RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 APOBEC3FQ8IUX4 373 aaKnown RBP11.89□□□□□ -0.51
HMG20B-210ENST00000483417 CSRNP1Q96S65 589 aa11.89□□□□□ -0.51
HMG20B-210ENST00000483417 BEGAINQ9BUH8 593 aa11.89□□□□□ -0.51
HMG20B-210ENST00000483417 CHMP4BQ9H444 224 aaKnown RBP11.89□□□□□ -0.51
HMG20B-210ENST00000483417 F8W031 263 aaPredicted RBP11.88□□□□□ -0.51
HMG20B-210ENST00000483417 SMARCA5O60264 1052 aaPredicted RBP11.88□□□□□ -0.51
HMG20B-210ENST00000483417 CIAO1O76071 339 aa11.88□□□□□ -0.51
HMG20B-210ENST00000483417 G3BP1Q13283 466 aaKnown RBP eCLIP11.88□□□□□ -0.51
HMG20B-210ENST00000483417 MFSD14BQ5SR56 506 aa11.88□□□□□ -0.51
HMG20B-210ENST00000483417 LDLRAD1Q5T700 205 aa11.88□□□□□ -0.51
HMG20B-210ENST00000483417 RASAL3Q86YV0 1011 aa11.88□□□□□ -0.51
HMG20B-210ENST00000483417 BCL11AQ9H165 835 aa11.88□□□□□ -0.51
HMG20B-210ENST00000483417 DEFB129Q9H1M3 183 aa11.88□□□□□ -0.51
HMG20B-210ENST00000483417 DCTPP1Q9H773 170 aa11.88□□□□□ -0.51
HMG20B-210ENST00000483417 TSKSQ9UJT2 592 aa11.88□□□□□ -0.51
HMG20B-210ENST00000483417 PAPPA2Q9BXP8 1791 aa11.87□□□□□ -0.51
HMG20B-210ENST00000483417 IL15P40933 162 aaPredicted RBP11.87□□□□□ -0.51
HMG20B-210ENST00000483417 BCAMP50895 628 aa11.87□□□□□ -0.51
HMG20B-210ENST00000483417 CEP126Q9P2H0 1117 aa11.87□□□□□ -0.51
HMG20B-210ENST00000483417 FBXO3Q9UK99 471 aa11.87□□□□□ -0.51
HMG20B-210ENST00000483417 ADORA1P30542 326 aa11.86□□□□□ -0.51
HMG20B-210ENST00000483417 PUM3Q15397 648 aaKnown RBP11.86□□□□□ -0.51
HMG20B-210ENST00000483417 MAP3K11Q16584 847 aa11.86□□□□□ -0.51
HMG20B-210ENST00000483417 CAVIN4Q5BKX8 364 aa11.86□□□□□ -0.51
HMG20B-210ENST00000483417 MRIQ9BWK5 157 aa11.86□□□□□ -0.51
HMG20B-210ENST00000483417 IL1RAPL2Q9NP60 686 aa11.86□□□□□ -0.51
HMG20B-210ENST00000483417 RNF186Q9NXI6 227 aa11.86□□□□□ -0.51
HMG20B-210ENST00000483417 SERPINA10Q9UK55 444 aa11.86□□□□□ -0.51
HMG20B-210ENST00000483417 TTF2Q9UNY4 1162 aaKnown RBP11.86□□□□□ -0.51
HMG20B-210ENST00000483417 IQSEC3Q9UPP2 1182 aaPredicted RBP11.86□□□□□ -0.51
HMG20B-210ENST00000483417 COL1A1P02452 1464 aaPredicted RBP11.85□□□□□ -0.51
HMG20B-210ENST00000483417 CLRN2A0PK11 232 aa11.85□□□□□ -0.51
HMG20B-210ENST00000483417 ZBTB22O15209 634 aa11.85□□□□□ -0.51
HMG20B-210ENST00000483417 HDLBPQ00341 1268 aaKnown RBP11.85□□□□□ -0.51
HMG20B-210ENST00000483417 SPDYE2Q495Y8 402 aa11.85□□□□□ -0.51
HMG20B-210ENST00000483417 REM2Q8IYK8 340 aaPredicted RBP11.85□□□□□ -0.51
HMG20B-210ENST00000483417 LPIN2Q92539 896 aa11.85□□□□□ -0.51
HMG20B-210ENST00000483417 EAF2Q96CJ1 260 aaPredicted RBP11.85□□□□□ -0.51
HMG20B-210ENST00000483417 CCDC8Q9H0W5 538 aaPredicted RBP11.85□□□□□ -0.51
HMG20B-210ENST00000483417 SAGE1Q9NXZ1 904 aa11.85□□□□□ -0.51
HMG20B-210ENST00000483417 PPP2R3BQ9Y5P8 575 aa11.85□□□□□ -0.51
HMG20B-210ENST00000483417 SSC5DA1L4H1 1573 aa11.84□□□□□ -0.51
HMG20B-210ENST00000483417 MYO1BO43795 1136 aa11.84□□□□□ -0.51
HMG20B-210ENST00000483417 HMMRO75330 724 aa11.84□□□□□ -0.51
HMG20B-210ENST00000483417 CAPN15O75808 1086 aa11.84□□□□□ -0.51
HMG20B-210ENST00000483417 IFIT1P09914 478 aaKnown RBP11.84□□□□□ -0.51
HMG20B-210ENST00000483417 NF2P35240 595 aa11.84□□□□□ -0.51
HMG20B-210ENST00000483417 CRKP46108 304 aa11.84□□□□□ -0.51
HMG20B-210ENST00000483417 TM4SF4P48230 202 aa11.84□□□□□ -0.51
HMG20B-210ENST00000483417 OS9Q13438 667 aaPredicted RBP11.84□□□□□ -0.51
HMG20B-210ENST00000483417 HDAC1Q13547 482 aaPredicted RBP11.84□□□□□ -0.51
HMG20B-210ENST00000483417 RASA3Q14644 834 aa11.84□□□□□ -0.51
HMG20B-210ENST00000483417 NBPF12Q5TAG4 269 aaPredicted RBP11.84□□□□□ -0.51
HMG20B-210ENST00000483417 VPS37DQ86XT2 251 aa11.84□□□□□ -0.51
HMG20B-210ENST00000483417 RHPN1Q8TCX5 695 aa11.84□□□□□ -0.51
HMG20B-210ENST00000483417 TBC1D22AQ8WUA7 517 aa11.84□□□□□ -0.51
HMG20B-210ENST00000483417 NEUROD6Q96NK8 337 aa11.84□□□□□ -0.51
HMG20B-210ENST00000483417 TDRD3Q9H7E2 651 aaKnown RBP11.84□□□□□ -0.51
HMG20B-210ENST00000483417 ZNF70Q9UC06 446 aaPredicted RBP11.84□□□□□ -0.51
HMG20B-210ENST00000483417 FZD1Q9UP38 647 aa11.84□□□□□ -0.51
HMG20B-210ENST00000483417 USP2O75604 605 aaPredicted RBP11.83□□□□□ -0.52
HMG20B-210ENST00000483417 TRPA1O75762 1119 aa11.83□□□□□ -0.52
HMG20B-210ENST00000483417 RBM5P52756 815 aaKnown RBP eCLIP11.83□□□□□ -0.52
HMG20B-210ENST00000483417 CHAF1AQ13111 956 aaPredicted RBP11.83□□□□□ -0.52
HMG20B-210ENST00000483417 B4GALNT3Q6L9W6 998 aa11.83□□□□□ -0.52
HMG20B-210ENST00000483417 ARMC9Q7Z3E5 817 aa11.83□□□□□ -0.52
HMG20B-210ENST00000483417 TEPSINQ96N21 525 aa11.83□□□□□ -0.52
HMG20B-210ENST00000483417 RWDD1Q9H446 243 aaPredicted RBP11.83□□□□□ -0.52
HMG20B-210ENST00000483417 TLR7Q9NYK1 1049 aaKnown RBP11.83□□□□□ -0.52
HMG20B-210ENST00000483417 ANGEL1Q9UNK9 670 aaKnown RBP11.83□□□□□ -0.52
HMG20B-210ENST00000483417 SUGT1Q9Y2Z0 365 aa11.83□□□□□ -0.52
HMG20B-210ENST00000483417 ECM29Q5VYK3 1845 aa11.83□□□□□ -0.52
HMG20B-210ENST00000483417 A0A1B0GUL7 405 aa11.82□□□□□ -0.52
HMG20B-210ENST00000483417 UNCXA6NJT0 531 aa11.82□□□□□ -0.52
HMG20B-210ENST00000483417 SLC5A1P13866 664 aa11.82□□□□□ -0.52
HMG20B-210ENST00000483417 AAMPQ13685 434 aa11.82□□□□□ -0.52
HMG20B-210ENST00000483417 PRKG1Q13976 671 aa11.82□□□□□ -0.52
HMG20B-210ENST00000483417 TTLL12Q14166 644 aaPredicted RBP11.82□□□□□ -0.52
HMG20B-210ENST00000483417 ATP2B3Q16720 1220 aa11.82□□□□□ -0.52
HMG20B-210ENST00000483417 SUPT20HL1Q3ZLR7 823 aa11.82□□□□□ -0.52
HMG20B-210ENST00000483417 TNNI3KQ59H18 835 aa11.82□□□□□ -0.52
HMG20B-210ENST00000483417 APOBEC3HQ6NTF7 200 aaKnown RBP11.82□□□□□ -0.52
HMG20B-210ENST00000483417 XAGE2Q96GT9 111 aa11.82□□□□□ -0.52
HMG20B-210ENST00000483417 ABHD8Q96I13 439 aa11.82□□□□□ -0.52
HMG20B-210ENST00000483417 ZDHHC15Q96MV8 337 aa11.82□□□□□ -0.52
HMG20B-210ENST00000483417 DBNDD2Q9BQY9 259 aa11.82□□□□□ -0.52
HMG20B-210ENST00000483417 VEZTQ9HBM0 779 aa11.82□□□□□ -0.52
HMG20B-210ENST00000483417 FPGT-TNNI3KV9GXZ4 949 aa11.82□□□□□ -0.52
HMG20B-210ENST00000483417 RAB11FIP3O75154 756 aa11.81□□□□□ -0.52
HMG20B-210ENST00000483417 FRAT2O75474 233 aaPredicted RBP11.81□□□□□ -0.52
HMG20B-210ENST00000483417 PHKA1P46020 1223 aa11.81□□□□□ -0.52
HMG20B-210ENST00000483417 ANKRD45Q5TZF3 282 aa11.81□□□□□ -0.52
HMG20B-210ENST00000483417 SPRYD7Q5W111 196 aa11.81□□□□□ -0.52
HMG20B-210ENST00000483417 HHIPL2Q6UWX4 724 aa11.81□□□□□ -0.52
HMG20B-210ENST00000483417 SKAP1Q86WV1 359 aa11.81□□□□□ -0.52
HMG20B-210ENST00000483417 CDAN1Q8IWY9 1227 aa11.81□□□□□ -0.52
HMG20B-210ENST00000483417 WDR66Q8TBY9 1149 aa11.81□□□□□ -0.52
HMG20B-210ENST00000483417 OTUD7AQ8TE49 926 aaPredicted RBP11.81□□□□□ -0.52
HMG20B-210ENST00000483417 ARAP2Q8WZ64 1704 aa11.8□□□□□ -0.52
HMG20B-210ENST00000483417 PPP1R12BO60237 982 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms