown RBP14.87□□□□□ -0.03
HLA-DOA-204ENST00000485901 ATP8B2P98198 1209 aa14.87□□□□□ -0.03
HLA-DOA-204ENST00000485901 TNFAIP1Q13829 316 aa14.87□□□□□ -0.03
HLA-DOA-204ENST00000485901 MVPQ14764 893 aaKnown RBP14.87□□□□□ -0.03
HLA-DOA-204ENST00000485901 ARHGEF6Q15052 776 aa14.87□□□□□ -0.03
HLA-DOA-204ENST00000485901 ERO1AQ96HE7 468 aa14.87□□□□□ -0.03
HLA-DOA-204ENST00000485901 SIL1Q9H173 461 aa14.87□□□□□ -0.03
HLA-DOA-204ENST00000485901 CEP126Q9P2H0 1117 aa14.87□□□□□ -0.03
HLA-DOA-204ENST00000485901 DDX19BQ9UMR2 479 aa14.87□□□□□ -0.03
HLA-DOA-204ENST00000485901 RBBP6Q7Z6E9 1792 aaKnown RBP14.87□□□□□ -0.03
HLA-DOA-204ENST00000485901 CENPFP49454 3210 aa14.87□□□□□ -0.03
HLA-DOA-204ENST00000485901 SPDYE2BA6NHP3 402 aa14.86□□□□□ -0.03
HLA-DOA-204ENST00000485901 SPDYE6P0CI01 402 aa14.86□□□□□ -0.03
HLA-DOA-204ENST00000485901 ATG9AQ7Z3C6 839 aa14.86□□□□□ -0.03
HLA-DOA-204ENST00000485901 ANKRD13AQ8IZ07 590 aa14.86□□□□□ -0.03
HLA-DOA-204ENST00000485901 VGLL2Q8N8G2 317 aa14.86□□□□□ -0.03
HLA-DOA-204ENST00000485901 WNK4Q96J92 1243 aa14.86□□□□□ -0.03
HLA-DOA-204ENST00000485901 SCAF8Q9UPN6 1271 aaKnown RBP14.86□□□□□ -0.03
HLA-DOA-204ENST00000485901 PA2G4Q9UQ80 394 aaKnown RBP14.86□□□□□ -0.03
HLA-DOA-204ENST00000485901 COG6Q9Y2V7 657 aa14.86□□□□□ -0.03
HLA-DOA-204ENST00000485901 IFIT1P09914 478 aaKnown RBP14.85□□□□□ -0.03
HLA-DOA-204ENST00000485901 HIBADHP31937 336 aaKnown RBP14.85□□□□□ -0.03
HLA-DOA-204ENST00000485901 PUM3Q15397 648 aaKnown RBP14.85□□□□□ -0.03
HLA-DOA-204ENST00000485901 CAVIN4Q5BKX8 364 aa14.85□□□□□ -0.03
HLA-DOA-204ENST00000485901 VPS37DQ86XT2 251 aa14.85□□□□□ -0.03
HLA-DOA-204ENST00000485901 FAM205AQ6ZU69 1335 aa14.85□□□□□ -0.03
HLA-DOA-204ENST00000485901 A0A1B0GUL6 1792 aa14.85□□□□□ -0.03
HLA-DOA-204ENST00000485901 PNMA6EA0A0J9YXQ4 647 aa14.84□□□□□ -0.03
HLA-DOA-204ENST00000485901 G3BP1Q13283 466 aaKnown RBP eCLIP14.84□□□□□ -0.03
HLA-DOA-204ENST00000485901 CFAP100Q494V2 611 aa14.84□□□□□ -0.03
HLA-DOA-204ENST00000485901 OTOP1Q7RTM1 612 aa14.84□□□□□ -0.03
HLA-DOA-204ENST00000485901 CERS5Q8N5B7 392 aa14.84□□□□□ -0.03
HLA-DOA-204ENST00000485901 LPIN2Q92539 896 aa14.84□□□□□ -0.03
HLA-DOA-204ENST00000485901 FAM84BQ96KN1 310 aaPredicted RBP14.84□□□□□ -0.03
HLA-DOA-204ENST00000485901 C1orf115Q9H7X2 142 aa14.84□□□□□ -0.03
HLA-DOA-204ENST00000485901 SERPINA10Q9UK55 444 aa14.84□□□□□ -0.03
HLA-DOA-204ENST00000485901 USP2O75604 605 aaPredicted RBP14.83□□□□□ -0.04
HLA-DOA-204ENST00000485901 SLC5A1P13866 664 aa14.83□□□□□ -0.04
HLA-DOA-204ENST00000485901 FGFR2P21802 821 aa14.83□□□□□ -0.04
HLA-DOA-204ENST00000485901 GYG1P46976 350 aa14.83□□□□□ -0.04
HLA-DOA-204ENST00000485901 MKRN3Q13064 507 aaKnown RBP14.83□□□□□ -0.04
HLA-DOA-204ENST00000485901 FBXO33Q7Z6M2 555 aa14.83□□□□□ -0.04
HLA-DOA-204ENST00000485901 SSH3Q8TE77 659 aa14.83□□□□□ -0.04
HLA-DOA-204ENST00000485901 PRMT6Q96LA8 375 aaPredicted RBP14.83□□□□□ -0.04
HLA-DOA-204ENST00000485901 PTPN22Q9Y2R2 807 aa14.83□□□□□ -0.04
HLA-DOA-204ENST00000485901 TRIM17Q9Y577 477 aa14.83□□□□□ -0.04
HLA-DOA-204ENST00000485901 PRKG1Q13976 671 aa14.82□□□□□ -0.04
HLA-DOA-204ENST00000485901 POLA2Q14181 598 aa14.82□□□□□ -0.04
HLA-DOA-204ENST00000485901 C20orf194Q5TEA3 1177 aa14.82□□□□□ -0.04
HLA-DOA-204ENST00000485901 TDRD7Q8NHU6 1098 aaKnown RBP14.82□□□□□ -0.04
HLA-DOA-204ENST00000485901 ARMC5Q96C12 935 aa14.82□□□□□ -0.04
HLA-DOA-204ENST00000485901 MRIQ9BWK5 157 aa14.82□□□□□ -0.04
HLA-DOA-204ENST00000485901 R3HDMLQ9H3Y0 253 aa14.82□□□□□ -0.04
HLA-DOA-204ENST00000485901 ZBTB40Q9NUA8 1239 aa14.82□□□□□ -0.04
HLA-DOA-204ENST00000485901 AKAP2Q9Y2D5 859 aa14.82□□□□□ -0.04
HLA-DOA-204ENST00000485901 SSC5DA1L4H1 1573 aa14.81□□□□□ -0.04
HLA-DOA-204ENST00000485901 IGF2BP3O00425 579 aaKnown RBP eCLIP14.81□□□□□ -0.04
HLA-DOA-204ENST00000485901 FRAT2O75474 233 aaPredicted RBP14.81□□□□□ -0.04
HLA-DOA-204ENST00000485901 HDLBPQ00341 1268 aaKnown RBP14.81□□□□□ -0.04
HLA-DOA-204ENST00000485901 SP3Q02447 781 aa14.81□□□□□ -0.04
HLA-DOA-204ENST00000485901 RASA3Q14644 834 aa14.81□□□□□ -0.04
HLA-DOA-204ENST00000485901 ATP2B3Q16720 1220 aa14.81□□□□□ -0.04
HLA-DOA-204ENST00000485901 SPDYE2Q495Y8 402 aa14.81□□□□□ -0.04
HLA-DOA-204ENST00000485901 RPAP2Q8IXW5 612 aaPredicted RBP14.81□□□□□ -0.04
HLA-DOA-204ENST00000485901 ZCCHC17Q9NP64 241 aaKnown RBP14.81□□□□□ -0.04
HLA-DOA-204ENST00000485901 SURF6O75683 361 aaKnown RBP14.8□□□□□ -0.04
HLA-DOA-204ENST00000485901 WDHD1O75717 1129 aaPredicted RBP14.8□□□□□ -0.04
HLA-DOA-204ENST00000485901 TNNI2P48788 182 aa14.8□□□□□ -0.04
HLA-DOA-204ENST00000485901 BCAMP50895 628 aa14.8□□□□□ -0.04
HLA-DOA-204ENST00000485901 NBPF12Q5TAG4 269 aaPredicted RBP14.8□□□□□ -0.04
HLA-DOA-204ENST00000485901 CEP85Q6P2H3 762 aa14.8□□□□□ -0.04
HLA-DOA-204ENST00000485901 EFCC1Q9HA90 598 aa14.8□□□□□ -0.04
HLA-DOA-204ENST00000485901 BRCA2P51587 3418 aa14.8□□□□□ -0.04
HLA-DOA-204ENST00000485901 GNRH1P01148 92 aa14.79□□□□□ -0.04
HLA-DOA-204ENST00000485901 GTF2A2P52657 109 aa14.79□□□□□ -0.04
HLA-DOA-204ENST00000485901 RRP1P56182 461 aaKnown RBP14.79□□□□□ -0.04
HLA-DOA-204ENST00000485901 TFCP2Q12800 502 aa14.79□□□□□ -0.04
HLA-DOA-204ENST00000485901 CRHR2Q13324 411 aa14.79□□□□□ -0.04
HLA-DOA-204ENST00000485901 NBPF11Q86T75 865 aa14.79□□□□□ -0.04
HLA-DOA-204ENST00000485901 TBC1D22AQ8WUA7 517 aa14.79□□□□□ -0.04
HLA-DOA-204ENST00000485901 HOOK2Q96ED9 719 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms